Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TAF1C Gene 0 68.14 41.26 121.23 42.79 40.72 57.61 35.84 77.80 93.01 147.65 109.33 28.68 39.66 116.52 111.12 112.72 87.87 107.38 84.87 47.89 109.36 94.91 78.86 2 341690 Transcript 0 24.28 13.29 42.49 16.60 9.45 10.52 5.59 22.44 37.02 56.10 32.71 6.30 23.10 37.30 22.66 52.81 25.06 40.24 18.86 10.44 26.91 53.50 31.58 3 378541 Transcript 0 62.21 19.07 89.91 26.99 32.05 47.42 27.06 67.60 84.38 113.30 117.42 18.84 34.15 90.73 66.68 100.21 76.37 96.60 75.65 46.89 83.74 61.03 77.14 4 ER1a ExonRegion 1 72.88 35.54 40.86 14.49 34.87 71.34 29.76 28.14 44.26 66.33 70.86 4.19 7.82 42.48 63.05 98.67 61.98 75.92 107.51 31.94 62.33 66.85 99.15 5 E1a_E2a KnownJunction 0 13.93 3.35 14.07 4.53 12.56 0.00 1.90 12.98 33.51 54.10 62.17 6.30 0.00 18.89 24.72 28.80 40.30 16.79 21.18 14.96 8.22 2.88 7.60 6 E1a_E2b KnownJunction 0 3.78 9.41 4.91 0.00 0.00 0.00 0.00 1.89 4.08 1.32 12.79 0.00 0.00 4.65 0.00 3.67 0.00 4.10 0.00 2.43 5.37 2.82 4.35 7 I1_AR3 ActiveIntronRegion 0 5.15 0.90 5.29 4.47 9.75 5.02 8.36 9.69 12.24 7.37 7.77 16.04 5.02 17.26 17.33 15.40 20.92 16.69 12.85 6.59 30.05 42.61 29.70 8 I1_SR3 SilentIntronRegion 0 5.03 0.00 1.17 0.06 2.34 0.00 0.44 4.75 2.52 1.58 1.61 7.40 2.93 6.56 2.78 0.00 9.63 12.70 0.53 2.22 10.74 21.79 6.36 9 E2_Aa NovelBoundary 0 20.45 15.59 15.29 8.66 3.74 2.61 8.17 14.91 11.92 20.47 15.27 0.00 27.76 9.12 15.20 24.44 42.92 18.03 9.51 5.62 30.33 59.34 26.97 10 ER2a ExonRegion 1 11.29 10.76 64.42 22.64 11.79 21.92 13.40 62.45 78.87 115.31 117.04 11.33 16.50 72.72 79.21 120.35 86.07 115.12 142.79 56.55 65.77 81.72 99.61 11 E2_Ab KnownBoundary 0 27.19 22.10 90.48 37.92 55.77 101.53 37.01 68.06 76.94 110.89 96.29 6.30 48.37 118.31 88.26 160.30 89.85 134.81 110.97 49.15 112.68 96.63 121.13 12 ER2b ExonRegion 1 13.10 28.77 88.86 36.17 63.72 97.19 46.20 68.63 68.11 116.82 97.81 18.22 65.56 111.35 90.36 116.53 70.76 118.99 80.36 45.08 100.77 93.45 87.00 13 E2a_E3a KnownJunction 0 12.00 43.48 112.00 45.05 82.68 105.51 55.69 72.04 68.00 123.14 75.60 26.86 54.05 136.32 128.56 98.95 85.74 105.04 103.63 40.52 105.58 105.08 82.03 14 ER3a ExonRegion 0 22.79 40.97 92.17 40.29 41.83 72.97 37.26 54.80 73.94 124.06 82.83 18.27 24.08 123.99 105.75 92.72 90.61 109.02 94.90 51.82 94.95 113.91 85.52 15 E3a_E4a KnownJunction 0 72.16 56.77 95.50 60.17 39.30 63.32 23.01 56.64 90.77 120.29 81.65 18.46 26.46 97.65 115.58 122.19 121.08 105.83 55.53 60.02 112.56 88.60 108.92 16 ER4a ExonRegion 1 50.93 29.30 86.95 43.75 28.91 35.05 20.93 53.69 83.26 136.81 82.40 6.58 24.50 118.28 82.74 82.43 87.47 111.79 48.59 57.01 118.03 82.09 70.42 17 E4a_E5a KnownJunction 0 101.13 39.47 132.55 49.94 47.28 36.85 42.79 76.27 89.78 171.49 108.71 12.30 33.44 144.62 123.37 116.72 117.91 168.47 61.84 74.46 168.90 135.33 73.24 18 ER5a ExonRegion 0 72.24 37.10 113.59 31.74 25.93 50.06 31.47 65.99 80.24 140.79 123.66 24.29 31.21 141.21 87.36 103.76 91.58 138.68 88.87 55.04 136.78 99.96 72.31 19 E5a_E6a KnownJunction 1 87.57 14.27 114.57 29.73 47.62 57.58 41.78 61.73 67.04 142.42 92.81 24.91 6.82 133.20 92.47 70.07 48.53 117.81 70.87 49.79 100.70 99.63 46.52 20 E5a_E7a NovelJunction 0 2.89 22.96 4.55 0.00 8.23 0.00 6.58 2.55 10.76 9.08 0.00 0.00 0.00 7.42 9.15 4.36 0.00 6.67 0.00 0.00 8.83 0.00 0.00 21 ER6a ExonRegion 0 81.51 31.63 82.96 34.20 51.38 45.97 27.34 63.42 69.12 164.16 133.24 19.25 25.54 122.01 94.33 94.71 84.17 125.95 80.41 60.32 129.16 94.07 86.51 22 E6a_E7a KnownJunction 0 83.27 42.82 76.08 34.99 23.01 37.54 20.40 71.51 83.39 158.24 78.86 11.55 13.31 69.40 64.53 102.54 56.76 103.34 57.32 61.17 89.27 87.20 118.83 23 E7_Aa NovelBoundary 0 10.45 5.85 22.71 7.76 19.95 2.21 6.36 8.95 7.99 7.17 2.68 11.70 8.12 14.42 4.45 7.69 13.28 9.66 0.00 6.52 6.05 9.37 4.35 24 ER7a ExonRegion 0 56.84 42.08 78.14 33.35 26.48 52.31 32.88 59.55 67.42 134.47 90.22 14.55 24.20 115.01 100.58 95.21 78.59 96.29 57.23 42.53 93.04 93.99 76.27 25 E7_Da NovelBoundary 0 47.56 14.47 47.72 21.31 32.85 43.78 19.03 24.56 31.80 73.09 7.42 0.00 0.00 39.85 53.77 51.52 28.89 51.61 8.94 8.18 21.75 22.35 43.96 26 E7a_E8a KnownJunction 1 57.05 54.40 109.13 59.33 53.90 69.39 31.53 64.94 114.93 146.29 121.14 6.15 19.32 119.25 142.04 103.65 68.82 137.21 90.73 49.54 91.68 114.94 105.85 27 I7 Intron 0 43.78 11.60 36.47 6.52 16.22 27.47 9.44 19.29 19.04 33.52 18.61 6.90 1.38 46.30 38.47 47.70 21.19 22.63 27.26 18.21 21.22 22.29 20.97 28 I7_AR1 ActiveIntronRegion 0 44.40 11.77 36.99 6.61 16.45 27.86 9.58 19.54 19.30 33.98 18.88 6.97 1.40 46.96 39.01 48.38 21.49 22.95 27.65 18.47 21.52 22.59 21.26 29 E8_Aa NovelBoundary 0 67.35 11.64 105.82 33.90 45.25 56.96 9.80 36.19 52.89 96.68 48.33 12.45 20.13 87.47 92.96 41.53 30.20 55.13 56.66 40.08 50.90 45.93 56.43 30 ER8a ExonRegion 0 104.61 62.95 210.24 62.72 73.39 89.65 55.38 129.75 163.33 233.04 153.81 32.79 54.40 167.63 159.47 178.07 143.15 204.94 115.76 68.16 142.66 157.83 128.94 31 E8_Da KnownBoundary 0 84.76 84.13 192.36 59.23 69.52 73.42 71.85 89.25 116.23 150.24 54.65 6.30 19.64 109.37 100.50 140.31 105.19 114.29 104.19 51.01 81.36 78.62 83.40 32 E8a_E8b KnownJunction 0 69.05 30.46 116.50 49.81 28.35 23.51 14.53 59.60 97.48 161.71 80.65 18.91 69.31 97.71 67.99 146.71 67.23 105.71 56.57 28.89 75.37 147.51 86.13 33 ER8b ExonRegion 0 52.54 32.31 151.15 54.72 54.16 53.34 46.69 75.05 109.66 137.15 56.42 14.74 32.06 98.91 87.55 137.21 60.17 97.02 60.04 64.75 73.03 78.62 91.67 34 E8_Ab KnownBoundary 1 73.64 15.06 116.41 47.45 58.83 60.82 47.25 70.28 97.83 132.16 49.91 18.61 18.99 124.61 112.37 164.06 16.36 88.83 42.92 54.97 65.73 90.38 93.64 35 ER8c ExonRegion 0 91.03 59.83 198.94 60.29 75.97 73.52 47.50 91.67 149.63 238.96 172.95 53.25 54.00 166.58 183.27 172.00 118.72 138.69 112.33 70.41 150.04 180.14 124.82 36 E8_Db NovelBoundary 0 6.45 9.08 14.55 7.23 3.99 2.16 4.33 17.25 24.39 34.22 4.53 13.80 6.82 41.44 4.45 22.81 9.07 39.05 12.89 8.56 14.09 7.29 0.00 37 E8b_E9a KnownJunction 0 92.68 64.99 176.63 58.83 61.97 54.29 39.88 87.61 123.90 214.17 163.62 62.27 52.92 124.55 117.56 106.55 146.14 163.74 128.47 58.10 118.12 141.33 130.86 38 ER9a ExonRegion 0 50.27 44.00 92.72 32.44 39.43 55.35 33.19 79.92 91.33 133.07 105.48 36.50 55.37 95.78 81.52 78.31 92.84 100.55 60.48 42.49 100.94 91.10 58.61 39 E9_Da NovelBoundary 0 396.37 32.49 116.82 38.22 61.29 79.50 97.60 89.34 109.66 160.82 132.51 81.48 147.88 192.24 191.36 221.74 156.71 127.51 95.16 40.01 128.93 209.17 139.23 40 E9a_E10a KnownJunction 0 22.89 54.99 52.90 38.16 54.33 42.02 33.92 100.06 84.26 116.93 94.60 13.20 12.01 60.57 22.50 63.57 80.97 107.49 65.51 35.35 56.16 26.51 39.27 41 I9 Intron 0 53.13 15.39 57.48 17.80 19.19 28.50 25.32 37.97 37.40 46.31 57.76 36.73 40.67 99.31 79.01 95.92 60.50 67.72 49.47 15.26 44.76 60.62 64.35 42 I9_AR1 ActiveIntronRegion 0 53.94 15.64 58.35 18.07 19.47 28.93 25.70 38.56 37.98 47.02 58.62 37.28 41.32 100.84 80.27 97.42 61.41 68.79 50.21 15.48 45.46 61.58 65.26 43 E10_Aa NovelBoundary 0 44.23 25.39 76.43 34.43 34.55 43.04 27.69 62.76 43.43 72.12 79.91 42.76 92.53 104.48 55.38 75.28 78.07 57.54 58.35 25.89 100.33 25.35 77.60 44 ER10a ExonRegion 0 45.54 43.02 151.50 57.94 44.92 76.01 39.87 137.28 141.85 219.97 148.29 60.55 78.45 204.91 152.72 176.14 113.13 180.73 141.02 72.15 151.15 139.57 127.61 45 E10a_E11a KnownJunction 0 47.12 38.41 214.69 69.89 38.46 63.60 60.33 150.95 157.06 258.17 168.78 83.28 84.09 218.91 185.06 172.43 187.00 187.41 168.85 92.17 190.89 130.61 123.26 46 ER11a ExonRegion 0 74.78 34.32 205.08 66.44 51.45 85.28 41.40 150.66 158.83 262.47 175.65 59.59 77.78 232.51 168.55 170.69 144.12 181.41 156.86 81.66 175.94 128.01 150.50 47 E11_Da NovelBoundary 0 54.01 15.19 79.98 42.85 35.31 35.26 23.80 29.78 92.94 104.22 76.12 94.83 76.94 123.49 69.10 163.97 90.70 60.65 90.83 42.89 85.31 112.12 108.67 48 E11a_E12a KnownJunction 0 65.49 24.93 133.38 45.15 38.54 63.09 35.73 139.36 102.00 198.94 42.96 36.16 33.76 122.14 155.26 92.37 79.85 147.16 83.01 60.66 49.11 50.27 85.02 49 I11 Intron 1 36.96 21.69 56.57 22.41 24.05 29.21 16.64 27.67 72.08 95.16 74.43 21.03 24.85 59.22 44.77 74.92 52.10 57.58 52.14 22.23 89.68 82.05 60.51 50 I11_AR1 ActiveIntronRegion 1 37.07 21.76 56.73 22.47 24.12 29.29 16.69 27.74 72.29 95.43 74.64 21.09 24.92 59.39 44.89 75.14 52.24 57.74 52.29 22.29 89.93 82.29 60.69 51 E12_Aa NovelBoundary 1 50.38 39.27 95.59 55.24 38.88 39.18 21.07 60.67 114.96 117.95 94.02 55.52 48.54 102.13 40.18 139.37 84.43 117.60 81.13 16.81 149.93 145.80 134.62 52 ER12a ExonRegion 0 72.77 49.49 166.64 39.31 43.35 81.03 39.19 107.55 132.01 212.10 172.67 54.25 68.53 177.53 142.03 147.76 125.02 167.27 111.67 68.30 145.46 123.81 118.09 53 E12a_E13a KnownJunction 0 183.88 37.49 178.41 51.91 70.29 117.09 57.32 164.38 169.70 210.97 255.80 42.76 81.33 164.64 94.69 173.72 137.17 220.41 108.05 75.93 190.71 110.22 147.25 54 E12a_E13b KnownJunction 0 0.00 0.00 6.06 0.00 0.00 8.06 2.25 5.83 9.49 5.26 4.69 0.00 0.00 9.54 0.00 8.03 7.95 10.90 0.00 0.00 0.00 10.16 4.27 55 ER13a ExonRegion 0 111.65 30.50 131.42 27.26 43.48 92.15 43.03 90.74 114.56 162.29 213.10 37.88 75.04 189.21 113.87 141.18 134.51 130.27 121.84 69.15 164.73 92.72 116.73 56 ER13b ExonRegion 0 67.10 23.89 116.39 29.03 27.12 72.35 29.37 69.19 100.30 149.94 137.80 43.23 56.60 159.43 145.97 151.13 120.21 89.05 108.04 46.65 141.22 115.50 95.05 57 E13a_E14a KnownJunction 0 110.39 54.73 181.22 54.54 74.87 73.88 62.67 129.92 163.71 231.50 199.68 26.56 59.25 172.41 179.62 173.89 179.52 135.35 90.26 49.79 185.58 99.20 97.83 58 ER14a ExonRegion 0 75.61 44.33 121.16 45.09 40.70 51.51 36.78 73.45 84.41 131.89 96.10 26.99 36.49 97.36 105.60 97.49 76.12 86.72 68.73 39.00 101.43 80.86 57.45 59 ER14b ExonRegion 0 0.00 0.00 0.00 0.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00