Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MVD Gene 0 35.35 28.05 91.44 25.63 24.03 43.09 27.70 77.76 76.16 59.91 491.61 17.75 62.80 173.95 413.77 328.52 271.96 421.85 84.31 134.22 265.42 69.54 64.98 2 378400 Transcript 1 26.67 23.71 84.46 27.22 14.05 27.20 15.96 85.95 63.01 51.41 299.13 3.68 3.98 19.72 82.14 223.92 165.87 447.55 49.93 122.27 198.65 39.53 32.82 3 301012 Transcript 0 29.40 19.43 92.45 27.98 13.97 39.73 17.24 73.32 72.13 51.48 441.99 22.61 107.25 186.16 379.87 310.62 225.49 485.47 78.86 134.80 243.73 51.16 57.56 4 IG24 Intergenic 0 8.33 3.00 4.71 3.00 3.82 2.25 2.26 3.19 3.76 2.19 6.14 3.51 8.62 10.05 24.97 10.33 7.17 12.25 6.54 7.75 12.65 3.06 5.62 5 IG24_AR17 ActiveIntergenicRegion 0 4.18 0.62 6.45 1.71 0.49 1.11 1.40 5.51 3.66 2.33 4.07 1.08 8.93 8.64 25.71 12.50 6.93 17.15 12.10 5.59 19.02 2.11 8.67 6 IG24_SR9 SilentIntergenicRegion 0 2.64 0.62 4.74 4.23 2.56 2.81 0.92 4.79 5.58 2.33 5.18 0.79 3.32 6.88 23.83 10.24 5.51 16.30 4.37 8.50 19.79 3.50 5.81 7 IG24_AR16 ActiveIntergenicRegion 0 1.81 2.03 1.23 3.50 0.00 1.83 0.57 0.00 3.71 4.59 9.66 0.00 0.00 3.25 17.41 2.97 4.72 11.35 5.01 4.26 10.39 1.49 2.94 8 IG24_AR15 ActiveIntergenicRegion 0 2.12 2.03 1.23 2.11 0.00 1.83 1.32 0.00 4.04 5.53 7.38 0.00 0.00 4.87 17.67 5.40 8.40 14.45 6.37 4.45 11.02 0.00 2.94 9 IG24_AR14 ActiveIntergenicRegion 0 2.12 1.36 0.00 1.36 0.00 1.83 1.32 2.02 4.94 4.78 5.80 0.00 0.00 8.12 12.57 13.87 9.90 12.93 6.37 8.87 15.43 0.00 3.92 10 IG24_AR13 ActiveIntergenicRegion 0 2.12 0.00 0.00 1.36 0.00 1.83 3.97 4.32 4.94 2.68 3.87 0.00 0.00 5.41 8.70 14.37 10.45 12.01 6.37 10.99 16.90 0.00 5.87 11 IG24_AR12 ActiveIntergenicRegion 0 0.18 0.00 0.31 1.70 0.00 0.31 3.09 5.19 5.76 2.29 5.48 0.00 0.00 2.84 11.61 14.86 15.95 11.39 6.11 14.01 20.38 0.00 15.91 12 IG24_AR11 ActiveIntergenicRegion 0 4.23 0.00 1.23 2.73 1.07 1.83 2.65 6.74 6.18 2.29 4.45 0.00 0.94 0.97 14.80 10.11 9.90 10.90 6.37 11.91 24.02 0.00 20.85 13 IG24_AR10 ActiveIntergenicRegion 0 5.63 1.46 1.26 1.46 3.43 2.83 1.60 4.12 4.01 2.49 5.57 1.03 11.57 8.60 20.72 12.11 8.25 13.61 9.34 8.38 18.52 1.20 8.55 14 IG24_AR8 ActiveIntergenicRegion 0 9.83 2.34 6.50 4.39 4.54 2.76 2.67 2.96 5.59 3.75 11.12 5.11 15.61 17.18 43.40 16.64 11.57 21.67 10.56 11.23 21.52 5.47 8.01 15 IG24_AR7 ActiveIntergenicRegion 0 5.87 1.47 3.96 1.96 2.26 2.87 1.12 2.48 4.22 0.82 4.66 0.00 3.28 11.07 21.23 1.08 1.59 2.10 3.06 5.90 7.15 3.26 3.54 16 IG24_SR6 SilentIntergenicRegion 0 3.22 3.19 1.51 0.00 0.00 3.95 0.00 3.27 0.72 0.86 3.45 0.00 0.00 9.99 13.70 0.00 2.39 2.16 0.10 4.42 2.47 0.77 4.52 17 IG24_AR6 ActiveIntergenicRegion 0 3.36 1.45 3.84 1.48 0.00 2.20 0.48 4.36 1.68 1.64 4.84 0.00 0.94 11.09 20.71 0.00 1.66 2.49 3.47 4.54 9.38 1.65 4.29 18 IG24_AR5 ActiveIntergenicRegion 0 5.31 5.95 0.00 1.70 3.36 6.15 1.11 1.08 2.31 0.00 4.04 10.75 6.46 17.09 28.25 21.12 12.42 16.90 5.33 10.67 16.58 2.61 9.82 19 IG24_SR3 SilentIntergenicRegion 0 12.39 5.51 4.91 3.01 5.71 1.68 3.39 2.90 2.77 1.64 4.34 5.28 8.51 6.69 16.91 9.43 6.79 8.21 5.29 6.75 5.34 2.27 4.01 20 IG24_AR1 ActiveIntergenicRegion 0 4.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.29 0.00 0.00 8.29 17.03 0.00 0.00 0.00 3.19 2.13 0.00 0.00 0.00 21 ER1a ExonRegion 1 29.00 40.08 54.06 10.07 26.62 70.27 55.12 46.46 30.99 31.68 563.79 4.63 13.93 91.99 267.79 272.13 445.62 137.32 76.48 97.85 342.17 58.11 60.47 22 E1a_E2a KnownJunction 0 22.37 15.98 52.10 10.52 4.33 30.04 22.61 25.96 27.00 19.31 175.57 5.40 34.09 36.14 70.83 79.04 55.82 169.59 48.10 68.01 108.23 17.57 12.89 23 I1_AR1 ActiveIntronRegion 0 1.18 4.39 8.09 1.89 8.07 17.34 10.55 6.96 9.49 7.45 39.40 0.00 2.35 30.32 55.21 28.28 22.35 54.19 8.55 24.62 34.94 8.33 6.71 24 ER2a ExonRegion 1 21.58 13.03 91.64 17.22 28.75 52.82 28.75 72.16 68.17 56.36 427.77 39.39 82.57 98.27 160.14 191.22 472.77 307.69 123.11 112.35 295.27 32.02 52.98 25 E2a_E3a KnownJunction 1 16.23 10.59 162.77 22.21 57.72 67.12 32.24 121.13 88.97 100.36 628.32 61.52 83.92 197.42 367.39 234.72 756.71 310.07 153.23 179.61 467.96 48.44 98.59 26 ER3a ExonRegion 0 16.97 10.27 119.00 23.73 17.33 39.45 15.17 80.97 82.37 55.45 383.59 10.88 40.29 146.11 389.02 353.99 236.72 312.75 96.34 140.94 250.44 79.25 77.83 27 E3_Da NovelBoundary 0 3.70 0.00 22.47 3.83 0.00 0.00 2.16 23.82 8.25 10.13 35.32 0.00 6.66 14.83 24.85 48.71 25.81 143.97 16.85 21.80 15.26 22.96 17.16 28 E3a_E4a KnownJunction 0 0.00 3.09 87.99 15.08 22.07 35.66 18.50 58.00 63.57 70.03 264.17 5.85 35.39 102.42 173.19 130.82 167.37 473.81 70.03 83.92 168.84 35.64 22.02 29 I3 Intron 0 8.45 5.00 14.59 3.74 7.81 2.82 7.32 13.06 9.33 6.04 53.46 0.55 3.09 27.34 44.91 54.79 32.96 93.81 11.74 21.90 38.90 13.76 10.83 30 I3_AR1 ActiveIntronRegion 0 8.50 5.03 14.68 3.77 7.86 2.83 7.37 13.14 9.39 6.08 53.78 0.55 3.11 27.50 45.17 55.12 33.16 94.38 11.81 22.03 39.14 13.84 10.89 31 E4_Aa NovelBoundary 0 23.19 9.67 15.52 5.63 7.47 12.89 10.33 9.57 12.18 12.84 65.28 0.00 6.82 7.42 90.49 48.88 39.55 148.44 8.19 21.09 38.18 19.53 7.34 32 ER4a ExonRegion 0 15.84 26.98 81.30 13.64 32.60 61.69 45.67 63.44 62.97 56.71 414.26 8.42 38.76 165.98 313.30 219.61 231.65 336.27 77.66 97.58 255.74 66.81 42.65 33 E4a_E5a KnownJunction 0 32.60 41.57 80.25 18.58 3.40 34.87 19.61 46.13 52.57 45.18 367.78 11.70 25.81 114.31 321.03 173.29 193.45 288.76 32.00 55.22 275.16 48.68 38.75 34 I4 Intron 0 7.79 3.45 7.68 2.85 5.16 5.57 5.41 11.74 12.15 6.79 37.15 1.26 6.16 20.59 38.49 45.83 26.61 61.67 9.30 16.41 22.78 12.54 13.38 35 I4_AR1 ActiveIntronRegion 0 7.81 3.45 7.70 2.85 5.17 5.58 5.43 11.76 12.18 6.80 37.24 1.27 6.17 20.64 38.57 45.94 26.67 61.81 9.33 16.44 22.83 12.57 13.41 36 E5_Aa NovelBoundary 0 12.45 19.01 12.57 5.59 4.33 7.67 3.89 13.10 28.24 12.52 81.92 0.00 6.66 12.13 45.24 90.23 47.78 131.28 17.04 17.71 35.83 5.57 0.00 37 ER5a ExonRegion 0 38.03 34.08 76.92 22.53 17.04 41.46 25.84 61.07 69.55 62.29 492.64 23.18 78.89 191.93 413.05 370.37 282.38 519.10 82.23 123.77 297.62 72.77 73.94 38 E5a_E6a KnownJunction 0 82.46 45.58 109.31 34.03 51.27 66.55 24.69 108.23 108.62 88.51 516.60 18.76 92.04 278.48 681.75 482.52 306.59 895.10 165.46 182.80 318.40 107.95 121.04 39 ER6a ExonRegion 0 38.49 24.19 132.03 40.92 27.33 57.97 21.34 99.35 99.29 82.07 691.28 15.76 101.24 230.65 504.20 498.37 389.11 717.74 133.15 191.57 344.34 106.34 117.90 40 E6a_E7a KnownJunction 1 51.42 22.89 135.33 36.89 15.96 59.11 15.81 90.03 82.20 68.87 597.20 6.30 121.10 204.43 388.03 366.31 325.48 587.52 87.06 188.88 299.62 84.01 110.89 41 E7a_E7b KnownJunction 1 24.82 25.46 68.09 30.13 7.98 5.45 0.00 57.42 43.46 42.20 289.76 0.00 7.95 19.72 70.96 197.81 125.29 308.83 27.58 123.23 175.20 41.27 37.13 42 E7_Ab NovelBoundary 1 43.93 37.30 108.33 45.55 11.80 29.76 21.42 80.14 78.30 64.01 589.04 19.06 167.85 244.28 485.45 412.54 230.86 492.18 67.20 197.63 325.88 63.99 82.55 43 ER7a ExonRegion 1 37.30 29.83 129.12 43.61 8.58 41.26 13.52 96.29 86.46 71.11 617.00 9.92 149.69 238.14 425.88 391.33 285.67 537.77 64.37 194.06 327.80 75.18 90.18 44 ER7b ExonRegion 1 38.10 31.18 118.86 42.25 10.70 38.51 16.33 86.42 83.58 66.52 563.76 12.99 145.39 240.37 448.73 401.24 275.07 505.05 71.14 180.14 304.85 59.73 83.20 45 ER7c ExonRegion 0 47.76 41.58 146.80 50.79 38.21 48.70 32.71 122.11 122.46 89.91 741.50 27.87 153.92 247.46 665.63 539.82 389.45 845.61 146.67 192.84 385.93 107.06 105.72 46 E7_Db KnownBoundary 1 30.82 22.04 51.59 13.05 16.55 18.23 18.86 55.74 39.09 28.96 233.11 24.46 27.76 47.32 88.63 211.40 124.73 301.28 67.01 77.02 120.71 55.91 25.52 47 E7b_E7c KnownJunction 1 28.52 21.97 100.82 24.31 20.12 48.95 31.93 114.47 82.55 60.63 308.50 7.35 0.00 19.72 93.33 250.02 206.45 586.28 72.28 121.31 222.09 37.78 28.51 48 E7_Ac KnownBoundary 0 20.97 9.21 77.58 24.04 16.72 51.50 9.94 74.26 64.41 32.88 258.75 0.00 13.15 66.22 105.07 181.15 160.54 399.11 23.81 91.47 163.22 21.62 41.91 49 ER7d ExonRegion 0 47.97 27.11 158.48 40.89 31.22 80.69 34.86 132.51 131.33 86.78 756.41 54.84 173.53 317.79 688.56 521.11 399.41 947.28 163.52 221.28 424.58 93.76 87.12 50 ER7e ExonRegion 0 57.71 34.60 160.88 44.46 33.46 75.35 42.12 129.09 108.46 69.06 729.83 34.85 130.61 282.84 515.95 493.03 339.95 725.37 105.16 199.16 382.94 83.76 103.79 51 E7c_E8a KnownJunction 1 48.38 32.63 180.98 62.76 40.75 65.70 29.68 129.79 108.56 98.50 625.26 30.91 162.81 257.46 469.38 476.88 317.81 699.03 139.77 141.51 322.42 68.03 70.68 52 ER8a ExonRegion 0 40.16 28.44 123.86 40.92 25.42 40.20 27.67 94.63 90.22 79.70 572.27 40.20 123.88 224.79 556.62 377.90 279.35 496.22 108.08 156.25 338.54 81.17 73.09 53 E8_Da NovelBoundary 0 21.19 2.50 9.37 9.49 0.00 0.00 2.25 5.09 13.48 9.67 58.17 0.00 19.80 24.66 27.07 55.20 23.09 178.91 17.60 33.68 29.84 32.27 25.18 54 E8a_E9a KnownJunction 1 47.64 25.85 108.57 28.73 43.38 50.43 31.89 94.51 80.70 66.51 515.55 18.16 122.39 302.37 504.11 330.51 211.69 364.13 81.13 177.95 228.14 46.60 86.81 55 I8 Intron 0 8.75 5.57 12.99 5.08 6.56 10.49 5.47 11.51 8.14 10.93 37.08 3.61 11.92 16.67 39.11 45.86 25.71 89.36 9.19 17.80 28.70 14.92 11.43 56 I8_SR1 SilentIntronRegion 0 9.29 5.81 13.80 5.39 6.69 11.05 5.68 12.23 8.65 11.60 38.88 3.65 12.46 17.50 40.47 48.40 27.14 94.80 9.59 18.68 30.03 15.85 11.99 57 E9_Aa NovelBoundary 0 18.08 12.23 7.81 5.86 27.50 4.71 15.41 9.78 6.48 3.06 41.75 0.00 11.85 9.59 31.15 68.87 44.60 67.15 0.00 12.21 22.86 15.98 21.43 58 ER9a ExonRegion 0 48.84 26.81 99.09 39.45 40.85 51.90 40.59 111.75 89.60 68.15 503.53 19.58 88.55 215.81 420.84 335.55 234.15 421.22 79.28 148.08 261.05 55.41 59.16 59 E9_Da NovelBoundary 0 15.71 17.63 1.83 1.63 3.31 6.64 3.97 0.00 1.79 2.69 97.97 0.00 12.66 18.54 25.22 96.30 55.17 31.75 0.00 46.60 61.78 18.19 17.67 60 E9a_E10a KnownJunction 0 107.35 47.43 118.39 58.63 48.90 64.28 46.77 97.14 70.51 67.77 590.52 23.86 65.90 176.47 502.38 581.56 254.14 496.57 94.59 168.93 248.72 84.87 85.96 61 ER10a ExonRegion 0 36.47 27.03 68.93 19.12 18.44 27.87 19.04 65.95 68.79 51.85 412.60 11.62 26.58 146.38 400.72 274.35 201.52 329.33 60.82 120.37 189.86 61.72 48.59 62 ER10b ExonRegion 0 2.12 0.00 0.00 0.82 0.00 0.00 0.53 1.04 1.48 1.15 5.80 0.00 2.81 0.32 2.32 9.51 1.98 4.07 1.91 2.98 1.76 0.00 2.35