Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DDX19B Gene 0 67.92 90.06 111.27 64.43 73.91 65.98 65.93 84.51 75.19 95.93 127.04 79.74 74.61 100.03 101.84 114.93 97.32 109.78 87.55 81.76 54.64 48.05 41.01 2 451014 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.03 0.00 0.00 0.00 3 355992 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 393657 Transcript 0 0.00 6.51 4.14 2.00 0.00 0.00 1.81 10.51 7.78 16.55 10.53 11.40 0.00 0.00 0.00 0.00 13.00 3.77 3.67 9.20 6.18 2.45 0.00 5 288071 Transcript 0 41.73 61.22 68.94 57.69 74.97 59.12 47.54 62.93 57.94 57.40 18.42 25.93 22.46 26.09 26.21 31.51 24.39 52.69 49.44 44.72 17.93 19.41 26.15 6 417604 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.06 0.00 0.00 0.00 8 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER2a ExonRegion 0 1.73 1.66 0.00 1.12 3.89 9.00 1.08 0.00 1.01 1.04 0.70 0.00 0.00 5.76 0.00 4.86 3.00 0.00 0.00 3.48 1.80 0.00 0.00 10 ER2b ExonRegion 0 28.93 2.71 0.41 1.36 12.19 17.73 5.59 0.00 2.74 4.21 16.11 0.00 0.00 15.16 13.54 17.17 16.87 3.90 10.97 6.62 8.33 6.71 1.96 11 ER2c ExonRegion 1 154.84 46.63 38.04 15.85 32.91 84.87 67.64 39.96 38.88 51.18 125.45 15.75 19.92 75.36 100.08 127.80 92.66 122.10 89.44 75.35 49.19 38.61 39.80 12 E2a_E3a KnownJunction 1 6.52 8.68 19.10 9.76 3.31 25.95 2.08 18.57 13.86 42.74 238.48 35.41 27.27 42.91 42.52 29.56 171.01 16.66 11.48 48.64 72.96 13.59 21.68 13 E2a_E4a NovelJunction 0 0.00 3.29 10.38 1.50 0.00 0.00 0.00 6.94 7.32 17.14 17.43 0.00 6.66 0.00 5.93 0.00 9.35 0.00 0.00 5.05 17.73 5.94 0.00 14 E2a_E5a KnownJunction 0 0.00 6.51 4.14 2.00 0.00 0.00 1.81 10.51 7.78 16.55 10.53 11.40 0.00 0.00 0.00 0.00 13.00 3.77 3.67 9.20 6.18 2.45 0.00 15 I2 Intron 0 13.75 9.90 13.31 9.17 13.67 5.45 8.84 9.19 9.85 9.75 2.00 5.12 9.32 1.68 8.58 8.51 6.76 7.04 5.96 12.42 1.21 2.48 6.08 16 I2_AR1 ActiveIntronRegion 0 26.25 15.79 25.10 18.95 27.46 8.97 13.42 16.04 18.21 18.22 2.17 5.79 16.98 1.82 10.62 9.26 7.24 7.16 5.22 16.10 1.64 4.27 8.80 17 E3_Aa NovelBoundary 0 30.60 15.19 19.28 13.88 56.79 20.50 19.08 6.12 8.22 13.91 0.00 12.00 11.85 0.00 0.00 11.19 13.93 2.57 0.00 18.09 0.00 0.00 0.00 18 ER3a ExonRegion 1 14.95 16.43 40.91 10.65 9.39 20.85 15.19 52.95 32.79 55.33 304.92 77.93 44.51 125.45 119.31 96.87 206.20 68.82 82.95 109.16 72.45 50.68 34.28 19 E3a_E4a KnownJunction 0 36.75 34.14 69.96 12.92 24.96 28.51 37.05 72.58 47.34 58.32 250.27 109.99 94.31 239.21 228.57 177.56 194.02 110.60 152.66 140.75 57.89 115.49 56.00 20 I3 Intron 0 6.03 8.48 12.34 11.69 23.03 3.39 11.11 4.08 6.61 8.21 0.51 6.42 9.85 2.21 4.14 4.08 2.61 3.68 5.05 7.53 0.70 0.77 2.48 21 I3_SR1 SilentIntronRegion 0 5.35 8.30 11.00 14.21 28.33 2.49 12.48 5.25 8.58 8.97 0.75 9.24 10.08 2.51 4.34 4.62 2.88 5.88 5.26 10.14 0.64 1.21 3.71 22 E4_Aa NovelBoundary 0 2.89 5.79 10.88 12.65 58.06 4.43 10.60 7.15 10.13 12.38 0.00 0.00 14.28 4.47 4.45 0.00 18.61 2.16 19.77 11.31 5.44 2.39 0.00 23 ER4a ExonRegion 0 33.67 38.37 105.18 35.01 61.20 67.07 51.32 107.00 77.79 95.79 225.15 139.75 215.39 227.62 210.50 380.93 182.47 287.98 187.11 152.92 68.03 102.79 88.04 24 E4a_E5a KnownJunction 1 31.56 48.74 133.94 59.90 94.40 128.11 78.52 143.06 101.65 122.38 226.00 285.99 254.37 186.95 200.26 560.88 185.13 377.64 284.06 133.59 82.97 95.03 119.59 25 I4 Intron 0 8.58 5.11 11.23 9.93 18.69 2.56 7.59 4.32 3.09 5.01 0.00 3.59 8.13 2.26 4.53 4.15 4.61 4.50 5.34 7.43 0.62 0.00 1.64 26 I4_SR1 SilentIntronRegion 0 8.67 5.17 11.35 10.04 18.90 2.59 7.68 4.37 3.12 5.07 0.00 3.63 8.22 2.28 4.58 4.20 4.66 4.55 5.40 7.51 0.62 0.00 1.66 27 E5_Aa NovelBoundary 0 16.89 17.17 28.18 29.90 58.49 11.24 28.97 11.58 15.54 20.23 0.00 6.30 20.13 14.89 10.75 15.98 3.93 20.81 17.98 15.02 3.15 0.00 16.13 28 ER5a ExonRegion 0 26.52 65.45 155.80 73.12 52.77 97.56 88.95 156.98 131.95 181.82 350.30 217.36 168.53 247.83 196.67 315.72 259.31 305.92 215.83 168.84 140.19 122.87 96.69 29 E5a_E6a KnownJunction 0 64.09 141.49 190.68 104.68 110.10 86.65 136.55 218.10 155.87 204.93 379.62 218.62 178.88 327.86 365.54 354.35 238.15 269.65 295.44 201.15 187.31 150.70 115.84 30 E5a_E7a KnownJunction 0 14.15 25.32 15.88 7.99 0.00 26.35 13.34 15.07 9.78 22.83 12.85 24.61 27.27 14.66 13.35 6.66 26.65 11.52 14.21 14.96 3.15 11.70 7.00 31 Ix Intron 0 2.23 6.42 8.64 7.47 23.92 7.71 6.96 5.42 4.84 8.99 2.03 6.03 18.28 2.96 4.31 12.50 1.74 3.87 3.35 7.83 2.29 2.19 7.72 32 Ix_SR1 SilentIntronRegion 0 2.25 6.48 8.73 7.55 24.17 7.79 7.03 5.47 4.89 9.08 2.05 6.09 18.47 2.99 4.35 12.63 1.72 3.91 3.38 7.91 2.32 2.21 7.80 33 E6_Aa NovelBoundary 0 10.45 15.33 36.52 39.95 24.62 2.56 16.61 18.89 11.00 11.82 2.32 7.65 0.00 0.00 9.02 11.79 7.11 27.48 0.00 22.37 2.78 8.88 32.27 34 ER6a ExonRegion 0 161.38 153.04 220.54 90.26 99.98 84.57 108.58 198.08 183.20 237.53 566.07 255.90 264.76 340.98 274.18 379.54 362.42 311.83 260.93 203.18 196.30 153.73 112.51 35 E6_Da NovelBoundary 0 26.82 15.52 45.47 38.52 33.36 2.84 13.34 29.29 15.22 22.21 4.74 6.30 20.13 10.18 9.27 21.28 17.86 22.01 14.12 48.13 11.86 6.00 11.78 36 E6a_E7a KnownJunction 0 184.11 198.45 155.61 74.52 105.94 53.72 89.47 119.24 111.75 144.25 288.02 246.83 192.03 247.81 215.84 238.57 254.70 187.37 120.76 129.37 125.72 91.67 62.06 37 Ix_AR1 ActiveIntronRegion 0 19.88 17.74 2.43 1.36 19.75 16.00 11.55 0.00 2.47 2.28 0.00 7.18 5.18 5.77 6.87 11.97 6.65 8.63 2.14 15.71 2.93 1.40 9.85 38 Ix_SR2 SilentIntronRegion 0 10.86 11.79 12.84 7.14 19.41 8.80 10.12 7.47 7.08 7.91 2.16 5.31 6.21 4.38 7.41 8.96 7.37 6.21 6.76 10.09 2.71 5.35 5.74 39 E7_Aa NovelBoundary 0 35.41 43.41 49.11 44.35 18.68 0.00 14.88 13.47 25.17 13.40 4.58 19.51 6.82 9.65 13.35 29.05 13.09 15.67 20.80 24.42 6.30 8.63 7.77 40 ER7a ExonRegion 0 217.38 283.26 274.94 118.43 143.97 140.74 157.32 200.89 176.72 242.78 432.27 339.67 251.39 305.81 268.18 358.93 269.87 347.95 252.32 222.62 157.45 141.44 101.16 41 E7a_E8a KnownJunction 0 181.14 296.20 265.34 126.02 143.12 114.08 138.85 180.81 139.67 203.88 406.79 213.37 231.32 321.15 382.97 378.19 272.65 300.25 281.42 212.59 119.60 146.84 160.23 42 Ix Intron 0 7.72 12.72 13.64 9.53 19.76 5.10 12.08 6.49 6.88 8.91 2.35 7.35 8.61 3.55 6.23 10.33 13.19 9.27 9.41 9.98 5.17 2.53 3.57 43 Ix_SR1 SilentIntronRegion 0 7.79 12.83 13.75 9.61 19.92 5.14 12.18 6.55 6.93 8.98 2.37 7.41 8.68 3.58 6.28 10.42 13.31 9.35 9.49 10.07 5.21 2.56 3.60 44 E8_Aa NovelBoundary 0 28.38 15.59 27.47 24.41 36.59 10.73 11.92 13.68 10.79 14.91 7.69 6.30 27.11 9.71 5.81 23.58 4.02 13.47 27.01 14.19 0.00 0.00 11.95 45 ER8a ExonRegion 0 117.77 238.25 256.91 136.17 166.01 113.47 148.42 144.72 127.26 195.86 317.90 236.80 232.14 282.10 268.98 311.07 233.65 236.32 188.32 190.30 126.13 115.30 112.38 46 E8_Da NovelBoundary 1 26.52 43.15 54.37 35.36 27.59 0.00 17.93 47.44 28.67 34.57 5.37 31.51 41.88 7.71 4.45 12.56 11.31 18.78 9.04 28.95 10.93 18.00 7.94 47 E8a_E9a KnownJunction 0 89.50 163.66 273.53 112.37 136.50 94.21 149.09 132.18 115.36 192.82 277.28 191.91 189.27 197.25 177.27 266.85 219.17 178.62 144.95 148.03 96.00 86.95 56.17 48 E9_Aa NovelBoundary 0 75.79 20.33 36.99 11.82 34.38 19.19 25.53 16.63 10.04 19.96 2.53 0.00 6.82 4.77 31.77 3.76 4.77 32.08 17.69 21.48 7.72 0.00 16.39 49 ER9a ExonRegion 0 75.28 188.86 178.42 88.18 73.55 69.77 106.65 120.76 95.94 176.22 228.16 122.10 110.90 191.38 174.78 211.96 163.15 152.83 109.20 133.06 91.40 70.72 49.43 50 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 Ix Intron 0 15.55 9.48 27.34 10.04 10.58 5.96 7.48 17.10 13.00 18.59 7.10 6.66 3.82 9.56 16.37 28.55 19.59 31.91 11.70 15.93 5.60 7.65 7.47 52 Ix_AR1 ActiveIntronRegion 0 15.64 9.53 27.49 10.10 10.64 5.99 7.52 17.19 13.07 18.70 7.14 6.69 3.84 9.61 16.46 28.70 19.69 32.09 11.76 16.02 5.63 7.69 7.51 53 E10_Aa NovelBoundary 0 18.30 9.21 26.99 14.42 0.00 0.00 10.51 29.24 18.84 16.39 0.00 5.55 0.00 4.94 4.45 8.46 18.23 23.96 0.00 9.78 6.12 0.00 4.35 54 ER10a ExonRegion 0 60.29 125.03 168.47 92.40 57.93 55.27 65.27 116.81 96.51 150.93 194.53 77.06 58.11 155.49 131.51 154.36 133.02 149.57 82.79 102.27 92.38 55.80 43.03 55 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 56 Ix_AR1 ActiveIntronRegion 0 11.03 9.42 7.67 2.94 20.70 1.83 11.29 1.73 5.46 3.08 1.42 6.38 6.91 14.10 7.18 9.23 2.61 1.75 3.19 10.64 4.06 0.00 2.78 57 E11_Aa NovelBoundary 0 17.19 6.18 12.03 20.28 10.87 8.18 18.06 8.71 7.90 18.64 9.95 5.40 6.82 7.48 0.00 3.59 11.22 18.78 9.51 19.43 3.15 2.57 12.72 58 ER11a ExonRegion 0 110.16 92.38 181.32 78.77 52.58 38.42 61.11 78.41 85.84 129.98 163.11 55.11 48.60 138.54 144.81 118.43 125.68 136.76 81.24 102.23 78.22 50.48 40.59 59 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 60 Ix Intron 0 9.07 8.54 17.73 7.82 13.11 7.38 10.89 12.17 13.04 13.16 9.47 7.02 7.46 13.52 19.36 27.30 15.88 20.25 15.05 13.40 6.75 8.20 14.39 61 Ix_SR1 SilentIntronRegion 0 9.10 8.57 17.79 7.84 13.15 7.40 10.92 12.21 13.09 13.20 9.50 7.04 7.48 13.57 19.43 27.39 15.93 20.32 15.10 13.45 6.77 8.23 14.44 62 ER12a ExonRegion 1 36.05 68.80 72.78 36.76 42.03 52.49 57.88 45.07 41.14 50.25 62.65 61.31 98.49 69.44 120.69 83.48 63.89 55.50 56.94 37.16 31.79 30.63 23.68 63 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 64 ER13a ExonRegion 0 100.27 97.55 139.39 73.53 113.11 81.14 82.53 91.48 81.22 91.81 140.91 125.93 128.33 94.78 158.81 100.76 122.21 70.30 87.93 76.71 52.05 62.35 28.63 65 E13_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 66 E13_Db KnownBoundary 1 19.04 41.11 40.68 21.51 45.42 29.81 43.90 37.75 26.13 21.52 7.05 43.96 14.61 6.95 4.82 0.00 12.62 17.33 34.92 13.29 13.71 24.19 4.01 67 ER13b ExonRegion 1 33.86 69.82 79.65 54.06 62.43 71.52 63.11 59.34 65.87 76.46 25.77 60.61 32.83 30.32 32.88 44.58 19.81 67.75 67.95 41.13 17.63 25.70 14.68 68 ER13c ExonRegion 0 41.73 61.22 68.94 57.69 74.97 59.12 47.54 62.93 57.94 57.40 18.42 25.93 22.46 26.09 26.21 31.51 24.39 52.69 49.44 44.72 17.93 19.41 26.15