Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TMEM231 Gene 0 14.39 28.73 68.58 19.70 25.82 26.91 26.89 19.23 37.60 26.36 49.45 18.50 29.92 29.10 30.62 46.86 28.13 44.13 61.69 37.76 47.07 34.45 39.72 2 258173 Transcript 0 0.54 0.00 12.65 1.73 1.91 0.76 1.60 3.04 1.46 3.16 15.41 0.31 0.60 10.05 4.95 3.28 8.43 9.84 10.59 11.98 15.62 6.47 2.51 3 398114 Transcript 0 0.00 0.00 4.06 0.71 1.39 2.45 0.01 0.92 1.93 0.66 1.26 0.00 0.00 1.54 0.06 1.27 2.12 1.72 3.64 0.20 1.33 0.09 0.39 4 ER1a ExonRegion 0 1.09 0.00 0.00 0.00 0.00 1.52 1.21 0.00 0.00 0.00 2.65 0.62 1.21 1.21 0.99 2.21 2.55 0.16 0.00 0.00 5.10 1.55 0.67 5 E1_Ab KnownBoundary 0 3.56 5.46 4.02 1.53 0.00 8.01 5.70 0.00 1.56 2.85 9.42 0.00 6.33 2.12 4.33 8.12 8.98 8.08 4.24 0.00 13.90 2.94 0.00 6 ER1b ExonRegion 0 1.71 3.11 13.34 0.60 4.90 9.21 3.09 1.29 1.44 3.10 13.95 1.19 2.11 8.04 6.76 6.26 12.22 16.22 10.22 5.87 18.14 2.82 9.13 7 E1_Da KnownBoundary 0 0.00 0.00 4.76 1.93 0.00 0.00 0.00 2.42 0.00 1.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.68 0.00 0.00 3.15 0.00 3.67 8 E1a_E1c KnownJunction 0 0.00 0.00 25.31 3.46 3.82 0.00 1.99 6.08 2.92 6.31 28.17 0.00 0.00 18.89 8.90 4.36 14.31 19.52 21.18 23.97 26.13 11.39 4.35 9 ER1c ExonRegion 0 0.00 0.00 4.06 0.71 1.39 2.45 0.01 0.92 1.93 0.66 1.26 0.00 0.00 1.54 0.06 1.27 2.12 1.72 3.64 0.20 1.33 0.09 0.39 10 E1_Ac KnownBoundary 0 0.00 0.00 6.53 0.00 0.00 5.79 0.00 0.00 1.71 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.90 0.00 0.00 11 ER1d ExonRegion 0 1.28 5.46 24.48 4.26 3.10 11.66 7.91 5.48 8.22 9.87 26.53 5.79 5.49 22.45 16.70 19.66 21.76 23.50 41.33 20.57 31.67 12.75 20.77 12 E1b_E2a KnownJunction 0 0.00 6.71 21.85 2.03 6.79 18.51 28.18 9.57 8.16 13.48 39.90 24.16 13.47 19.25 24.35 11.79 29.83 9.87 37.93 11.76 62.77 8.70 11.87 13 I1 Intron 0 3.06 4.86 9.24 6.47 14.42 2.07 6.50 3.31 16.79 6.03 2.44 4.29 6.46 3.16 2.96 5.93 3.92 2.98 4.56 5.37 1.67 2.48 5.57 14 I1_SR2 SilentIntronRegion 0 3.39 5.16 9.21 7.19 15.77 1.93 7.01 3.41 17.91 6.35 2.32 4.70 7.62 3.07 2.76 6.19 3.84 2.64 3.78 5.27 1.19 2.55 5.64 15 I1_AR2 ActiveIntronRegion 0 6.61 12.95 23.38 12.96 35.84 9.09 12.95 10.16 52.30 19.53 5.53 10.72 3.50 7.59 7.94 9.79 11.26 12.53 27.60 17.09 5.13 7.84 7.32 16 E2_Aa NovelBoundary 0 13.93 6.31 41.60 23.21 50.08 4.66 17.27 53.56 81.25 42.74 14.58 12.60 0.00 14.42 18.67 19.14 21.88 25.62 48.57 32.15 10.93 11.45 8.54 17 ER2a ExonRegion 0 10.94 13.15 40.72 15.65 31.84 27.36 24.53 25.69 61.51 31.31 66.78 22.65 70.21 42.03 33.53 59.70 43.99 78.19 70.77 55.20 60.22 31.12 38.02 18 E2_Da NovelBoundary 0 7.56 3.35 9.99 27.10 14.01 0.00 10.38 32.61 74.07 22.38 4.74 0.00 0.00 0.00 0.00 0.00 8.42 8.95 0.00 0.00 2.72 0.00 3.59 19 E2a_E3a KnownJunction 0 16.67 5.99 52.48 24.57 0.00 24.19 37.41 27.89 50.29 33.36 58.65 25.66 64.77 72.22 34.12 64.68 52.45 59.24 73.23 112.49 63.45 60.44 35.77 20 I2 Intron 0 2.29 2.20 9.03 11.61 18.61 1.13 3.27 16.32 40.39 9.51 0.90 0.55 1.45 0.83 1.00 3.22 0.51 7.24 1.48 2.63 1.70 0.97 4.08 21 I2_SR1 SilentIntronRegion 0 2.92 1.48 6.13 6.10 12.15 0.00 0.52 5.21 36.87 7.86 0.73 2.46 0.00 0.53 3.06 6.15 0.00 7.17 2.20 2.90 0.00 0.34 2.82 22 I2_AR1 ActiveIntronRegion 0 0.00 4.41 13.48 16.13 35.68 0.00 4.63 12.96 61.96 14.53 1.93 0.00 3.91 1.62 0.00 0.00 0.00 9.24 0.00 4.26 0.00 2.08 5.87 23 I2_SR2 SilentIntronRegion 0 2.23 2.44 10.11 13.57 20.71 1.55 4.19 20.31 42.20 10.20 0.95 0.00 1.88 0.93 0.43 2.51 0.70 7.45 1.34 2.58 2.31 1.15 4.56 24 E3_Aa NovelBoundary 0 17.93 6.31 25.25 20.98 57.13 2.90 28.40 49.74 97.86 28.23 0.00 6.15 13.96 0.00 6.18 0.00 0.00 7.38 4.80 0.00 3.15 3.12 12.04 25 ER3a ExonRegion 0 8.38 13.98 54.49 18.98 17.62 17.92 16.87 25.21 48.05 33.42 74.89 31.09 44.88 44.44 30.28 53.50 51.67 62.02 71.32 51.52 76.88 39.04 38.99 26 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 Ix Intron 0 4.84 3.26 7.35 6.22 11.50 3.86 5.81 4.83 15.32 6.17 7.25 6.57 10.81 5.40 5.92 7.61 6.34 4.08 8.88 4.87 2.42 9.82 6.99 28 Ix_SR2 SilentIntronRegion 0 2.59 3.74 6.12 5.73 7.86 3.07 6.09 6.68 14.36 5.49 8.07 4.39 9.47 5.80 5.89 8.09 7.01 3.33 9.51 5.53 1.81 7.73 6.47 29 Ix_AR3 ActiveIntronRegion 0 5.68 2.35 5.92 6.93 15.89 4.26 6.32 4.77 18.15 5.56 5.01 10.96 15.71 3.49 4.57 7.98 4.15 3.22 2.28 3.33 0.75 13.48 3.85 30 Ix_AR1 ActiveIntronRegion 0 6.66 3.66 10.41 6.09 11.24 4.40 4.96 2.70 13.53 7.69 8.70 4.51 7.20 6.99 7.42 6.69 7.92 5.92 15.27 5.74 4.95 8.44 11.02 31 ER4a ExonRegion 1 5.55 16.99 44.53 10.50 14.68 29.16 26.61 20.21 34.07 24.81 49.19 17.85 72.41 48.58 35.81 76.80 43.39 61.49 81.23 48.42 70.81 44.39 41.90 32 E4a_E5a KnownJunction 0 3.70 17.56 50.68 7.99 22.58 56.90 27.12 19.59 29.02 24.77 63.91 24.31 20.62 34.38 37.33 87.75 34.13 61.39 57.98 33.49 78.15 71.03 65.47 33 Ix Intron 0 5.91 12.49 13.34 6.53 16.81 3.75 9.13 7.19 20.74 9.86 6.21 4.75 6.47 6.41 4.47 8.57 5.38 8.48 8.89 12.08 4.00 7.76 9.29 34 Ix_AR2 ActiveIntronRegion 0 4.66 0.96 10.00 4.74 14.27 2.58 7.40 6.15 16.79 5.84 6.17 6.25 10.25 7.17 2.07 16.51 5.90 18.17 13.98 9.24 9.14 7.76 8.32 35 Ix_SR1 SilentIntronRegion 0 7.90 9.90 11.27 8.27 11.78 2.53 7.59 9.26 23.80 9.89 8.46 4.03 3.70 8.94 5.80 10.38 6.93 10.65 9.93 16.70 4.79 7.17 14.37 36 Ix_AR1 ActiveIntronRegion 0 4.52 17.01 15.78 5.46 21.57 5.03 10.78 5.70 19.06 10.68 4.36 5.07 8.05 4.18 3.86 5.51 4.01 4.76 7.04 8.84 2.32 8.28 5.29 37 E5_Aa NovelBoundary 0 3.48 3.22 13.72 8.89 25.04 31.12 12.32 14.54 10.01 9.97 10.06 0.00 0.00 14.13 6.30 18.97 14.12 9.16 38.12 12.21 3.15 6.25 3.33 38 ER5a ExonRegion 0 6.75 21.24 44.93 12.96 17.37 25.52 26.47 8.95 28.86 34.99 57.59 15.11 43.89 45.89 32.11 55.74 35.22 43.72 68.67 39.72 77.94 38.55 52.33 39 E5_Da NovelBoundary 0 17.71 0.00 11.95 4.69 36.59 2.90 8.74 4.35 24.54 8.81 11.90 18.91 15.26 0.00 0.00 7.35 0.00 1.58 0.00 11.38 0.00 5.63 10.93 40 E5a_E6a KnownJunction 0 13.11 25.59 44.23 5.39 15.37 21.18 21.20 15.24 24.36 27.18 44.38 6.30 41.07 48.68 18.79 48.88 31.88 40.42 107.96 41.61 52.82 32.27 37.99 41 Ix Intron 0 2.38 8.56 17.43 8.31 19.52 4.35 10.29 7.64 24.67 11.35 6.65 4.11 6.51 2.91 3.38 8.46 5.09 6.76 6.23 13.37 1.57 5.19 4.01 42 Ix_SR2 SilentIntronRegion 0 3.47 6.40 13.30 4.42 21.53 2.86 9.93 5.93 25.87 12.21 3.25 3.99 7.31 1.67 4.83 7.75 4.40 5.93 3.51 6.70 0.90 4.36 2.83 43 Ix_AR1 ActiveIntronRegion 0 0.00 16.66 27.72 9.86 29.18 5.76 9.71 6.42 29.35 6.23 3.96 2.06 5.81 1.62 0.00 11.75 3.46 4.22 7.43 10.33 0.94 5.36 4.34 44 Ix_SR1 SilentIntronRegion 0 1.64 10.06 20.55 11.50 17.70 5.55 10.74 9.18 23.80 11.04 9.61 4.35 5.98 4.01 2.40 9.00 5.79 7.63 8.47 19.10 2.16 5.92 5.01 45 E6_Aa NovelBoundary 0 3.63 27.82 24.22 4.49 27.33 0.00 8.57 8.34 30.87 11.47 12.00 0.00 6.33 16.30 6.30 19.05 8.70 5.26 4.80 22.05 2.66 8.82 15.71 46 ER6a ExonRegion 0 18.79 37.44 85.85 24.78 32.07 31.78 32.98 22.68 43.65 30.09 54.04 21.20 30.12 29.61 35.22 52.40 28.01 46.80 68.98 41.61 48.13 40.28 45.73