Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 KIAA1609 Gene 0 18.75 24.39 26.49 21.88 29.05 16.99 27.47 35.93 38.52 34.61 19.40 8.06 15.97 33.39 25.78 26.06 20.81 31.40 22.09 21.14 53.83 21.41 27.39 2 343629 Transcript 0 11.37 16.14 24.90 14.87 19.14 14.96 22.81 31.68 36.24 35.67 24.30 8.87 12.91 47.43 30.48 31.78 33.02 38.69 27.39 24.41 77.99 33.96 39.81 3 ER1a ExonRegion 0 7.85 12.67 4.74 1.35 17.72 21.51 19.58 8.20 4.82 13.02 9.90 0.00 0.00 28.01 19.39 16.56 29.06 14.87 43.66 15.00 24.08 13.21 38.79 4 E1a_E2a KnownJunction 0 10.52 32.95 11.92 0.00 34.55 15.56 23.67 7.76 7.09 26.51 2.47 0.00 0.00 30.37 27.20 24.27 47.78 35.44 42.45 8.50 44.11 32.09 68.72 5 I1_AR2 ActiveIntronRegion 0 3.41 0.55 3.24 0.55 2.15 1.48 2.38 11.34 4.04 2.58 0.69 0.00 1.26 0.72 1.74 0.75 0.00 2.39 1.12 5.63 28.94 0.59 1.89 6 ER2a ExonRegion 0 10.30 6.39 28.08 9.35 15.98 13.95 18.32 37.13 28.98 30.82 22.39 8.12 10.91 49.67 31.73 38.85 36.59 36.29 51.56 24.87 83.58 34.90 47.84 7 E2_Da NovelBoundary 0 6.89 9.41 0.00 1.90 12.14 0.00 8.35 5.75 7.58 6.23 2.32 0.00 7.47 9.89 0.00 3.33 8.42 2.20 21.74 3.26 3.15 8.14 8.02 8 E2a_E3a KnownJunction 0 16.82 0.00 38.29 16.55 27.67 14.76 25.44 40.09 44.88 32.61 25.85 18.61 0.00 62.16 37.70 44.09 38.62 38.72 47.81 32.28 111.69 55.60 72.64 9 ER3a ExonRegion 0 12.50 19.38 35.03 15.22 24.97 19.38 21.56 31.87 49.61 42.58 30.61 8.81 15.45 58.50 36.95 45.14 31.85 47.41 28.96 25.09 104.82 32.44 46.31 10 E3a_E4a KnownJunction 0 17.26 31.38 25.04 11.72 14.94 6.42 15.06 36.31 42.51 44.91 45.27 0.00 6.82 63.16 40.79 39.65 49.56 31.67 31.72 30.42 98.47 35.21 47.89 11 ER4a ExonRegion 0 11.94 11.94 22.74 13.09 17.92 13.23 16.00 32.27 34.84 38.12 27.97 3.22 6.89 47.32 32.35 41.26 32.44 44.28 20.58 18.02 88.67 32.11 38.74 12 E4_Da NovelBoundary 0 0.00 6.05 5.59 3.43 0.00 0.00 0.00 2.22 8.71 1.02 2.26 0.00 6.49 2.35 6.30 15.81 9.16 6.63 4.80 2.81 11.37 0.00 16.39 13 E4a_E5a KnownJunction 0 6.74 5.72 25.43 14.95 25.72 15.45 19.08 25.42 25.14 37.88 27.74 5.40 26.13 33.90 14.71 27.26 39.08 44.19 16.47 17.90 80.00 47.46 33.21 14 ER5a ExonRegion 0 9.46 15.77 29.03 15.56 11.25 13.53 23.35 35.31 45.77 38.26 29.04 10.72 15.81 56.25 35.92 39.88 26.47 44.10 23.54 25.86 91.42 32.54 35.10 15 E5_Da NovelBoundary 0 0.00 0.00 1.83 0.00 0.00 2.90 6.27 6.65 2.92 3.22 0.00 0.00 0.00 2.41 5.44 20.17 8.23 1.87 0.00 2.62 13.96 0.00 8.11 16 E5a_E6a KnownJunction 0 6.82 8.22 33.88 19.41 7.98 5.39 15.85 53.11 44.56 41.66 22.11 18.91 13.64 46.44 10.63 38.88 17.20 44.69 34.17 26.97 74.44 38.70 22.37 17 I5 Intron 0 2.23 3.40 3.53 2.45 3.89 0.91 4.83 3.51 6.98 4.87 0.87 1.03 1.55 4.90 5.08 6.30 4.70 4.15 2.07 5.56 12.41 3.35 7.77 18 I5_AR1 ActiveIntronRegion 0 0.58 0.00 4.90 1.36 4.86 0.33 5.90 1.73 5.05 6.88 1.93 4.33 4.69 5.46 5.80 12.43 3.60 7.56 6.37 8.51 20.23 3.41 13.88 19 I5_AR2 ActiveIntronRegion 0 1.12 2.35 2.81 3.05 3.93 0.51 8.25 3.87 6.15 4.42 0.36 0.66 0.36 4.58 4.56 6.98 3.80 3.12 2.99 4.30 13.10 3.55 7.38 20 I5_SR2 SilentIntronRegion 0 2.59 6.27 4.16 2.86 4.61 0.58 5.59 4.74 8.31 5.56 1.24 1.93 1.96 5.51 5.55 6.29 4.40 4.35 0.68 4.08 11.96 3.77 9.60 21 I5_AR3 ActiveIntronRegion 0 2.85 2.85 4.84 2.52 5.68 0.52 5.09 4.97 8.50 6.83 1.33 0.54 2.57 6.90 8.13 8.08 4.33 12.20 3.02 6.64 14.55 3.25 8.14 22 I5_SR3 SilentIntronRegion 0 2.31 2.18 3.70 2.71 3.58 1.72 3.68 3.26 6.57 3.35 0.95 0.89 1.55 4.78 5.33 5.71 4.96 2.35 2.65 7.95 14.16 3.66 6.25 23 E6_Aa NovelBoundary 0 3.48 0.00 1.60 0.00 0.00 0.00 0.00 2.30 8.07 0.00 2.53 0.00 0.00 0.00 0.00 16.06 7.95 4.97 0.00 3.13 15.32 5.69 20.91 24 ER6a ExonRegion 0 13.43 23.94 29.88 19.33 11.62 22.67 23.53 35.66 43.53 44.14 28.30 18.05 23.33 56.35 38.76 29.95 30.29 41.26 15.79 35.62 104.80 28.14 30.30 25 E6a_E7a KnownJunction 0 10.89 21.05 23.89 21.81 8.66 13.86 32.68 31.42 38.43 38.17 18.74 12.60 34.58 36.79 28.31 18.20 17.77 41.87 8.38 40.33 76.11 39.13 37.90 26 ER7a ExonRegion 0 7.98 16.45 23.42 22.84 18.66 15.36 24.92 28.96 43.99 37.61 26.59 9.16 17.25 58.46 39.63 30.18 34.48 46.90 21.24 24.13 74.61 32.27 28.73 27 E7a_E8a KnownJunction 0 6.22 8.49 15.94 17.31 15.70 16.01 33.48 34.42 51.62 35.03 30.90 11.70 6.17 58.10 40.67 20.59 47.03 41.16 4.61 21.41 71.66 37.78 25.18 28 ER8a ExonRegion 0 21.86 27.74 26.25 24.49 33.79 17.34 29.66 37.31 37.91 33.76 16.65 7.69 16.68 25.94 22.38 21.90 17.07 27.45 19.88 19.80 41.39 17.77 23.43 29 IG29 Intergenic 0 4.30 9.70 4.19 5.88 10.46 3.77 9.83 14.17 17.61 7.29 1.54 2.18 4.09 1.80 4.47 3.41 1.46 4.65 2.18 6.21 4.67 3.04 6.75 30 IG29_SR3 SilentIntergenicRegion 0 1.67 8.13 3.22 4.83 9.83 1.78 11.35 13.55 15.40 5.55 0.84 1.57 5.02 1.42 2.33 2.14 0.95 2.62 1.61 5.29 1.98 3.00 4.44 31 IG29_AR6 ActiveIntergenicRegion 0 7.60 16.09 5.02 8.25 12.06 7.35 8.47 15.39 22.70 9.04 2.62 6.10 3.24 3.38 6.28 4.92 3.99 7.36 2.88 6.88 8.55 2.53 11.21 32 IG29_SR2 SilentIntergenicRegion 0 7.07 14.27 8.07 9.76 15.28 5.70 6.53 15.67 21.55 9.67 2.90 0.05 4.72 2.46 8.93 5.35 1.94 12.61 1.91 4.79 8.71 3.08 11.14 33 IG29_AR2 ActiveIntergenicRegion 0 9.44 9.56 6.93 6.61 8.18 5.91 8.84 16.39 15.77 13.96 2.08 1.15 0.00 0.00 5.58 5.03 0.00 5.24 6.16 5.64 10.98 2.05 7.34 34 IG29_SR1 SilentIntergenicRegion 0 10.18 5.05 6.92 7.93 9.85 9.51 6.25 18.33 18.34 12.70 4.42 2.16 1.61 2.80 14.55 6.21 2.76 10.22 1.93 15.80 12.21 4.08 11.19 35 IG29_AR1 ActiveIntergenicRegion 0 9.95 8.83 2.64 3.67 9.68 5.97 5.75 10.24 23.96 7.42 1.40 2.40 1.70 1.80 6.67 6.45 0.00 3.66 3.46 7.70 5.58 4.52 9.56