Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CHTF8 Gene 0 142.50 176.10 199.76 100.80 138.30 133.63 130.65 110.51 109.08 146.22 309.70 144.94 126.31 457.07 363.12 327.17 310.71 210.40 160.76 153.15 273.62 200.97 155.20 2 448552 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 398233 Transcript 0 0.00 0.00 0.00 1.83 0.00 0.00 0.00 2.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 306585 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 421300 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 398235 Transcript 1 39.27 18.69 9.78 2.83 19.08 16.18 21.97 30.87 30.58 24.97 61.82 5.05 3.02 42.75 19.47 68.74 27.02 33.04 85.32 18.39 92.73 36.53 61.59 7 ER1a ExonRegion 0 80.02 58.41 16.19 4.07 65.45 145.86 73.20 7.80 10.56 22.70 37.28 6.89 12.30 119.26 124.72 122.25 149.21 15.69 44.17 55.80 43.40 87.06 43.45 8 E1a_E3a KnownJunction 1 15.85 5.46 34.12 5.69 0.00 13.86 1.72 23.58 15.36 43.38 17.79 32.26 45.94 31.61 4.33 42.38 6.92 27.23 17.41 10.29 7.85 13.59 3.50 9 E1a_E4a KnownJunction 0 0.00 0.00 0.00 1.83 0.00 0.00 0.00 2.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER2a ExonRegion 1 36.24 15.28 6.26 2.40 17.88 24.01 14.26 18.86 19.87 15.31 64.31 2.76 6.04 41.76 29.67 56.65 22.91 25.59 85.09 15.12 82.84 30.50 37.82 11 E2a_E3a KnownJunction 1 42.30 22.10 13.31 3.26 20.29 8.35 29.68 42.88 41.29 34.63 59.33 7.35 0.00 43.73 9.27 80.83 31.14 40.50 85.56 21.67 102.61 42.56 85.36 12 I2_AR1 ActiveIntronRegion 0 22.67 7.50 8.88 18.63 20.61 4.57 7.45 13.18 8.70 7.04 8.81 7.34 2.27 6.30 7.67 13.45 13.37 6.98 32.99 28.31 10.53 5.44 13.61 13 I2_SR2 SilentIntronRegion 0 2.18 2.93 10.16 19.68 19.12 3.88 9.81 15.05 18.31 9.58 9.15 22.28 8.00 9.08 12.29 19.93 11.36 10.76 28.11 35.23 11.80 9.80 16.58 14 I2_AR2 ActiveIntronRegion 1 32.59 18.96 19.19 17.20 33.67 9.14 29.72 18.91 13.71 11.43 7.61 39.64 8.25 8.55 6.69 9.04 13.51 5.33 17.09 28.20 3.97 12.04 9.93 15 I2_AR3 ActiveIntronRegion 1 50.58 17.29 13.94 17.85 20.20 9.08 21.61 17.41 15.44 8.60 10.44 59.64 12.78 5.77 11.24 4.31 18.49 1.85 2.71 26.22 0.00 10.37 3.30 16 I2_SR3 SilentIntronRegion 1 15.50 16.92 16.86 12.54 25.27 11.32 25.25 12.39 12.78 9.21 5.68 43.74 16.57 5.09 9.99 6.62 10.23 2.30 4.69 19.37 1.34 10.65 8.84 17 I2_AR8 ActiveIntronRegion 0 22.29 11.06 22.17 11.48 31.93 7.10 17.06 15.56 13.06 10.51 3.88 15.85 11.45 7.24 9.12 7.54 6.26 8.70 14.07 11.55 5.57 6.41 17.87 18 I2_AR9 ActiveIntronRegion 0 33.49 10.53 22.99 12.83 63.12 25.89 17.52 8.64 10.24 8.03 5.80 9.68 11.31 4.39 13.48 4.90 1.55 9.24 11.99 17.40 0.00 4.17 17.79 19 I2_SR6 SilentIntronRegion 0 17.24 12.56 16.14 20.59 23.70 16.09 19.28 12.76 15.13 13.13 7.20 28.00 19.21 7.33 11.61 12.79 11.60 10.21 9.66 18.85 2.97 9.75 11.05 20 I2_AR10 ActiveIntronRegion 0 15.84 28.94 26.21 26.43 30.89 8.72 23.00 15.77 18.03 16.31 7.20 36.41 15.03 9.25 10.88 15.25 15.60 14.96 19.29 30.57 5.30 14.48 20.80 21 E3_Aa NovelBoundary 0 23.26 16.44 30.60 37.32 37.61 5.11 13.16 17.95 8.94 12.92 10.42 5.25 0.00 14.19 10.38 12.30 3.74 10.78 17.60 9.14 2.97 7.35 20.40 22 ER3a ExonRegion 0 42.88 24.58 26.77 3.69 35.66 21.63 20.93 33.73 41.21 47.93 87.05 69.05 32.59 74.91 53.92 90.24 96.58 36.00 64.31 36.87 126.52 45.73 56.81 23 E3a_E4a KnownJunction 1 27.12 8.49 34.12 1.86 41.34 21.29 20.54 21.97 33.97 40.10 105.71 129.79 32.14 67.63 71.95 58.96 154.46 35.15 31.72 24.80 208.25 40.23 24.76 24 E3a_E5a NovelJunction 0 32.45 15.66 59.87 24.01 8.40 19.08 30.03 43.13 28.39 66.83 126.72 99.03 32.95 108.89 89.00 67.59 90.60 65.62 108.61 74.46 54.61 30.56 27.23 25 ER4a ExonRegion 0 22.13 20.34 74.19 33.31 28.78 14.89 14.49 67.09 71.03 77.44 237.17 169.95 142.69 362.19 260.25 397.28 260.83 144.99 167.77 100.27 211.39 208.76 157.06 26 E4a_E5a KnownJunction 0 7.41 21.18 91.27 33.40 41.00 36.74 16.30 66.79 90.33 108.79 303.76 150.05 148.53 482.31 264.66 414.68 318.75 181.44 213.46 85.65 196.58 238.57 213.24 27 ER5a ExonRegion 0 155.04 194.78 220.82 112.00 151.17 143.69 143.29 120.25 118.16 159.32 334.08 154.16 134.88 492.63 391.70 343.61 330.83 229.01 168.79 165.14 292.95 212.52 164.36