Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MON1B Gene 0 79.91 64.70 66.42 44.22 77.53 49.23 54.21 65.36 54.32 113.48 142.58 101.65 149.62 155.43 138.88 159.31 127.01 61.54 68.98 68.09 62.41 82.94 67.92 2 248248 Transcript 0 39.52 24.98 41.86 22.32 33.20 26.73 29.02 37.43 39.06 79.40 116.17 71.73 82.36 125.45 100.55 119.83 89.66 41.30 47.15 54.93 52.83 56.16 36.00 3 320859 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 439557 Transcript 0 0.00 0.00 0.00 1.63 0.00 0.00 0.00 0.00 7.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.33 0.00 5 IG28_SR1 SilentIntergenicRegion 0 0.00 6.07 14.98 13.33 21.84 62.25 30.77 25.88 4.30 32.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.16 5.02 1.54 0.00 1.60 2.37 6 IG28_SR2 SilentIntergenicRegion 0 3.38 8.52 29.34 24.70 25.42 64.98 33.55 35.67 4.86 35.31 0.00 0.00 0.00 0.00 0.00 0.00 0.40 4.21 13.39 1.69 0.00 2.37 2.22 7 IG28_AR2 ActiveIntergenicRegion 0 1.29 5.86 33.13 20.66 22.09 34.51 25.26 36.39 5.13 23.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.18 6.24 1.37 0.00 0.20 1.57 8 ER1a ExonRegion 0 0.00 0.79 0.00 0.00 0.00 8.76 1.99 0.77 1.17 2.17 3.54 0.00 0.00 1.17 8.22 1.98 4.40 6.98 5.84 9.34 0.86 5.67 4.89 9 ER1b ExonRegion 1 11.11 8.25 8.17 3.10 10.24 17.73 13.04 9.80 10.22 20.39 63.43 7.08 14.81 33.49 51.47 104.21 61.22 42.85 49.12 17.00 31.00 36.24 67.15 10 E1_Da NovelBoundary 0 35.41 15.33 6.89 3.96 42.02 35.43 26.94 13.97 24.07 55.44 39.17 0.00 6.49 42.09 8.90 91.00 31.88 38.63 117.65 33.75 5.81 49.91 47.04 11 E1a_E2a KnownJunction 1 28.38 31.24 25.96 23.01 57.22 52.30 41.51 27.68 58.94 115.43 198.37 25.96 39.93 154.51 140.43 516.10 226.18 195.70 261.47 78.49 110.46 84.50 272.14 12 I1 Intron 1 4.48 2.39 3.00 0.00 7.55 2.59 5.60 7.26 11.25 21.69 37.71 5.03 19.32 25.49 24.07 27.90 38.70 9.29 23.21 11.00 6.18 15.18 17.25 13 I1_AR1 ActiveIntronRegion 1 4.52 2.40 3.03 0.00 7.62 2.61 5.65 7.32 11.35 21.89 38.06 5.07 19.50 25.72 24.29 28.16 39.04 9.38 23.39 11.10 6.24 15.32 17.41 14 E2_Aa NovelBoundary 0 6.74 3.09 10.05 3.46 8.15 20.78 11.75 15.44 17.19 29.52 37.43 6.30 26.78 50.97 44.87 47.85 69.47 19.11 33.04 18.09 5.87 19.78 38.41 15 ER2a ExonRegion 1 11.41 11.39 24.83 11.24 14.12 34.83 27.32 25.06 34.66 83.48 168.92 32.14 48.30 116.20 98.61 156.73 179.10 64.88 86.33 45.46 94.02 45.44 79.59 16 E2a_E3a KnownJunction 1 45.19 0.00 32.88 24.34 22.33 18.97 7.07 50.48 58.13 137.77 250.17 51.62 119.64 195.42 302.12 515.33 250.40 130.74 266.55 110.32 138.20 124.73 240.04 17 E2a_E4a KnownJunction 0 0.00 0.00 0.00 1.63 0.00 0.00 0.00 0.00 7.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.33 0.00 18 E3_Aa NovelBoundary 0 24.15 0.00 3.67 0.00 6.62 4.66 12.76 11.17 12.09 9.43 15.58 0.00 20.29 5.24 8.90 15.21 18.05 8.54 27.01 5.24 0.00 5.39 11.61 19 ER3a ExonRegion 1 16.04 9.71 26.51 16.56 30.94 24.13 17.80 36.75 42.25 103.96 171.48 48.92 82.11 184.37 160.93 211.87 165.46 79.01 98.04 70.51 92.09 64.21 89.80 20 E3_Da KnownBoundary 0 16.89 14.87 24.57 23.21 19.35 21.29 28.00 40.79 48.70 106.51 163.20 55.67 59.41 146.10 147.85 122.36 152.88 78.84 81.60 64.94 97.55 56.40 53.95 21 E3a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER3b ExonRegion 1 18.73 11.17 41.06 15.52 9.38 24.93 19.13 34.55 48.83 105.43 162.36 47.77 61.32 193.59 126.94 147.38 161.07 57.25 60.57 75.90 85.39 69.18 58.01 23 E3_Db NovelBoundary 0 29.93 0.00 8.78 7.23 16.81 5.05 8.17 12.28 18.20 19.26 29.43 18.31 12.50 54.15 50.19 30.25 34.97 47.88 13.27 23.59 17.85 10.41 28.26 24 E3b_E4a KnownJunction 0 30.75 6.18 50.80 14.68 11.54 13.63 24.95 36.35 46.96 94.02 181.57 107.44 83.60 176.47 140.92 194.22 93.88 55.46 56.19 67.75 78.64 60.68 22.88 25 I3 Intron 1 9.69 4.65 13.54 5.58 13.72 10.07 8.00 12.50 13.65 21.28 38.40 11.05 8.71 38.54 22.02 48.44 43.52 45.43 37.04 25.32 23.80 26.90 31.73 26 I3_AR1 ActiveIntronRegion 1 9.72 4.67 13.59 5.60 13.77 10.10 8.03 12.54 13.70 21.36 38.54 11.09 8.75 38.67 22.09 48.60 43.68 45.59 37.17 25.41 23.89 27.00 31.84 27 E4_Aa NovelBoundary 1 20.52 22.36 13.75 3.40 20.80 22.20 8.26 26.78 16.75 24.77 43.75 13.50 66.55 72.64 42.77 91.86 61.15 42.16 4.80 38.73 20.32 39.31 16.48 28 ER4a ExonRegion 0 25.95 17.88 46.39 19.16 15.57 31.71 23.21 44.04 49.22 112.26 183.51 56.64 104.04 208.39 160.33 191.69 173.44 96.86 60.51 78.28 94.28 69.03 76.53 29 E4a_E5a KnownJunction 0 37.71 23.75 61.26 19.68 57.72 45.66 33.74 43.58 28.88 124.83 212.16 102.93 212.16 267.12 180.60 210.63 198.04 113.13 68.14 89.80 87.91 60.74 68.63 30 ER5a ExonRegion 0 15.63 13.31 47.51 16.63 18.73 21.67 17.36 36.18 28.16 103.40 107.67 52.54 157.97 185.04 126.80 99.57 121.91 45.56 27.65 56.33 56.04 32.96 23.76 31 E5_Ab KnownBoundary 0 15.48 10.33 72.97 28.90 10.78 11.92 2.25 49.12 47.95 145.32 43.75 33.01 72.88 84.76 75.53 46.40 56.94 35.86 21.74 43.46 47.20 18.61 13.57 32 ER5b ExonRegion 0 19.28 13.39 70.46 33.82 11.68 26.75 29.85 67.66 63.79 142.38 175.49 78.93 112.50 219.26 209.17 219.10 131.47 81.01 64.64 94.21 82.29 82.30 86.85 33 E5_Da NovelBoundary 1 35.86 35.32 76.49 43.15 32.68 42.48 44.74 77.18 60.47 163.67 289.92 64.52 108.11 276.47 278.14 267.02 219.73 113.46 70.78 128.35 126.21 82.48 82.97 34 E5b_E6a KnownJunction 1 80.98 19.34 94.62 40.92 21.56 32.77 50.39 72.37 84.08 213.98 362.25 103.98 99.83 252.16 191.61 239.17 296.03 144.38 76.43 125.98 127.14 130.98 112.94 35 ER5c ExonRegion 1 54.16 19.60 78.87 41.07 22.74 38.09 38.76 73.07 72.87 189.66 352.58 56.28 109.36 267.61 236.98 263.98 273.22 144.88 72.68 119.34 136.03 111.18 105.32 36 ER6a ExonRegion 0 85.17 107.88 96.77 40.25 58.71 51.11 57.68 76.20 65.09 154.04 242.14 92.21 151.93 264.73 220.36 257.86 217.58 105.81 99.12 87.26 100.67 109.77 103.95 37 E6_Da KnownBoundary 0 228.63 295.34 213.06 98.26 231.75 90.52 182.79 120.43 100.23 220.32 271.38 218.32 229.04 450.53 401.63 410.66 313.70 114.12 211.68 149.82 91.62 202.56 147.85 38 ER6b ExonRegion 0 108.60 81.79 75.60 59.08 111.85 59.61 69.99 78.07 59.27 115.98 117.21 131.72 184.51 130.57 126.10 135.72 99.31 45.49 65.99 66.75 46.42 89.12 58.23