Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SNAI3 Gene 0 7.18 1.09 2.28 2.72 4.22 1.04 1.26 4.60 3.67 1.93 11.51 3.43 9.37 11.38 31.61 10.35 6.68 9.36 3.70 5.13 9.05 0.68 3.93 2 332281 Transcript 0 3.76 0.49 0.94 1.16 4.59 0.44 0.53 2.44 1.54 0.91 10.01 1.53 6.74 7.66 17.95 7.58 2.89 3.70 1.46 2.26 3.79 0.28 2.29 3 ER1a ExonRegion 0 1.50 0.00 0.00 0.00 0.95 0.00 0.00 0.08 0.00 0.00 0.54 0.00 0.00 1.80 2.48 0.12 0.00 0.00 0.00 0.00 0.00 0.00 0.08 4 E1_Da NovelBoundary 0 0.00 0.00 0.00 1.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.45 4.19 0.00 0.00 0.00 0.00 8.53 0.00 3.76 5 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.56 0.00 0.00 4.90 0.00 0.00 2.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 I1 Intron 0 3.84 1.76 3.37 2.78 2.95 1.31 2.01 5.06 2.47 1.88 3.17 1.90 5.62 3.85 14.60 7.52 4.23 7.52 3.32 3.23 10.30 1.74 3.93 7 I1_SR1 SilentIntronRegion 0 1.87 0.50 1.78 1.13 2.73 0.93 1.25 2.34 0.70 2.36 1.61 0.90 3.92 1.76 10.75 4.09 3.76 1.56 1.86 2.04 7.40 2.27 1.11 8 I1_AR1 ActiveIntronRegion 0 4.94 1.59 5.29 2.27 4.15 0.71 2.32 5.29 3.59 1.57 1.11 4.16 3.00 2.81 12.56 6.22 4.28 4.24 4.71 3.15 9.28 1.18 1.91 9 I1_SR2 SilentIntronRegion 0 4.25 2.38 3.26 3.74 2.54 1.74 2.21 6.17 2.77 1.81 4.74 1.38 7.50 5.22 17.20 9.61 4.42 11.57 3.37 3.79 12.03 1.74 6.06 10 E2_Aa NovelBoundary 0 3.78 0.00 1.63 4.49 0.00 0.00 0.00 10.19 7.84 10.10 11.53 0.00 0.00 0.00 13.35 7.35 0.00 8.91 3.95 6.52 2.84 2.88 4.10 11 ER2a ExonRegion 0 5.01 1.34 1.65 2.50 3.47 0.90 1.09 6.54 3.02 3.08 14.90 4.22 9.11 11.95 30.78 12.06 6.81 4.55 1.84 5.94 7.59 0.51 2.91 12 E2_Da NovelBoundary 0 3.78 0.00 1.27 1.37 0.00 0.00 0.00 4.89 2.89 4.35 4.90 0.00 12.99 4.89 5.07 3.50 0.00 4.81 0.00 5.94 11.68 0.00 4.18 13 E2a_E3a KnownJunction 0 2.82 0.00 0.00 0.00 13.33 0.00 0.00 0.00 0.00 0.00 18.74 0.00 13.64 9.77 19.90 14.95 0.00 0.00 0.00 0.00 0.00 0.00 3.24 14 I2 Intron 0 4.73 1.20 3.47 3.51 2.26 1.63 0.89 3.04 3.03 1.51 3.18 0.30 4.45 4.11 16.69 7.65 5.01 9.14 5.64 3.77 8.83 1.32 4.83 15 I2_SR1 SilentIntronRegion 0 4.74 1.20 3.47 3.52 2.26 1.63 0.89 3.05 3.03 1.52 3.19 0.30 4.45 4.11 16.72 7.66 5.02 9.16 5.65 3.78 8.84 1.32 4.84 16 E3_Aa NovelBoundary 0 2.82 0.00 3.99 3.83 0.00 4.43 1.81 12.98 2.40 2.42 0.00 0.00 0.00 4.77 19.66 11.28 8.32 19.61 4.80 5.94 11.49 0.00 3.24 17 ER3a ExonRegion 0 9.46 1.09 3.04 3.28 5.21 1.28 1.57 4.02 4.65 1.48 10.96 3.44 10.97 12.46 36.59 10.79 7.62 13.93 5.48 5.38 11.38 0.90 5.19 18 IG24 Intergenic 0 8.33 3.00 4.71 3.00 3.82 2.25 2.26 3.19 3.76 2.19 6.14 3.51 8.62 10.05 24.97 10.33 7.17 12.25 6.54 7.75 12.65 3.06 5.62 19 IG24_AR17 ActiveIntergenicRegion 0 4.18 0.62 6.45 1.71 0.49 1.11 1.40 5.51 3.66 2.33 4.07 1.08 8.93 8.64 25.71 12.50 6.93 17.15 12.10 5.59 19.02 2.11 8.67 20 IG24_SR9 SilentIntergenicRegion 0 2.64 0.62 4.74 4.23 2.56 2.81 0.92 4.79 5.58 2.33 5.18 0.79 3.32 6.88 23.83 10.24 5.51 16.30 4.37 8.50 19.79 3.50 5.81 21 IG24_AR16 ActiveIntergenicRegion 0 1.81 2.03 1.23 3.50 0.00 1.83 0.57 0.00 3.71 4.59 9.66 0.00 0.00 3.25 17.41 2.97 4.72 11.35 5.01 4.26 10.39 1.49 2.94 22 IG24_AR15 ActiveIntergenicRegion 0 2.12 2.03 1.23 2.11 0.00 1.83 1.32 0.00 4.04 5.53 7.38 0.00 0.00 4.87 17.67 5.40 8.40 14.45 6.37 4.45 11.02 0.00 2.94 23 IG24_AR14 ActiveIntergenicRegion 0 2.12 1.36 0.00 1.36 0.00 1.83 1.32 2.02 4.94 4.78 5.80 0.00 0.00 8.12 12.57 13.87 9.90 12.93 6.37 8.87 15.43 0.00 3.92 24 IG24_AR13 ActiveIntergenicRegion 0 2.12 0.00 0.00 1.36 0.00 1.83 3.97 4.32 4.94 2.68 3.87 0.00 0.00 5.41 8.70 14.37 10.45 12.01 6.37 10.99 16.90 0.00 5.87 25 IG24_AR12 ActiveIntergenicRegion 0 0.18 0.00 0.31 1.70 0.00 0.31 3.09 5.19 5.76 2.29 5.48 0.00 0.00 2.84 11.61 14.86 15.95 11.39 6.11 14.01 20.38 0.00 15.91 26 IG24_AR11 ActiveIntergenicRegion 0 4.23 0.00 1.23 2.73 1.07 1.83 2.65 6.74 6.18 2.29 4.45 0.00 0.94 0.97 14.80 10.11 9.90 10.90 6.37 11.91 24.02 0.00 20.85 27 IG24_AR10 ActiveIntergenicRegion 0 5.63 1.46 1.26 1.46 3.43 2.83 1.60 4.12 4.01 2.49 5.57 1.03 11.57 8.60 20.72 12.11 8.25 13.61 9.34 8.38 18.52 1.20 8.55 28 IG24_AR8 ActiveIntergenicRegion 0 9.83 2.34 6.50 4.39 4.54 2.76 2.67 2.96 5.59 3.75 11.12 5.11 15.61 17.18 43.40 16.64 11.57 21.67 10.56 11.23 21.52 5.47 8.01 29 IG24_AR7 ActiveIntergenicRegion 0 5.87 1.47 3.96 1.96 2.26 2.87 1.12 2.48 4.22 0.82 4.66 0.00 3.28 11.07 21.23 1.08 1.59 2.10 3.06 5.90 7.15 3.26 3.54 30 IG24_SR6 SilentIntergenicRegion 0 3.22 3.19 1.51 0.00 0.00 3.95 0.00 3.27 0.72 0.86 3.45 0.00 0.00 9.99 13.70 0.00 2.39 2.16 0.10 4.42 2.47 0.77 4.52 31 IG24_AR6 ActiveIntergenicRegion 0 3.36 1.45 3.84 1.48 0.00 2.20 0.48 4.36 1.68 1.64 4.84 0.00 0.94 11.09 20.71 0.00 1.66 2.49 3.47 4.54 9.38 1.65 4.29 32 IG24_AR5 ActiveIntergenicRegion 0 5.31 5.95 0.00 1.70 3.36 6.15 1.11 1.08 2.31 0.00 4.04 10.75 6.46 17.09 28.25 21.12 12.42 16.90 5.33 10.67 16.58 2.61 9.82 33 IG24_SR3 SilentIntergenicRegion 0 12.39 5.51 4.91 3.01 5.71 1.68 3.39 2.90 2.77 1.64 4.34 5.28 8.51 6.69 16.91 9.43 6.79 8.21 5.29 6.75 5.34 2.27 4.01 34 IG24_AR1 ActiveIntergenicRegion 0 4.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.29 0.00 0.00 8.29 17.03 0.00 0.00 0.00 3.19 2.13 0.00 0.00 0.00