Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC040169.6 Gene 0 1.85 0.79 1.42 0.79 1.56 1.07 2.70 1.50 1.97 2.66 0.75 1.19 1.66 4.62 2.75 4.04 3.21 3.21 4.95 10.33 6.21 0.81 5.14 2 424377 Transcript 0 0.66 0.29 0.52 0.27 0.58 0.40 0.98 0.53 0.80 1.02 0.29 0.46 0.64 1.69 1.05 1.46 1.18 1.05 1.72 3.81 2.26 0.29 1.95 3 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.01 1.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 Ix_AR1 ActiveIntronRegion 0 1.97 0.00 0.57 0.95 18.72 2.00 1.03 1.60 2.00 2.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.97 0.99 0.00 5.84 3.65 8 Ix_AR1 ActiveIntronRegion 0 10.58 0.34 2.28 0.51 4.40 1.62 0.22 5.57 2.34 2.97 0.16 0.00 0.00 0.45 0.34 0.00 0.00 0.46 0.53 0.00 0.00 3.86 3.59 9 Ix_AR4 ActiveIntronRegion 0 11.69 0.00 0.00 0.00 1.38 5.43 0.00 1.07 0.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.36 0.00 10 Ix_SR1 SilentIntronRegion 0 0.00 2.03 4.90 0.00 16.39 2.52 8.77 12.96 15.90 9.89 1.93 0.00 0.00 1.62 0.00 0.00 0.00 1.85 3.19 2.13 4.13 4.17 2.94 11 Ix_AR2 ActiveIntronRegion 0 0.00 2.03 4.90 0.00 24.08 4.28 11.47 15.84 17.70 11.28 1.93 0.00 0.00 1.62 0.00 0.00 0.00 1.85 5.84 2.13 5.14 7.99 2.94 12 Ix_SR2 SilentIntronRegion 0 2.89 9.64 5.11 2.93 29.87 17.74 14.48 28.37 34.40 23.58 3.03 1.53 0.00 1.60 1.67 1.35 0.75 10.75 11.72 14.97 7.39 6.65 6.79 13 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 Ix_AR2 ActiveIntronRegion 0 11.67 3.02 1.16 3.88 10.21 2.33 10.97 3.80 1.57 2.91 0.82 3.25 11.96 2.72 7.22 6.32 4.91 0.00 2.04 3.62 1.87 2.66 1.87 16 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER4a ExonRegion 0 0.00 0.00 0.10 0.06 0.00 0.00 0.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.27 0.00 0.00 0.00 18 E5_Aa NovelBoundary 0 34.01 14.87 30.42 14.02 24.45 17.21 27.82 25.84 44.94 35.89 5.16 7.65 6.49 31.96 10.75 30.16 17.58 28.52 23.06 90.70 55.41 8.63 32.86 19 ER5a ExonRegion 0 6.21 2.96 5.30 1.96 6.50 4.45 9.62 4.99 4.47 5.81 3.76 5.94 8.31 15.38 8.79 14.46 12.83 4.91 13.92 41.28 23.57 3.04 24.28 20 E5_Da NovelBoundary 0 19.11 11.71 8.90 10.12 11.54 7.78 11.84 13.64 22.51 43.09 2.58 0.00 0.00 11.83 10.51 27.51 33.19 36.81 48.75 68.71 31.94 10.78 18.52 21 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.77 1.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E6_Aa NovelBoundary 0 32.82 0.00 23.42 9.69 7.72 2.90 11.17 39.35 33.82 49.67 5.16 13.50 29.87 7.77 5.93 8.54 23.09 76.27 64.75 47.68 42.19 0.00 33.55 23 ER6a ExonRegion 0 2.37 0.77 1.38 1.53 1.01 0.69 3.00 1.96 4.17 5.75 0.00 0.00 0.00 5.51 3.07 4.40 2.49 8.64 8.42 8.04 5.76 0.79 1.11 24 E6_Da NovelBoundary 0 6.52 9.67 3.84 3.36 0.00 0.00 2.25 11.09 8.51 20.58 0.00 0.00 0.00 7.18 0.00 3.59 3.74 6.22 4.05 15.08 8.46 2.39 3.50 25 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 Ix_SR4 SilentIntronRegion 0 9.27 10.60 13.04 8.32 9.56 2.30 6.95 6.47 6.54 12.74 1.17 2.00 4.56 3.08 4.60 3.94 3.25 5.21 8.63 8.31 2.46 3.19 3.68 27 Ix_AR4 ActiveIntronRegion 0 10.05 13.97 21.33 14.81 11.60 2.67 6.32 10.73 9.90 16.40 0.80 4.06 7.40 5.53 6.07 6.76 5.84 8.00 7.74 8.90 2.47 4.55 8.25 28 ER7a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.13 0.00 0.00 0.00 0.10 0.05 0.14 0.00 0.09 0.00 0.00 0.10 0.00 0.00