Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF23 Gene 0 3.82 3.72 4.24 2.93 3.88 4.82 2.84 4.03 8.48 5.73 4.06 0.98 0.91 6.10 3.56 4.08 4.72 6.05 3.31 5.33 4.18 2.40 2.55 2 428724 Transcript 0 5.25 3.25 1.70 2.77 3.40 3.53 2.04 5.60 7.66 3.90 3.12 2.85 0.13 4.59 1.59 5.73 3.66 2.82 1.68 3.99 4.25 2.11 1.87 3 357254 Transcript 0 3.33 3.35 0.00 0.00 8.32 2.90 3.93 0.00 8.65 8.41 0.00 0.00 0.00 0.00 0.00 0.00 8.70 5.39 4.42 5.69 0.00 0.00 0.00 4 497160 Transcript 0 1.19 2.17 1.30 4.74 0.00 0.25 0.17 3.31 3.70 7.23 0.00 0.00 2.46 1.30 2.35 0.00 0.00 1.96 4.34 3.03 1.87 0.52 1.19 5 417828 Transcript 0 1.31 0.63 1.07 0.23 1.60 1.65 1.86 0.29 3.67 2.33 1.54 0.00 0.00 1.74 2.17 1.05 0.96 4.48 0.53 2.06 1.88 1.29 2.36 6 393539 Transcript 0 3.56 0.00 0.00 1.96 3.40 0.00 0.00 1.81 4.80 1.24 2.05 0.00 0.00 2.24 11.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 358700 Transcript 0 9.93 45.39 52.75 21.28 7.89 42.70 30.38 43.00 41.46 70.89 6.84 0.00 7.14 0.00 0.00 19.40 8.23 131.28 44.05 58.42 11.55 16.78 12.38 8 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER2a ExonRegion 0 0.65 0.00 0.00 0.00 0.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER3a ExonRegion 0 1.81 0.00 0.00 1.06 0.52 1.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER4a ExonRegion 0 0.00 0.00 0.68 0.30 0.00 0.22 0.00 2.79 4.21 0.00 0.00 0.00 1.88 1.39 0.73 3.35 0.16 0.00 0.00 0.42 0.29 0.34 0.00 15 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER5a ExonRegion 0 0.78 1.18 0.24 1.05 1.64 0.10 0.30 4.41 9.91 0.00 0.64 0.27 0.00 2.12 0.10 4.59 2.78 0.00 0.00 1.44 2.07 0.55 0.75 17 E5a_E6a KnownJunction 0 2.96 3.29 1.39 2.86 11.04 0.00 2.25 11.58 19.27 0.00 2.68 5.70 0.00 7.42 0.00 10.85 0.00 0.00 0.00 0.00 3.15 0.00 4.35 18 ER6a ExonRegion 0 2.22 0.71 0.71 0.85 2.16 0.80 0.32 3.15 9.22 0.00 1.20 1.47 0.00 2.55 1.01 4.04 3.27 0.22 0.00 2.11 2.76 1.03 1.34 19 E6_Da NovelBoundary 0 0.00 0.00 4.49 7.72 3.99 2.33 6.54 0.00 3.36 6.58 0.00 0.00 0.00 4.59 0.00 4.10 0.00 0.00 18.82 10.55 0.00 0.00 0.00 20 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.78 0.00 0.00 0.00 0.00 4.35 21 ER7a ExonRegion 0 1.79 0.84 0.00 0.00 0.00 0.03 0.54 2.31 8.79 1.07 0.86 0.00 0.00 2.17 0.00 0.89 1.57 0.95 0.00 2.63 1.26 0.97 2.25 22 E7_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.81 9.06 0.00 0.00 0.00 0.00 0.00 0.00 3.93 0.00 1.53 0.00 0.00 0.00 0.00 0.00 23 E7_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.34 4.40 0.00 0.00 0.00 0.00 2.47 0.00 0.00 3.65 0.00 0.00 0.00 3.03 0.00 3.93 24 ER7b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.83 0.00 3.46 11.12 1.15 1.93 0.00 0.00 8.12 0.00 2.97 3.30 0.00 0.00 0.00 2.20 2.08 2.94 25 ER7c ExonRegion 0 7.34 8.96 2.37 0.60 9.78 6.25 3.27 5.08 13.12 5.73 13.41 0.00 0.00 9.95 1.54 11.70 11.86 6.24 2.99 2.93 7.51 4.49 6.24 26 E7a_E8a KnownJunction 0 26.82 28.15 5.97 4.73 29.88 18.00 12.37 9.65 19.44 13.32 37.33 0.00 0.00 11.89 4.45 31.96 34.32 17.49 9.22 14.45 24.15 10.84 20.32 27 ER7d ExonRegion 0 19.58 24.40 6.13 1.36 21.41 31.17 13.24 8.64 18.84 14.34 30.93 0.00 0.00 10.96 7.98 32.69 29.71 24.48 7.96 14.36 23.69 11.46 9.54 28 ER7e ExonRegion 0 3.95 5.43 18.42 9.00 10.60 8.99 5.73 11.38 19.66 18.26 7.60 2.64 1.43 12.85 9.33 10.65 13.71 22.68 13.38 16.04 7.60 4.62 7.00 29 E7_Db NovelBoundary 0 12.82 19.01 12.68 12.89 4.33 2.16 10.29 20.00 13.63 16.20 18.16 7.05 0.00 9.48 24.60 3.76 16.46 0.00 8.75 5.56 0.00 8.82 3.67 30 E7b_E8a KnownJunction 0 2.82 0.00 7.16 4.89 0.00 2.90 4.06 6.24 6.02 6.58 2.63 0.00 0.00 14.42 0.00 3.67 9.54 16.17 4.80 5.94 0.00 0.00 3.67 31 ER8a ExonRegion 0 20.48 15.08 13.27 5.87 22.11 21.10 18.96 7.10 31.73 25.30 28.28 2.40 1.44 25.49 14.02 18.06 27.42 42.24 12.84 22.85 28.89 10.32 14.95 32 E8_Da KnownBoundary 0 0.00 3.35 7.63 0.00 3.99 5.28 9.41 2.38 8.33 6.02 7.05 0.00 0.00 4.53 0.00 4.19 9.16 12.64 0.00 4.86 0.00 5.39 4.27 33 E8a_E9a KnownJunction 0 6.89 2.43 1.80 3.43 4.33 0.00 1.94 0.00 19.04 7.01 4.69 0.00 8.28 2.47 0.00 0.00 3.83 8.33 0.00 3.26 2.72 2.94 8.71 34 E8a_E10b KnownJunction 0 3.33 3.35 0.00 0.00 8.32 2.90 3.93 0.00 8.65 8.41 0.00 0.00 0.00 0.00 0.00 0.00 8.70 5.39 4.42 5.69 0.00 0.00 0.00 35 ER8b ExonRegion 0 1.80 0.87 1.97 0.00 0.79 2.21 4.27 0.00 3.59 2.40 2.68 0.00 0.00 2.80 2.15 1.65 1.22 6.06 0.00 1.93 0.12 2.82 2.66 36 E8_Db NovelBoundary 0 0.00 0.00 1.66 5.16 11.63 2.90 4.24 6.12 5.82 7.01 6.79 0.00 0.00 11.54 0.00 3.42 4.77 6.01 0.00 0.00 11.74 0.00 3.50 37 E8b_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 I8 Intron 0 3.45 4.61 5.46 2.94 2.91 2.99 4.20 3.73 7.67 6.04 5.08 1.38 2.40 14.40 5.29 6.73 7.18 16.56 7.21 11.18 8.98 2.64 10.37 39 I8_SR1 SilentIntronRegion 0 3.50 5.29 5.58 3.16 3.34 3.33 4.64 4.00 8.39 6.68 4.93 1.59 2.35 15.51 5.49 7.12 7.85 17.47 7.40 11.74 9.27 2.95 11.40 40 E9_Aa NovelBoundary 0 0.00 13.35 9.93 5.43 8.66 5.79 6.76 4.07 18.14 5.00 14.79 7.65 8.28 21.96 5.07 23.33 8.88 28.06 0.00 12.02 0.00 6.18 4.35 41 ER9a ExonRegion 0 8.13 2.20 1.10 1.69 3.32 5.50 3.20 0.69 13.61 4.45 7.62 3.64 2.91 12.38 11.95 2.97 7.66 5.84 6.50 7.62 10.18 0.88 7.93 42 E9_Da NovelBoundary 0 9.56 2.70 5.14 10.02 0.00 9.82 4.50 4.72 15.48 9.16 12.21 0.00 0.00 12.36 6.30 19.05 15.90 6.63 17.22 9.33 11.61 6.12 7.60 43 E9a_E10b KnownJunction 0 3.56 0.00 0.00 1.96 3.40 0.00 0.00 1.81 4.80 1.24 2.05 0.00 0.00 2.24 11.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 E9a_E10c KnownJunction 0 6.74 0.00 0.00 0.00 0.00 0.00 2.16 0.00 6.34 0.00 5.11 0.00 0.00 0.00 0.00 0.00 4.77 1.95 0.00 2.56 0.00 0.00 0.00 45 I9 Intron 0 4.38 5.73 4.10 2.86 9.54 5.89 5.13 3.74 11.50 10.00 7.65 4.89 5.68 16.19 5.12 10.59 9.59 11.00 6.03 7.68 6.11 2.93 6.59 46 I9_SR1 SilentIntronRegion 0 4.39 5.74 4.11 2.86 9.55 5.90 5.14 3.75 11.52 10.02 7.67 4.89 5.69 16.22 5.13 10.61 9.60 11.01 6.04 7.69 6.12 2.94 6.60 47 ER10a ExonRegion 0 2.12 1.02 1.23 0.68 4.01 2.75 1.32 0.86 7.41 4.59 1.93 0.00 0.00 2.44 4.35 1.49 1.65 7.39 1.59 4.26 5.51 1.04 4.40 48 ER10b ExonRegion 0 5.84 5.69 3.09 1.72 18.89 12.10 12.60 7.50 19.89 13.14 14.30 0.00 0.56 12.90 4.93 14.62 6.73 10.68 7.26 13.49 18.03 7.17 2.70 49 E10_Ac KnownBoundary 0 5.85 19.21 7.63 3.86 41.34 29.19 38.77 16.27 29.31 22.24 22.32 0.00 0.00 25.02 8.90 29.39 12.16 25.29 4.80 23.97 24.28 8.88 7.43 50 ER10c ExonRegion 0 14.21 22.01 12.86 6.13 13.87 23.29 17.76 21.18 44.47 32.86 32.12 6.05 10.65 42.94 15.27 23.42 29.81 30.71 14.79 39.29 33.72 11.81 16.04 51 E10_Da NovelBoundary 0 3.26 5.79 4.67 0.00 0.00 2.21 6.40 2.01 5.06 8.11 7.11 0.00 0.00 12.18 0.00 7.26 8.98 5.93 0.00 14.64 11.18 5.94 7.26 52 E10a_E11a KnownJunction 0 18.82 17.69 20.76 9.66 23.01 39.24 12.10 21.48 54.48 30.25 23.95 12.75 6.17 35.85 33.25 23.75 26.83 30.51 32.00 52.86 33.24 8.63 27.57 53 I10 Intron 0 5.31 7.35 2.70 3.75 4.94 4.20 3.03 3.61 7.20 9.21 8.56 1.90 2.00 6.32 3.69 6.14 8.53 7.52 7.05 6.91 6.99 2.00 4.77 54 I10_SR1 SilentIntronRegion 0 4.95 5.18 0.42 0.00 1.46 2.04 1.99 0.94 2.44 3.75 7.69 0.00 1.07 3.10 3.56 2.70 5.40 2.60 6.81 4.64 1.20 0.00 0.00 55 I10_AR1 ActiveIntronRegion 0 5.35 7.53 2.86 4.01 5.19 4.36 3.11 3.81 7.55 9.61 8.64 2.03 2.07 6.56 3.71 6.40 8.77 7.88 7.09 7.09 7.41 2.14 5.11 56 E11_Aa NovelBoundary 0 0.00 6.71 1.30 1.40 14.69 8.01 16.69 4.56 13.19 7.71 4.95 0.00 0.00 7.06 0.00 16.24 7.57 0.00 0.00 4.92 8.40 0.00 4.27 57 ER11a ExonRegion 0 26.34 22.76 16.91 15.93 17.59 34.10 13.22 26.49 51.09 30.32 21.83 4.53 5.04 44.62 20.98 23.75 27.05 26.33 16.43 31.28 29.59 13.87 14.36 58 E11a_E12a KnownJunction 0 3.33 5.13 1.36 6.99 0.00 0.00 0.00 2.18 6.34 10.13 0.00 0.00 6.82 3.00 4.45 0.00 0.00 2.20 4.80 6.52 2.66 0.00 0.00 59 E11a_E13a KnownJunction 0 38.30 21.44 13.57 17.75 17.57 23.23 15.85 32.57 32.55 28.18 19.22 18.01 0.00 26.72 13.35 34.69 21.60 21.85 12.42 24.48 28.36 13.59 8.37 60 E11a_E13b KnownJunction 0 0.00 5.66 0.00 0.00 8.23 0.00 3.36 0.00 9.75 1.29 5.37 0.00 0.00 0.00 0.00 0.00 0.00 2.45 0.00 0.00 0.00 0.00 4.10 61 E12_Aa NovelBoundary 0 142.03 56.96 38.97 43.72 79.80 82.68 94.46 44.28 26.68 32.96 25.90 10.95 49.67 15.25 13.97 23.50 63.86 23.42 80.85 64.56 50.60 34.66 67.27 62 ER12a ExonRegion 0 0.24 1.39 0.85 3.10 0.00 0.74 0.51 2.66 4.75 5.15 0.00 0.00 0.56 0.89 2.60 0.00 0.00 1.35 3.03 2.57 2.96 1.55 3.57 63 E12_Da NovelBoundary 0 115.65 111.56 156.38 161.82 120.97 32.88 141.94 138.91 118.08 116.37 39.85 71.27 49.19 5.24 59.21 121.34 93.13 183.89 74.73 157.81 72.59 17.82 57.19 64 E12a_E13b KnownJunction 0 0.00 0.00 1.69 4.13 0.00 0.00 0.00 5.09 0.00 6.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.32 5.18 0.00 0.00 0.00 0.00 65 E13_Ab NovelBoundary 0 14.37 0.00 3.13 0.00 0.00 0.00 11.97 0.00 1.74 1.67 0.00 0.00 0.00 2.24 0.00 0.00 0.00 0.00 0.00 3.07 0.00 0.00 0.00 66 ER13a ExonRegion 0 30.16 21.35 8.88 17.72 17.39 27.51 11.25 27.22 29.64 29.25 22.23 17.32 0.00 26.39 8.70 27.49 25.58 17.55 12.74 28.72 25.89 15.11 6.61 67 ER13b ExonRegion 0 11.96 8.27 3.82 4.31 4.46 9.21 5.10 6.44 13.23 7.42 6.58 1.12 0.86 9.88 4.04 5.61 4.57 5.93 3.68 5.19 4.29 5.11 2.35 68 E13_Ac KnownBoundary 0 27.19 9.54 0.00 0.00 4.24 0.00 0.00 0.00 1.07 0.00 5.37 6.00 6.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 69 ER13c ExonRegion 0 0.99 0.24 0.00 0.00 0.22 0.00 0.00 0.00 0.01 0.00 0.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.40 0.00 0.00 70 E13_Da KnownBoundary 0 42.97 63.34 120.90 61.73 60.61 60.65 69.60 83.91 76.33 111.96 18.00 12.15 0.00 5.06 0.00 37.77 45.72 152.05 62.03 98.50 28.85 59.34 51.47 71 E13a_E13d KnownJunction 0 9.93 45.39 52.75 21.28 7.89 42.70 30.38 43.00 41.46 70.89 6.84 0.00 7.14 0.00 0.00 19.40 8.23 131.28 44.05 58.42 11.55 16.78 12.38 72 ER13d ExonRegion 0 0.00 0.00 0.00 0.00 0.03 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 73 E13_Ad KnownBoundary 0 9.93 45.91 7.75 21.11 58.74 59.51 46.59 24.52 21.82 41.37 24.27 0.00 0.00 5.06 0.00 19.14 38.06 17.41 47.15 58.55 5.99 25.04 11.69 74 ER13e ExonRegion 0 0.00 0.15 0.00 0.00 0.21 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 75 E13_Db KnownBoundary 0 0.00 5.00 0.00 0.00 22.33 0.00 0.00 2.55 0.00 1.07 4.84 0.00 0.00 4.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 76 ER13f ExonRegion 0 1.63 3.68 3.79 4.48 3.66 5.02 1.62 0.51 1.85 1.70 0.74 0.96 0.76 1.46 4.09 0.00 1.28 0.94 0.00 0.42 0.00 1.65 0.00 77 ER13g ExonRegion 0 5.86 15.02 9.52 9.02 10.91 14.95 7.43 1.33 3.23 3.71 2.97 6.33 2.16 5.87 14.06 0.00 4.06 0.99 0.00 1.15 0.00 4.17 0.00