Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GALNS Gene 0 47.01 13.39 48.32 18.63 28.30 24.54 26.55 32.24 44.29 38.40 23.95 23.15 15.75 39.21 32.07 59.08 22.51 36.04 45.79 19.06 182.96 95.33 96.59 2 268695 Transcript 0 17.40 6.61 28.85 10.05 14.81 18.94 17.30 15.81 27.69 21.04 15.67 14.42 1.90 20.30 19.90 26.77 7.37 19.19 24.25 8.65 110.00 48.03 47.13 3 439266 Transcript 0 0.00 2.50 0.00 0.00 0.00 0.00 2.25 0.00 5.96 3.33 2.42 0.00 0.00 2.47 0.00 8.29 3.55 10.32 17.22 6.26 7.60 9.00 16.48 4 ER1a ExonRegion 0 3.35 0.00 0.00 0.00 2.12 6.95 10.87 0.00 0.67 0.00 0.48 0.00 0.00 0.00 0.73 4.46 0.96 1.77 5.97 2.93 8.91 2.95 14.68 5 ER1b ExonRegion 0 5.45 2.67 8.11 1.96 2.68 11.36 11.16 2.09 5.03 6.18 6.47 2.36 3.19 5.62 10.08 14.70 7.28 3.59 7.77 5.45 49.66 19.89 23.13 6 E1a_E2a KnownJunction 0 0.00 3.29 28.41 2.06 0.00 2.44 12.10 6.37 22.68 15.74 19.53 13.95 0.00 14.13 20.15 11.28 4.68 14.14 4.80 6.52 120.40 39.50 43.88 7 E1a_E3a KnownJunction 0 0.00 2.50 0.00 0.00 0.00 0.00 2.25 0.00 5.96 3.33 2.42 0.00 0.00 2.47 0.00 8.29 3.55 10.32 17.22 6.26 7.60 9.00 16.48 8 I1 Intron 0 11.15 1.79 5.11 2.26 6.87 2.15 6.40 5.03 5.57 3.56 2.79 5.34 3.10 6.61 7.14 13.41 6.26 9.01 10.46 6.06 15.50 7.45 25.17 9 I1_AR2 ActiveIntronRegion 0 3.07 0.32 4.71 1.28 3.21 0.41 3.93 3.78 4.69 4.68 3.64 1.05 0.00 8.70 8.40 14.20 4.07 5.45 7.44 5.69 10.32 0.90 9.83 10 I1_SR3 SilentIntronRegion 0 13.02 1.39 4.00 1.44 3.84 1.89 3.85 2.22 5.77 3.16 3.80 0.96 1.43 9.60 9.91 8.74 11.42 7.77 8.76 7.63 11.86 4.31 13.39 11 I1_AR3 ActiveIntronRegion 0 15.61 4.50 3.59 2.75 13.48 2.03 11.23 9.18 10.86 6.72 6.41 15.65 8.20 15.20 11.89 11.69 13.79 7.68 10.57 7.58 18.42 14.60 24.18 12 I1_SR4 SilentIntronRegion 0 6.62 1.23 4.61 2.23 6.98 1.71 4.76 4.32 3.94 2.81 2.23 2.79 1.82 5.02 5.72 13.30 5.71 7.92 8.66 4.97 15.06 4.69 24.83 13 I1_AR5 ActiveIntronRegion 1 10.27 3.67 3.68 2.73 5.74 0.00 4.84 6.91 4.94 1.15 0.00 4.75 1.14 1.62 16.49 18.05 1.77 4.37 7.69 4.62 19.56 5.03 24.21 14 I1_AR6 ActiveIntronRegion 0 13.14 0.25 5.21 2.04 9.03 0.84 3.20 5.69 4.84 1.05 0.00 5.41 9.18 4.13 15.96 22.79 3.71 10.47 6.11 9.49 28.46 2.60 22.15 15 I1_AR7 ActiveIntronRegion 0 9.53 1.10 10.87 3.25 6.13 2.72 8.06 5.25 4.53 4.76 2.05 0.64 3.37 6.87 6.64 12.93 4.32 18.49 13.22 9.91 20.37 7.87 25.66 16 I1_SR5 SilentIntronRegion 0 11.37 1.15 8.61 4.01 5.53 3.07 10.57 6.26 7.04 3.43 3.72 3.46 3.08 6.70 11.87 19.56 8.18 16.75 16.74 6.56 17.55 8.03 32.23 17 I1_AR9 ActiveIntronRegion 0 17.32 0.53 4.08 1.83 10.26 3.77 7.85 5.93 8.86 4.20 5.13 18.84 8.33 5.08 9.01 13.51 11.65 10.00 13.50 9.48 24.30 8.37 34.36 18 I1_SR7 SilentIntronRegion 0 12.62 2.24 3.47 1.95 7.21 1.58 5.52 3.59 3.84 3.60 1.15 7.00 2.98 5.30 5.62 11.92 4.52 5.96 12.38 2.59 13.12 8.07 28.59 19 I1_SR8 SilentIntronRegion 0 22.22 4.19 6.67 2.09 8.02 3.78 7.82 7.97 6.73 3.04 1.09 5.71 3.26 7.76 6.83 17.55 5.88 9.55 9.25 8.98 15.28 12.89 28.36 20 I1_SR9 SilentIntronRegion 0 11.86 1.98 5.30 3.26 3.63 2.24 6.84 4.30 10.44 5.78 6.80 2.52 2.09 7.89 4.89 13.25 0.18 7.58 8.05 6.25 17.90 9.69 18.67 21 I1_AR10 ActiveIntronRegion 0 18.26 1.95 4.50 2.99 5.92 3.57 7.56 9.15 11.74 5.40 5.78 3.05 2.42 10.31 4.79 14.41 2.63 12.06 10.69 8.82 22.62 13.23 23.87 22 E2_Aa NovelBoundary 1 14.60 5.72 9.91 4.83 0.00 2.38 11.84 10.51 4.92 1.07 0.00 18.91 0.00 11.89 23.61 20.17 0.00 11.81 8.66 5.94 14.46 10.72 8.45 23 ER2a ExonRegion 0 10.07 4.02 23.53 8.34 6.62 9.51 16.74 21.49 29.42 22.47 21.98 15.71 0.00 25.62 15.58 42.86 10.41 22.47 22.32 11.32 131.01 55.85 63.40 24 E2_Da NovelBoundary 0 14.37 0.00 8.28 2.03 8.23 7.44 4.11 8.71 8.94 1.67 0.00 0.00 0.00 7.06 6.18 11.02 3.83 16.46 16.94 12.91 8.03 5.27 20.57 25 E2a_E3a KnownJunction 0 7.04 5.79 34.00 14.18 22.67 51.11 22.48 11.05 38.54 30.92 11.74 19.51 0.00 21.48 17.80 16.24 0.00 25.25 39.72 0.00 119.35 55.78 19.46 26 I2 Intron 0 13.53 1.13 5.33 3.10 4.83 1.53 3.04 7.34 5.88 2.49 2.55 2.16 0.54 6.74 5.23 9.50 2.98 9.70 10.62 8.28 17.15 8.11 26.12 27 I2_SR1 SilentIntronRegion 0 13.59 1.14 5.35 3.12 4.85 1.54 3.05 7.37 5.91 2.50 2.56 2.17 0.54 6.77 5.25 9.54 2.99 9.74 10.67 8.31 17.21 8.13 26.23 28 E3_Aa NovelBoundary 0 40.60 0.00 9.76 7.06 0.00 0.00 2.08 6.86 14.81 9.03 9.42 0.00 0.00 11.89 4.45 7.60 8.23 19.98 3.58 8.95 31.32 10.96 40.55 29 ER3a ExonRegion 0 48.45 10.90 36.81 12.38 15.59 38.05 37.97 20.10 39.18 36.58 24.92 13.97 23.07 33.44 37.02 78.38 23.33 37.35 60.78 16.00 184.96 112.95 128.86 30 E3a_E4a KnownJunction 0 74.68 31.18 50.23 9.02 33.87 50.54 51.18 44.32 32.26 46.71 17.74 6.30 19.32 33.37 18.67 99.03 17.11 42.16 30.02 21.16 200.47 72.56 76.83 31 ER4a ExonRegion 0 32.98 13.56 42.00 13.42 20.89 25.48 28.01 26.87 37.62 44.12 26.12 15.72 16.89 36.94 25.18 51.51 23.30 28.33 38.41 15.27 220.26 78.61 66.17 32 E4a_E5a KnownJunction 0 80.46 2.43 46.72 18.31 28.10 20.90 16.25 38.28 53.15 65.52 38.69 33.46 27.27 45.32 42.90 74.34 23.19 41.99 83.20 11.25 241.55 136.06 81.09 33 I4_SR1 SilentIntronRegion 0 7.01 0.93 5.31 3.18 5.93 0.00 3.52 4.56 7.50 1.23 1.81 5.27 2.85 1.14 9.33 11.54 0.86 17.98 12.70 6.09 9.98 7.16 16.85 34 I4_AR1 ActiveIntronRegion 0 12.09 0.95 6.02 1.95 7.78 3.34 4.84 5.74 8.32 2.53 5.79 3.53 2.99 3.28 8.52 10.93 3.67 8.63 6.76 6.55 19.23 10.10 19.16 35 I4_SR3 SilentIntronRegion 0 8.54 0.35 6.32 1.68 5.26 1.13 2.94 4.33 4.20 1.09 5.22 1.97 0.36 2.43 9.16 13.79 4.17 12.73 3.49 8.04 13.60 10.24 15.95 36 I4_AR3 ActiveIntronRegion 0 16.80 0.43 5.93 1.55 8.54 1.83 3.29 8.52 7.35 2.71 4.09 2.34 2.13 3.98 5.57 12.55 4.10 12.01 8.41 6.80 15.10 12.73 11.24 37 E5_Aa NovelBoundary 0 74.68 2.50 7.39 7.56 22.75 0.00 3.97 6.70 20.11 4.16 0.00 0.00 0.00 4.94 20.27 12.30 4.02 23.84 25.60 0.00 17.36 25.96 39.86 38 ER5a ExonRegion 0 44.01 12.00 68.26 25.42 26.40 28.93 34.39 40.32 59.29 59.80 32.87 42.45 37.59 53.97 35.52 74.10 26.59 38.25 65.41 18.87 254.45 165.25 116.36 39 E5a_E6a KnownJunction 1 71.79 13.88 51.98 32.40 49.32 52.47 44.16 38.77 65.28 59.36 34.80 86.58 33.28 52.92 27.44 85.79 42.26 33.62 56.47 20.65 273.67 159.64 102.61 40 ER6a ExonRegion 0 85.17 21.40 67.23 28.99 51.32 39.82 58.12 44.09 56.10 57.11 26.60 43.81 37.10 49.01 27.93 82.24 31.93 58.47 69.46 26.33 225.01 172.34 136.71 41 E6a_E7a KnownJunction 0 126.24 23.68 95.06 27.37 63.16 39.35 61.17 65.39 63.31 74.57 34.22 43.81 32.95 33.96 35.48 117.83 33.38 85.15 130.83 27.16 238.89 285.04 215.12 42 ER7a ExonRegion 0 57.55 15.99 59.56 21.49 27.01 29.22 32.32 37.54 63.08 52.56 30.74 50.08 33.84 47.35 37.88 79.87 38.90 45.28 74.97 22.60 213.80 149.21 148.50 43 E7a_E8a KnownJunction 0 37.64 12.56 38.73 22.21 42.36 36.51 31.36 23.82 47.11 41.45 25.69 34.81 6.82 46.09 13.23 46.23 25.62 20.73 47.34 14.64 180.08 90.56 74.95 44 ER8a ExonRegion 0 42.90 11.26 48.96 18.21 26.45 33.89 30.91 34.42 54.47 43.47 22.53 24.86 25.80 41.15 33.24 83.96 30.42 49.52 60.16 30.14 204.99 107.05 130.53 45 E8a_E9a KnownJunction 0 33.12 17.69 56.12 13.62 14.86 33.11 50.96 28.30 62.56 44.91 29.01 32.71 0.00 47.68 15.08 70.15 27.21 36.81 29.65 17.51 243.34 81.75 156.64 46 E8a_E10a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.20 0.00 0.00 0.00 3.50 47 ER9a ExonRegion 0 31.93 14.72 38.43 16.64 18.55 16.01 28.64 26.54 44.04 39.62 32.15 31.85 29.45 44.21 24.44 49.55 25.01 41.79 36.82 26.64 218.44 94.48 84.91 48 E9a_E10a KnownJunction 0 65.49 8.62 39.47 30.60 3.65 24.53 16.34 35.00 39.26 33.20 21.16 24.01 27.27 48.50 13.23 74.51 16.46 50.32 69.84 26.53 197.69 124.00 81.01 49 ER10a ExonRegion 0 35.04 3.34 44.78 14.34 26.33 24.27 20.03 37.33 39.97 43.41 19.87 24.74 22.08 45.87 34.52 61.44 19.30 47.93 44.20 21.68 192.30 111.60 111.19 50 E10a_E11a KnownJunction 0 38.01 4.87 55.50 16.58 42.36 32.65 36.74 66.54 33.94 34.79 21.79 12.60 21.10 32.37 44.26 64.17 25.25 54.06 49.88 29.08 175.20 104.40 86.30 51 ER11a ExonRegion 0 44.39 14.08 48.06 17.69 29.07 24.25 29.59 34.75 58.66 37.60 23.08 23.12 18.03 41.42 24.17 60.45 29.55 51.43 57.52 17.41 198.89 87.37 86.84 52 E11a_E12a KnownJunction 0 82.98 12.50 52.10 19.81 34.80 20.22 33.25 35.45 55.03 54.91 39.22 36.61 22.24 45.15 17.80 62.72 20.76 51.90 67.30 5.11 237.78 97.06 90.91 53 ER12a ExonRegion 0 47.50 12.90 48.46 13.86 20.68 32.11 32.02 36.13 54.99 44.33 27.36 23.14 5.19 51.88 30.82 76.28 33.39 48.19 55.27 18.99 224.40 115.16 116.98 54 E12a_E13a KnownJunction 0 64.16 10.79 55.23 16.25 23.77 16.47 29.94 22.84 49.54 42.17 23.43 24.01 0.00 44.79 8.90 59.47 21.69 36.77 36.14 8.82 194.23 65.70 105.68 55 ER13a ExonRegion 0 35.05 7.72 47.71 17.11 22.49 20.50 21.45 27.67 39.16 40.19 21.75 16.33 6.68 41.21 18.78 48.54 18.85 42.31 26.62 9.74 201.00 89.98 89.79 56 E13_Da NovelBoundary 0 3.56 2.70 9.91 1.43 0.00 2.78 2.03 1.77 1.56 9.86 2.26 6.15 6.82 9.77 9.15 12.48 0.00 15.30 4.80 0.00 18.90 3.12 8.02 57 E13a_E14a KnownJunction 0 26.97 0.00 47.54 20.14 20.20 22.26 14.75 31.26 37.07 43.36 6.69 6.30 6.49 24.31 9.64 27.43 14.21 11.36 9.04 0.00 172.98 73.79 74.27 58 I13 Intron 0 10.95 5.35 20.44 5.89 7.62 6.74 6.16 8.81 13.91 10.12 9.15 5.69 3.35 16.96 11.14 20.95 9.41 25.81 22.40 13.06 24.26 21.18 29.45 59 I13_SR1 SilentIntronRegion 0 5.66 2.82 16.06 4.37 3.70 3.18 4.89 7.44 9.13 8.58 6.11 5.39 2.31 12.09 5.91 15.11 7.62 22.38 15.75 11.07 20.63 12.52 19.30 60 I13_AR1 ActiveIntronRegion 0 8.66 4.90 16.75 4.55 7.13 5.33 5.47 7.61 13.69 9.03 9.32 3.13 1.82 16.48 11.26 18.80 9.84 21.42 24.69 12.50 22.70 21.21 26.75 61 I13_AR2 ActiveIntronRegion 0 17.49 8.56 36.02 10.24 14.13 14.38 8.87 14.85 23.83 16.06 12.86 11.14 7.05 23.32 18.30 33.33 13.48 40.95 29.87 19.56 33.47 34.71 46.90 62 I13_SR2 SilentIntronRegion 1 14.55 8.34 19.00 9.00 8.95 7.38 4.01 5.48 10.08 7.79 11.25 1.41 3.47 23.15 10.99 20.17 0.78 27.89 18.81 7.39 21.07 18.06 35.03 63 I13_AR3 ActiveIntronRegion 0 52.28 10.34 1.33 1.48 5.85 6.68 15.41 0.00 0.00 0.00 8.45 12.62 8.44 18.07 14.92 23.78 9.62 1.35 13.92 3.10 22.45 21.22 38.51 64 E14_Aa NovelBoundary 0 47.64 30.85 51.98 27.80 28.95 25.78 30.52 27.11 49.51 27.48 25.69 33.76 12.50 28.90 29.17 57.85 26.18 44.81 64.75 14.51 42.63 51.99 86.64 65 ER14a ExonRegion 0 79.67 19.68 72.66 25.02 47.15 30.02 35.02 36.54 55.31 56.57 32.99 9.90 15.63 53.65 29.95 67.91 23.60 46.62 41.81 15.95 255.93 110.31 140.28 66 E14_Da KnownBoundary 0 91.87 26.25 96.68 27.90 52.55 34.64 55.42 58.20 72.31 65.89 30.27 26.56 27.11 49.21 17.80 80.92 23.00 60.27 70.21 26.91 230.31 105.93 144.61 67 ER14b ExonRegion 0 66.54 19.93 58.28 25.64 42.62 24.69 24.29 40.12 47.11 36.05 24.62 22.92 9.49 40.27 45.23 59.03 20.79 32.33 48.41 22.50 170.32 86.05 94.23