Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C16orf48 Gene 0 14.54 13.60 53.50 10.99 13.99 21.90 12.55 27.24 25.23 29.14 34.90 6.04 4.75 48.72 59.12 34.33 29.29 33.88 34.18 32.21 46.74 26.60 22.85 2 243878 Transcript 0 11.49 6.93 42.25 5.17 6.78 16.05 10.19 20.85 14.61 20.81 29.14 5.54 4.26 39.91 31.81 22.71 20.74 32.60 23.79 22.95 38.01 16.72 21.98 3 414445 Transcript 0 7.28 3.44 5.02 4.35 8.91 5.46 4.41 1.26 2.84 4.45 2.15 1.82 0.14 5.18 8.76 6.00 3.04 4.77 10.54 4.30 4.19 6.35 5.52 4 ER1a ExonRegion 0 4.12 2.94 9.29 0.76 1.85 5.64 2.07 4.11 5.81 7.74 15.27 1.20 0.99 15.22 13.63 9.26 16.61 10.03 8.30 8.27 29.67 6.13 8.20 5 E1a_E2a KnownJunction 0 16.00 12.63 29.95 1.93 10.87 7.38 6.05 15.12 18.06 19.02 24.74 5.40 6.17 46.44 24.11 7.26 28.42 19.94 9.22 11.44 57.33 12.37 23.73 6 ER2a ExonRegion 0 4.49 9.22 57.73 5.86 8.05 23.27 11.41 24.39 18.55 26.72 40.78 6.77 0.58 58.39 47.60 34.99 33.14 40.88 27.00 35.65 55.17 21.03 28.96 7 E2_Da NovelBoundary 0 0.00 5.46 7.57 6.63 0.00 2.84 4.06 10.06 1.79 8.14 9.53 0.00 6.82 11.71 6.18 7.69 9.07 11.15 18.82 3.20 0.00 0.00 8.62 8 E2a_E3a KnownJunction 0 14.74 0.00 67.74 11.52 8.66 23.51 20.05 38.36 22.60 24.39 46.12 18.16 6.82 50.21 38.20 31.79 23.56 59.78 42.45 31.32 46.52 22.66 38.50 9 E2a_E4b NovelJunction 0 0.00 0.00 2.78 0.00 0.00 0.00 0.00 2.30 7.23 5.26 6.53 0.00 0.00 7.00 14.09 11.02 4.68 1.99 13.84 0.00 7.54 8.70 4.18 10 E3_Aa NovelBoundary 0 10.52 3.22 5.50 1.70 8.66 7.67 8.74 6.20 9.46 3.95 2.68 0.00 0.00 7.95 16.44 11.54 14.31 0.00 4.71 6.14 5.81 2.33 4.35 11 ER3a ExonRegion 0 16.97 13.78 65.41 9.27 10.47 26.55 17.95 35.35 27.97 40.08 43.28 7.26 15.24 66.67 62.64 54.84 29.42 58.23 48.72 43.18 49.22 28.33 31.13 12 E3_Da NovelBoundary 0 3.78 9.14 9.85 1.56 0.00 8.46 6.05 10.64 8.85 8.52 0.00 0.00 0.00 4.59 10.14 19.99 4.77 3.77 19.67 9.20 8.53 9.00 3.93 13 E3a_E4b KnownJunction 0 16.67 5.85 61.32 5.79 4.24 10.45 11.79 27.36 9.26 25.71 31.85 0.00 0.00 34.32 22.75 18.63 13.18 38.39 26.07 29.72 25.39 26.51 18.95 14 E3a_E5a NovelJunction 0 0.00 6.58 14.72 0.00 0.00 0.00 4.50 1.60 0.00 1.61 4.84 0.00 0.00 2.12 0.00 0.00 0.00 0.00 0.00 6.01 3.03 0.00 0.00 15 I3 Intron 0 11.10 6.81 13.86 4.31 9.85 7.16 9.90 5.46 4.31 5.34 5.18 4.74 1.29 7.79 13.20 9.29 5.16 7.28 9.60 6.41 4.92 3.72 2.29 16 I3_SR1 SilentIntronRegion 0 6.06 4.96 4.85 1.46 3.71 7.05 7.82 3.29 3.25 3.98 2.83 0.00 2.00 7.02 15.41 7.33 3.27 8.00 6.77 5.49 4.62 3.20 5.82 17 I3_AR1 ActiveIntronRegion 0 12.64 7.39 16.57 5.17 11.71 7.24 10.57 6.13 4.65 5.77 5.89 6.15 1.09 8.07 12.63 9.91 5.75 7.11 10.48 6.72 5.03 3.89 1.28 18 E4_Aa NovelBoundary 0 6.52 22.89 24.66 14.45 3.82 8.57 12.90 12.28 11.52 7.36 0.00 0.00 0.00 0.00 13.35 0.00 9.54 2.53 3.95 2.88 2.97 3.12 0.00 19 ER4a ExonRegion 0 7.28 3.44 5.02 4.35 8.91 5.46 4.41 1.26 2.84 4.45 2.15 1.82 0.14 5.18 8.76 6.00 3.04 4.77 10.54 4.30 4.19 6.35 5.52 20 E4_Ab KnownBoundary 0 16.30 2.76 4.32 9.66 4.33 2.27 6.49 4.07 3.30 5.78 4.53 0.00 0.00 4.53 13.35 3.33 8.42 10.36 23.44 18.15 2.90 6.25 7.51 21 ER4b ExonRegion 0 22.98 20.12 54.86 12.09 17.79 35.85 16.00 37.22 34.03 36.88 35.44 8.21 11.59 64.56 70.33 50.26 38.11 56.97 56.09 39.52 49.19 30.10 30.31 22 E4a_E5a KnownJunction 0 51.27 27.96 51.00 21.48 43.04 25.89 16.74 35.82 27.11 35.73 32.22 6.15 6.17 49.68 82.33 72.12 39.93 54.14 47.15 49.60 37.81 28.29 24.16 23 E5_Aa NovelBoundary 0 3.78 5.26 1.36 0.00 3.14 2.90 5.87 8.83 1.65 1.37 0.00 0.00 6.82 2.94 10.75 7.35 4.02 10.32 0.00 2.68 0.00 11.27 4.18 24 ER5a ExonRegion 0 27.24 23.76 66.87 16.56 24.64 35.92 20.29 40.12 36.81 40.17 51.41 5.28 6.01 74.70 76.19 44.46 40.19 46.67 49.68 45.60 58.57 35.25 32.34 25 E5_Da NovelBoundary 0 6.67 9.14 8.10 2.90 12.14 12.44 5.39 8.50 14.32 5.26 4.84 5.85 0.00 12.60 15.95 13.07 4.49 9.16 3.67 10.93 14.33 2.69 6.91 26 E5a_E6a KnownJunction 0 38.75 30.19 70.90 22.41 24.28 32.37 22.48 33.64 39.99 52.00 57.28 6.30 0.00 77.40 88.02 64.51 22.07 43.82 53.65 47.23 59.99 41.64 37.73 27 E6_Aa NovelBoundary 0 11.34 0.00 15.88 0.00 0.00 12.95 3.84 13.80 4.37 4.46 2.42 5.70 0.00 2.12 13.35 12.13 7.76 12.39 0.00 10.10 0.00 0.00 3.16 28 ER6a ExonRegion 0 24.84 23.01 78.75 20.55 29.80 26.52 15.27 36.08 44.08 46.64 63.66 7.84 2.88 64.87 123.97 47.38 38.33 35.17 50.87 44.93 67.72 48.07 33.03 29 E6a_E7a KnownJunction 0 24.97 37.76 111.05 38.66 38.88 24.36 32.64 58.94 62.30 70.03 71.81 0.00 0.00 63.39 97.78 46.83 57.60 27.23 39.53 72.74 68.51 82.54 26.89 30 E7_Aa NovelBoundary 0 0.00 2.89 1.80 1.60 0.00 15.96 1.99 0.00 3.50 0.00 2.42 0.00 0.00 0.00 0.00 7.60 0.00 3.52 0.00 5.31 0.00 0.00 4.35 31 ER7a ExonRegion 0 19.85 20.14 91.93 21.17 21.69 28.73 18.84 45.20 39.95 41.74 40.47 10.50 5.28 61.36 92.06 45.18 37.35 39.29 45.77 46.24 57.98 43.89 26.23 32 ER7b ExonRegion 0 7.41 4.07 4.29 1.02 3.34 15.59 1.99 1.30 0.00 2.01 1.93 0.00 0.00 8.12 13.78 2.23 0.83 0.92 4.78 1.06 2.75 0.00 4.40