Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 KIAA0174 Gene 0 424.55 345.53 328.22 242.66 359.17 240.90 284.13 269.39 287.33 353.57 567.84 306.94 242.97 512.75 446.79 494.39 450.15 324.38 284.15 265.20 309.83 320.05 294.50 2 378799 Transcript 0 0.79 1.15 0.25 0.08 0.28 0.32 0.18 3.26 2.78 0.93 1.41 0.00 0.24 2.67 1.21 1.34 1.95 0.93 0.03 3.55 2.91 0.85 1.69 3 424485 Transcript 0 30.04 52.90 27.28 15.36 18.11 11.50 42.54 18.11 29.37 36.63 75.30 16.24 13.23 40.71 27.93 52.54 68.32 22.03 33.01 35.29 44.11 55.26 19.16 4 378798 Transcript 1 20.60 45.91 51.62 14.75 7.64 12.61 31.40 18.24 1.36 22.67 54.86 0.00 6.66 31.55 33.38 32.13 37.59 65.50 46.40 39.69 5.31 28.35 30.05 5 439924 Transcript 0 1.59 0.00 1.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.34 0.00 0.00 0.00 0.00 0.00 0.00 0.97 0.00 1.28 0.00 0.00 1.66 6 329908 Transcript 0 14.15 3.35 1.18 4.99 7.47 7.50 8.44 9.32 0.00 7.01 22.85 11.70 21.75 13.95 0.00 4.36 12.90 6.47 0.00 3.26 10.56 5.57 11.95 7 456820 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 IG30_AR9 ActiveIntergenicRegion 0 2.73 3.32 15.37 2.96 3.45 1.73 2.96 6.41 4.11 3.52 2.49 2.36 3.55 3.21 4.19 4.08 3.68 3.70 8.75 6.58 1.32 0.72 2.52 9 ER1a ExonRegion 0 0.79 1.15 0.25 0.08 0.28 0.32 0.18 3.26 2.78 0.93 1.41 0.00 0.24 2.67 1.21 1.34 1.95 0.93 0.03 3.55 2.91 0.85 1.69 10 E1_Ab KnownBoundary 0 3.26 8.75 0.00 0.00 0.00 2.50 0.00 2.51 3.39 0.00 5.37 0.00 0.00 7.59 0.00 0.00 0.00 2.45 0.00 3.26 7.78 2.51 3.50 11 E1_Ac KnownBoundary 1 457.34 243.31 55.23 48.68 263.92 268.60 330.65 62.10 60.50 89.34 355.25 18.61 51.94 393.14 245.01 438.52 369.05 144.84 105.70 228.06 244.95 283.76 271.71 12 ER1b ExonRegion 1 191.32 119.98 27.18 19.91 122.61 124.57 156.42 33.52 37.10 46.16 177.14 12.22 23.79 207.25 131.28 223.44 205.36 22.04 52.79 121.12 130.65 140.64 147.78 13 ER1c ExonRegion 1 647.65 491.99 119.53 117.12 410.96 472.80 607.18 154.47 170.71 224.05 499.82 18.16 25.08 686.08 387.76 622.85 773.99 134.48 255.59 350.28 472.22 361.45 473.18 14 E1a_E3a KnownJunction 1 473.71 357.96 175.75 193.98 306.71 347.36 393.40 242.99 263.89 338.14 271.23 0.00 63.15 200.13 231.91 380.41 421.79 236.86 339.77 224.80 236.67 266.18 198.04 15 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER3a ExonRegion 1 140.43 103.34 98.73 84.54 104.15 85.37 122.91 116.65 170.05 199.41 302.30 99.83 76.68 136.03 109.23 165.98 359.00 130.06 137.62 155.01 196.39 104.46 109.28 17 E3a_E4a KnownJunction 1 59.05 43.48 127.29 92.90 74.02 73.31 55.56 181.10 214.41 286.81 653.64 193.86 99.34 352.94 139.32 140.48 937.07 81.83 88.47 315.30 462.77 209.23 135.64 18 ER4a ExonRegion 0 50.05 87.36 181.93 175.99 176.51 138.70 101.86 212.26 272.76 326.17 552.49 219.42 247.04 619.28 371.40 637.77 520.46 527.94 289.30 395.87 320.53 365.34 435.34 19 E4_Da KnownBoundary 0 76.01 131.69 180.80 137.98 636.84 421.01 370.88 214.53 275.23 320.46 565.77 504.76 590.06 371.24 290.62 347.52 458.91 363.17 141.84 256.05 376.59 211.87 191.38 20 E4a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER4b ExonRegion 0 56.03 137.15 170.76 137.41 542.70 460.71 475.26 195.06 250.11 319.41 481.23 384.18 347.61 444.87 332.96 323.09 464.07 231.68 164.14 254.32 337.30 262.95 187.95 22 E4b_E5a KnownJunction 0 69.20 228.91 196.12 159.55 547.37 520.78 691.46 210.67 257.38 341.90 473.01 333.71 276.77 607.81 437.85 360.50 506.31 217.09 224.57 292.29 316.61 353.81 210.42 23 ER5a ExonRegion 0 175.92 388.41 213.43 171.88 276.77 327.82 429.10 216.26 298.81 396.61 719.07 330.17 201.88 621.26 383.55 431.60 600.38 310.42 237.15 312.27 374.60 359.75 263.57 24 E5_Da NovelBoundary 0 276.72 349.54 211.97 152.03 114.52 131.80 209.64 171.89 241.52 329.01 527.87 200.77 142.36 478.43 242.54 325.64 505.38 252.45 170.17 235.53 290.35 238.44 154.85 25 E5a_E6a KnownJunction 0 60.08 101.23 54.55 30.03 34.21 23.00 84.09 35.36 58.13 72.69 143.35 30.31 26.46 78.58 55.13 104.33 129.22 44.06 65.23 70.05 88.22 107.40 38.33 26 E5b_E7a KnownJunction 0 553.73 384.14 271.43 204.64 203.65 162.35 244.22 232.93 315.88 456.79 913.55 274.29 258.75 724.59 428.33 533.28 567.09 359.61 355.59 385.10 461.04 417.73 345.98 27 ER5b ExonRegion 0 304.78 404.68 257.33 178.54 181.95 165.04 207.86 226.43 318.66 451.88 823.41 307.39 211.05 661.02 333.64 478.51 594.16 360.31 258.01 312.76 396.67 320.86 249.61 28 ER5c ExonRegion 0 367.22 352.26 253.04 188.38 177.19 142.22 212.20 216.06 306.65 447.42 847.25 283.82 213.66 683.57 372.01 496.68 580.22 363.49 297.48 317.61 414.17 373.07 284.04 29 ER6a ExonRegion 0 0.00 4.58 0.00 0.68 2.01 0.00 0.99 0.86 0.62 0.57 7.25 2.16 0.00 2.84 0.73 0.74 7.43 0.00 0.80 0.53 0.00 3.13 0.00 30 ER7a ExonRegion 0 536.31 320.60 235.96 197.31 243.30 227.33 218.89 243.71 333.91 467.73 831.84 347.90 444.99 689.84 430.32 598.81 660.06 462.40 294.61 332.57 467.21 436.30 328.94 31 E7a_E8a KnownJunction 0 939.80 463.08 252.71 219.22 324.87 303.18 273.76 236.92 393.57 484.27 798.68 523.67 751.57 749.37 474.81 691.44 714.63 518.21 253.00 323.55 481.37 414.86 420.33 32 E8_Ab NovelBoundary 1 239.67 208.06 123.71 96.96 130.48 153.21 162.65 115.01 198.52 209.85 315.55 179.61 171.09 264.82 118.67 232.67 280.97 221.44 146.73 143.17 166.49 168.27 136.07 33 ER8a ExonRegion 0 591.97 375.59 244.60 204.22 264.28 305.54 246.36 243.84 370.06 447.47 775.54 456.26 653.00 707.62 447.24 612.26 657.89 528.31 275.17 290.67 432.44 395.23 353.98 34 ER8b ExonRegion 0 392.68 288.52 291.31 215.53 329.12 366.39 314.67 252.35 383.64 447.78 746.97 398.40 405.35 747.82 431.16 633.31 608.64 470.42 302.80 288.28 363.34 390.30 336.70 35 E8_Da KnownBoundary 0 412.67 275.41 325.51 247.05 591.09 509.59 460.48 280.95 399.97 457.11 728.24 408.88 414.91 899.47 539.84 670.85 671.43 395.42 374.69 367.97 385.92 453.43 384.39 36 ER8c ExonRegion 0 252.30 240.67 333.15 224.43 509.81 361.30 359.90 252.81 412.86 456.49 835.68 510.17 337.01 764.79 439.75 609.29 677.49 426.94 382.37 335.73 442.72 453.57 421.20 37 E8b_E9a KnownJunction 0 265.60 235.68 365.98 235.57 460.44 300.79 347.47 255.60 444.93 461.97 901.97 472.35 381.63 739.54 488.66 587.79 640.49 504.74 288.10 355.89 484.27 494.95 430.14 38 ER9a ExonRegion 0 185.20 236.19 297.58 221.66 298.58 240.75 266.11 287.26 389.20 450.26 728.34 460.16 387.30 680.44 469.43 765.21 664.56 429.70 412.79 352.48 432.64 456.62 434.67 39 E9a_E10a KnownJunction 0 259.08 190.03 263.09 236.53 450.76 279.55 341.73 215.19 321.15 373.97 590.36 502.81 376.92 480.90 414.37 456.38 486.58 202.25 241.70 240.71 361.64 246.53 235.09 40 E9a_E11a KnownJunction 0 20.60 45.91 51.62 14.75 7.64 12.61 31.40 18.24 1.36 22.67 54.86 0.00 6.66 31.55 33.38 32.13 37.59 65.50 46.40 39.69 5.31 28.35 30.05 41 E9a_E11b KnownJunction 0 3.19 0.00 3.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 1.95 0.00 2.56 0.00 0.00 3.33 42 I9 Intron 0 38.77 83.89 54.29 49.14 53.95 20.65 62.52 54.75 52.57 52.84 54.40 79.53 78.13 32.09 21.01 37.22 39.11 28.20 33.45 48.80 20.92 69.49 23.19 43 I9_AR2 ActiveIntronRegion 0 39.48 85.43 55.29 49.94 54.87 21.02 63.59 55.76 53.53 53.82 55.38 80.99 79.46 32.63 21.36 37.82 39.74 28.71 33.99 49.66 21.28 70.72 23.62 44 E10_Aa NovelBoundary 1 41.27 75.78 83.59 54.34 42.87 18.40 45.80 52.78 39.32 40.05 46.54 104.13 124.02 48.21 8.90 42.81 13.56 41.83 29.74 43.46 18.04 27.98 27.40 45 ER10a ExonRegion 0 526.53 400.35 269.42 243.62 581.15 429.03 437.08 318.95 365.69 476.04 911.73 653.61 666.69 717.62 543.72 998.03 694.57 370.62 633.17 307.25 467.35 542.59 561.88 46 E10_Da NovelBoundary 0 106.09 100.31 122.56 135.85 137.35 79.05 110.76 89.50 137.38 91.14 98.18 129.94 110.22 140.44 41.91 90.66 71.44 100.52 38.02 88.08 73.14 110.96 71.11 47 E10a_E11a KnownJunction 0 327.39 221.34 160.14 129.45 338.96 203.97 223.90 164.75 167.48 245.73 561.93 477.31 361.83 508.33 346.62 457.74 451.24 207.68 288.20 187.92 257.49 181.01 215.46 48 E10a_E11b KnownJunction 0 14.15 3.35 1.18 4.99 7.47 7.50 8.44 9.32 0.00 7.01 22.85 11.70 21.75 13.95 0.00 4.36 12.90 6.47 0.00 3.26 10.56 5.57 11.95 49 I10 Intron 0 114.72 113.57 88.70 106.83 116.88 61.83 84.72 87.54 102.54 73.64 82.05 107.91 72.82 84.81 50.26 91.22 62.51 58.27 56.82 67.05 45.15 90.54 58.43 50 I10_AR1 ActiveIntronRegion 0 114.92 113.78 88.86 107.02 117.09 61.94 84.87 87.69 102.73 73.77 82.19 108.10 72.95 84.96 50.34 91.38 62.62 58.37 56.92 67.17 45.23 90.70 58.53 51 E11_Aa NovelBoundary 0 197.89 91.43 80.28 93.69 70.54 42.87 37.71 28.92 67.56 33.26 63.23 43.06 19.97 24.19 30.53 30.76 76.58 40.62 34.54 34.26 44.23 27.07 41.23 52 E11_Ab NovelBoundary 0 245.38 67.95 36.99 28.73 69.95 43.16 60.81 38.98 31.13 20.82 54.49 19.36 28.41 28.49 22.87 35.03 17.48 22.09 13.18 42.89 24.90 65.21 36.45 53 ER11a ExonRegion 0 337.80 280.63 242.13 167.63 278.81 208.32 247.85 200.85 194.41 309.89 633.99 427.75 374.26 517.44 364.98 461.87 497.78 342.57 310.89 238.30 255.19 226.69 234.34 54 ER11b ExonRegion 0 401.56 369.42 258.00 186.90 269.22 239.56 313.78 228.39 203.20 307.42 666.06 395.46 377.12 575.31 345.58 490.67 531.52 312.27 248.17 235.35 298.45 255.70 263.96 55 E11a_E12a KnownJunction 0 529.72 519.05 321.81 286.71 330.22 302.84 416.41 277.13 275.66 362.02 629.48 423.29 313.29 675.09 435.13 526.44 511.73 286.36 239.72 269.67 371.03 296.74 335.22 56 I11_AR1 ActiveIntronRegion 0 100.21 42.33 72.59 43.75 50.96 20.42 33.89 42.08 38.50 34.34 30.78 38.86 49.48 22.25 22.17 26.60 20.96 20.28 29.82 18.37 17.64 40.98 19.26 57 ER12a ExonRegion 0 578.15 448.73 437.44 312.33 441.36 254.11 318.53 327.22 307.85 377.39 566.07 313.23 212.38 507.38 537.60 474.08 402.23 328.80 289.09 262.21 297.06 318.18 279.52 58 ER12b ExonRegion 0 25.40 8.13 2.63 5.45 12.61 6.29 6.62 4.44 2.12 0.98 2.21 2.47 2.68 3.48 7.05 0.00 7.07 1.32 0.91 3.95 0.00 7.14 0.84 59 IG31 Intergenic 0 16.39 22.24 11.66 18.48 24.60 11.71 25.37 9.97 13.00 15.55 2.43 13.97 9.42 5.20 4.31 4.89 8.94 12.28 10.17 16.06 7.68 8.47 9.38 60 IG31_AR1 ActiveIntergenicRegion 0 16.44 22.32 11.71 18.55 24.69 11.76 25.46 10.01 13.05 15.60 2.44 14.03 9.46 5.22 4.33 4.91 8.98 12.32 10.21 16.12 7.70 8.50 9.41