Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	PAFAH1B1	Gene	0	220.26	670.06	255.89	427.24	630.58	1126.90	463.77	545.87	630.08	520.49	298.33	459.33	288.75	345.59	241.43	284.01	290.51	479.63	109.57	558.10	216.07	295.23	195.47
2	397195	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
3	451360	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.95	5.61	2.00	5.70	0.00	5.00	0.00	0.00	8.88	2.07	0.00	2.88	0.00	0.00	3.24
4	6951	Transcript	0	0.00	0.00	0.00	0.91	0.89	0.46	0.22	0.00	0.10	0.29	0.16	0.00	1.95	0.27	0.00	0.00	0.00	0.31	0.27	0.35	0.92	0.00	0.00
5	397193	Transcript	0	0.00	0.06	0.00	0.00	0.00	0.00	0.21	0.00	0.00	0.00	0.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	ER1a	ExonRegion	1	0.00	0.41	2.73	5.35	0.00	4.99	1.76	10.62	33.82	39.80	170.18	11.85	11.69	25.72	33.51	59.87	201.77	47.60	23.86	29.21	213.80	16.21	53.13
7	E1_Ab	KnownBoundary	1	0.00	3.35	10.14	18.05	0.00	2.56	0.00	27.23	58.68	60.17	70.75	50.27	13.96	14.13	5.19	18.97	125.20	63.51	8.38	9.84	57.64	0.00	3.33
8	ER1b	ExonRegion	1	3.83	16.16	9.55	13.81	8.70	42.96	12.52	18.89	51.15	56.68	104.65	21.41	22.67	87.33	50.06	104.14	187.01	58.13	35.71	85.16	120.43	35.20	83.34
9	E1a_E2a	KnownJunction	0	21.11	81.10	65.73	98.36	27.08	287.16	100.07	91.68	234.84	214.60	55.86	48.47	40.58	160.10	96.92	82.88	113.98	53.35	30.12	262.70	22.55	99.50	65.47
10	ER2a	ExonRegion	0	57.05	185.05	114.11	148.98	230.67	425.20	254.46	239.20	420.24	325.86	414.60	423.51	320.72	415.96	236.48	245.64	389.09	239.90	81.00	437.77	176.01	240.73	136.63
11	E2a_E4a	KnownJunction	0	78.16	210.29	134.86	156.02	227.16	460.02	190.34	286.78	500.95	400.08	341.14	756.40	470.10	505.80	259.72	290.95	384.67	322.34	87.16	486.67	136.03	342.85	186.77
12	E2a_E5a	NovelJunction	0	0.00	0.00	9.91	0.00	4.07	15.73	10.29	9.86	13.83	7.47	16.64	61.22	6.66	35.73	23.12	19.31	17.58	16.91	0.00	20.90	0.00	9.06	3.84
13	I2_AR2	ActiveIntronRegion	0	32.81	35.59	58.57	76.59	52.18	32.46	32.97	52.03	62.87	47.25	5.41	21.21	10.79	10.72	48.16	43.99	21.79	62.64	8.60	61.49	17.19	20.63	33.77
14	I2_AR3	ActiveIntronRegion	0	51.22	36.81	52.57	68.69	62.61	45.84	47.93	48.40	51.26	57.57	7.35	22.51	22.51	11.04	44.97	53.20	36.31	70.21	21.34	77.02	15.65	16.25	49.04
15	I2_SR3	SilentIntronRegion	0	56.90	45.10	47.43	90.99	104.20	43.15	78.04	60.29	51.73	36.90	6.14	30.56	17.93	4.01	17.24	24.30	30.29	14.35	5.25	34.54	8.04	25.49	30.58
16	E3_Aa	NovelBoundary	0	295.16	297.64	327.78	354.53	342.19	205.90	372.47	271.79	287.93	260.27	134.09	234.98	192.84	219.14	436.99	352.81	281.16	376.69	353.14	373.85	134.37	119.34	319.17
17	ER3a	ExonRegion	0	0.00	0.06	0.00	0.00	0.00	0.00	0.21	0.00	0.00	0.00	0.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER4a	ExonRegion	0	61.60	204.72	149.90	182.02	310.04	688.77	336.61	322.00	526.12	398.12	463.37	994.15	568.27	543.35	297.46	342.95	421.27	339.96	133.11	582.60	142.96	396.63	169.67
19	E4a_E5a	KnownJunction	0	71.35	312.25	195.94	241.79	462.82	1106.92	477.31	355.99	665.91	480.02	554.35	1252.91	675.28	634.83	397.80	426.73	442.17	357.70	159.63	734.09	201.58	493.24	205.13
20	ER5a	ExonRegion	0	75.43	308.07	142.21	215.95	462.48	993.50	444.80	355.62	603.63	429.78	617.06	1214.39	695.00	726.89	350.97	443.44	471.28	403.55	105.03	579.46	205.44	427.98	247.19
21	E5a_E6a	KnownJunction	0	78.09	349.87	134.38	220.15	500.59	890.68	461.81	385.19	550.72	412.22	510.81	1139.62	692.16	737.66	315.47	499.36	457.50	364.29	78.87	556.65	161.73	338.19	200.09
22	ER6a	ExonRegion	0	132.36	399.17	168.43	205.12	360.77	808.06	451.34	390.46	636.85	459.38	584.12	1087.74	504.67	747.37	382.31	535.26	554.61	668.01	146.91	596.53	367.75	389.10	288.90
23	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	E6a_E8a	KnownJunction	0	94.61	426.70	182.87	199.77	365.87	894.94	425.07	361.53	616.54	417.09	511.76	671.77	303.88	748.02	492.62	524.91	497.62	582.67	195.77	643.90	416.26	363.85	260.96
25	E7a_E8b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER7a	ExonRegion	0	0.00	0.00	0.00	2.73	2.68	1.38	0.66	0.00	0.31	0.86	0.48	0.00	5.86	0.81	0.00	0.00	0.00	0.92	0.80	1.06	2.75	0.00	0.00
27	ER8a	ExonRegion	0	152.99	449.56	202.95	241.00	422.08	933.42	446.25	391.85	677.86	443.55	570.07	828.69	489.59	784.59	487.67	633.51	547.04	842.52	170.80	714.93	432.12	407.91	341.79
28	E8_Ab	KnownBoundary	0	184.92	463.54	237.87	256.34	389.56	1053.88	547.49	424.95	738.94	430.30	485.44	960.31	543.63	862.80	533.04	681.70	576.62	827.33	138.36	717.09	399.33	359.07	366.21
29	ER8b	ExonRegion	0	134.25	394.51	186.85	218.60	398.35	950.43	465.63	375.17	671.73	405.21	521.19	659.08	429.22	714.76	499.74	563.43	553.67	687.59	170.99	670.51	444.80	381.88	309.40
30	E8a_E9a	KnownJunction	0	184.03	378.29	167.44	203.74	337.44	889.94	411.91	353.11	651.64	423.64	440.74	452.10	311.99	560.19	542.06	417.67	448.25	543.95	169.98	676.56	412.80	364.46	211.70
31	Ix	Intron	0	25.49	101.65	58.39	86.73	50.36	36.37	38.18	49.25	43.21	27.68	12.71	39.10	23.17	13.75	17.86	15.04	11.36	34.27	10.95	45.64	6.47	21.72	17.53
32	Ix_AR1	ActiveIntronRegion	0	29.09	135.00	87.67	125.77	69.81	47.75	50.83	68.73	61.11	39.64	15.32	56.38	31.52	14.74	21.33	15.94	12.83	39.63	11.46	54.63	4.60	26.14	20.64
33	E9_Aa	NovelBoundary	0	51.12	243.31	108.22	144.60	106.62	75.58	83.86	64.16	69.01	62.91	26.43	75.77	32.14	23.66	29.67	16.66	11.97	82.74	34.07	121.70	16.87	8.63	51.56
34	ER9a	ExonRegion	0	186.11	401.05	185.52	214.69	378.42	865.48	385.92	333.74	582.89	383.70	511.94	590.61	454.80	680.71	477.44	561.18	491.06	721.48	173.49	690.02	407.30	365.30	317.01
35	E9_Da	NovelBoundary	0	66.60	142.28	98.99	84.57	74.70	101.87	115.35	61.45	56.54	45.21	39.64	71.42	61.85	42.85	25.47	43.24	34.69	120.84	30.21	80.79	41.45	20.51	44.47
36	E9a_E10a	KnownJunction	0	365.25	517.14	181.99	211.99	428.95	972.74	456.51	339.72	568.89	388.37	551.30	581.59	482.60	587.91	524.51	524.82	597.94	658.86	174.22	720.41	543.70	343.09	277.60
37	I9	Intron	0	46.98	87.07	59.80	119.24	72.44	75.63	77.11	87.98	75.92	66.45	25.55	59.45	56.93	28.99	26.59	29.94	23.38	51.85	10.03	80.38	9.36	53.80	28.66
38	I9_AR1	ActiveIntronRegion	0	47.27	87.60	60.17	119.96	72.89	76.10	77.59	88.52	76.39	66.86	25.71	59.81	57.29	29.17	26.71	30.13	23.53	52.17	10.08	80.88	9.42	54.14	28.83
39	E10_Aa	NovelBoundary	0	78.16	110.38	126.34	242.96	85.06	76.43	118.49	127.45	131.22	124.53	39.75	121.39	93.99	47.85	8.90	65.54	44.32	171.99	17.41	146.05	32.99	70.60	57.88
40	ER10a	ExonRegion	0	220.05	508.44	261.85	325.84	385.61	848.52	398.71	392.21	618.95	466.64	531.14	630.42	314.01	649.95	587.12	530.95	577.08	983.66	146.36	768.31	478.23	372.09	328.93
41	E10_Da	NovelBoundary	0	21.19	81.76	64.78	74.92	46.77	83.76	95.74	83.42	66.17	52.89	52.54	63.02	51.94	33.49	45.49	66.56	48.99	151.64	43.11	118.31	40.09	67.30	50.36
42	E10a_E11a	KnownJunction	0	211.82	439.33	272.79	359.10	597.79	1194.26	395.48	418.34	670.07	507.80	566.67	833.97	372.38	831.48	872.74	796.37	628.24	1109.75	178.83	905.64	419.59	521.46	426.64
43	E10a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.95	5.61	2.00	5.70	0.00	5.00	0.00	0.00	8.88	2.07	0.00	2.88	0.00	0.00	3.24
44	I10	Intron	0	25.71	72.16	39.46	45.83	82.41	71.75	82.40	51.22	48.73	40.90	27.44	55.47	36.54	27.71	23.49	33.00	26.28	71.65	19.56	69.01	13.13	42.84	40.88
45	I10_SR1	SilentIntronRegion	0	25.88	73.69	41.57	47.95	82.99	73.29	85.42	54.42	51.78	43.58	28.63	56.91	39.14	27.51	23.31	34.13	27.73	75.49	20.43	70.64	12.92	43.18	41.02
46	I10_AR1	ActiveIntronRegion	0	24.37	56.85	17.00	23.37	77.77	56.32	50.82	16.95	16.12	12.17	14.84	40.78	8.62	30.56	26.02	21.19	10.86	30.74	10.48	52.48	15.71	39.97	40.23
47	ER11a	ExonRegion	0	166.50	460.79	256.64	352.37	432.89	932.81	374.97	501.32	707.61	507.53	664.48	560.50	318.14	732.02	738.97	635.83	618.59	1022.39	148.62	820.44	471.79	436.33	348.88
48	E11a_E12a	KnownJunction	0	172.70	573.38	215.78	312.55	432.09	1046.95	460.62	408.69	653.00	463.96	478.59	557.43	216.38	558.72	677.67	429.37	478.73	891.25	148.71	702.00	325.26	387.49	261.81
49	ER12a	ExonRegion	0	286.86	545.57	235.40	349.55	528.66	1141.16	487.12	484.11	679.71	484.04	601.86	474.83	283.73	643.61	669.67	672.10	586.17	1113.76	179.78	789.79	462.74	378.83	388.18
50	E12a_E13a	KnownJunction	0	217.82	566.02	174.15	211.66	423.85	1106.41	446.13	429.80	593.86	446.07	497.28	291.09	226.45	596.21	390.51	412.54	498.27	759.84	150.59	669.34	449.86	351.30	307.22
51	I12_AR1	ActiveIntronRegion	1	27.78	60.83	37.43	57.20	92.20	73.28	77.39	55.85	62.57	46.76	59.79	38.06	50.83	30.61	31.97	66.97	28.70	98.14	18.81	61.72	26.23	35.58	37.25
52	I12_SR1	SilentIntronRegion	0	40.40	78.31	50.57	69.85	105.35	82.43	99.14	64.79	69.34	62.06	43.30	46.97	44.72	28.24	29.53	49.97	31.55	61.59	9.93	63.79	14.26	47.91	37.21
53	I12_AR1	ActiveIntronRegion	0	27.30	34.80	33.61	46.01	69.04	59.60	58.28	55.84	58.22	40.62	33.82	17.48	20.09	42.73	26.59	42.58	28.61	100.01	21.44	59.94	19.80	34.81	27.20
54	ER13a	ExonRegion	0	148.92	372.20	172.07	255.79	369.57	881.66	314.57	386.92	556.96	420.29	347.57	396.74	262.67	464.90	369.87	396.64	372.54	754.26	137.66	583.62	350.93	261.10	273.04
55	E13_Da	KnownBoundary	1	142.03	432.29	139.17	260.41	757.30	1410.44	450.55	422.69	647.07	446.34	298.23	453.90	247.55	415.45	118.67	295.14	257.97	563.85	137.32	663.40	231.79	253.08	232.87
56	ER13b	ExonRegion	0	272.24	859.62	310.95	547.37	804.47	1371.69	546.48	675.34	710.08	611.01	228.48	419.36	276.68	262.28	175.41	220.84	215.54	429.09	105.47	576.20	165.24	301.01	173.69