Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CENPT Gene 0 211.55 84.90 305.07 118.21 90.98 128.13 79.17 153.03 157.54 100.49 130.79 39.58 27.96 146.66 167.09 141.29 116.29 207.65 94.87 129.12 190.85 103.51 102.19 2 440851 Transcript 0 26.70 0.72 3.38 1.12 3.90 1.90 3.02 8.91 15.75 4.08 1.15 2.72 0.54 2.35 2.50 2.00 0.89 3.10 1.17 1.94 4.49 1.27 3.32 3 445712 Transcript 0 84.66 24.19 64.98 23.92 21.05 59.41 25.64 37.66 35.14 20.07 39.52 12.76 10.00 57.27 57.11 48.18 33.70 70.31 36.13 38.41 58.92 30.49 42.66 4 436104 Transcript 0 89.13 7.43 100.00 50.61 16.13 12.95 20.14 57.63 103.27 39.81 35.80 11.25 0.00 8.89 18.30 16.15 28.33 114.95 17.32 33.88 70.06 41.46 19.38 5 219172 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ER1a ExonRegion 0 16.30 0.62 2.00 0.71 2.45 1.68 1.86 5.26 12.47 1.77 1.18 0.39 1.18 1.63 2.64 1.82 0.00 0.35 0.00 1.99 5.00 1.88 2.69 7 E1a_E2a KnownJunction 0 24.00 0.00 4.08 0.00 0.00 0.00 2.25 14.46 18.95 3.06 0.00 6.30 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 3.15 0.00 0.00 8 ER2a ExonRegion 0 39.81 1.54 4.05 2.66 9.25 4.02 4.94 7.01 15.82 7.41 2.27 1.46 0.43 5.41 4.85 4.18 2.66 6.38 3.50 3.82 5.31 1.92 7.28 9 E2_Ab KnownBoundary 0 386.66 26.57 28.27 25.57 50.93 64.45 77.37 20.37 22.95 17.35 16.21 0.00 7.95 48.50 45.61 26.66 34.50 53.52 26.92 23.78 41.64 16.10 32.27 10 ER2b ExonRegion 1 346.60 85.42 116.02 55.40 82.80 165.85 94.65 55.86 80.02 36.60 87.05 4.27 5.08 70.78 97.61 111.78 63.26 196.00 66.85 88.55 118.55 52.09 104.59 11 E2a_E3a KnownJunction 1 20.08 11.45 101.50 25.20 7.39 13.40 10.02 59.23 61.26 33.79 62.91 0.00 0.00 39.67 32.39 7.78 74.89 31.84 4.80 31.06 98.72 16.10 11.27 12 ER3a ExonRegion 1 23.65 18.17 223.42 76.13 10.82 29.38 9.52 114.91 110.01 73.59 153.63 10.13 22.32 139.03 157.88 119.11 122.93 206.48 69.80 136.68 223.57 77.66 95.20 13 E3_Da NovelBoundary 1 7.11 6.18 68.45 38.36 7.47 7.89 6.14 45.30 49.04 1.29 19.85 0.00 6.82 29.43 69.23 66.22 13.28 91.07 66.45 31.64 29.34 43.29 43.79 14 E3a_E4a KnownJunction 1 44.82 41.51 347.56 165.18 19.69 69.22 19.96 169.55 167.76 87.33 96.34 25.81 13.80 186.71 377.53 267.11 39.93 473.27 173.93 144.32 75.86 191.48 225.27 15 E3a_E5a NovelJunction 0 3.19 0.00 14.69 3.06 0.00 4.88 0.00 6.53 4.11 4.51 0.00 0.00 0.00 7.30 0.00 4.02 0.00 29.80 8.75 19.18 5.25 0.00 8.37 16 E4_Aa NovelBoundary 1 12.45 21.38 118.89 37.19 20.37 69.96 25.48 52.49 51.33 28.47 40.43 11.40 18.83 33.26 23.86 63.32 13.37 98.58 26.45 37.84 83.40 36.62 35.77 17 ER4a ExonRegion 0 92.98 71.13 404.64 136.01 78.81 136.58 73.92 203.47 206.92 133.94 184.00 29.62 33.58 174.11 216.47 188.26 103.30 408.79 145.01 170.31 230.36 131.43 160.98 18 E4a_E5a KnownJunction 0 138.84 69.13 388.48 112.74 221.05 280.35 142.91 167.17 191.09 134.26 166.94 37.81 37.66 158.10 137.34 115.10 116.78 199.31 42.64 114.48 269.04 66.07 66.67 19 ER5a ExonRegion 0 171.50 61.51 468.91 139.44 89.27 210.64 110.49 182.90 194.24 128.94 140.56 46.82 44.92 150.41 165.04 103.84 110.36 152.81 69.98 123.12 194.29 100.91 86.07 20 E5a_E6a KnownJunction 0 1109.53 217.26 643.56 214.23 85.99 174.05 88.68 297.17 309.40 205.47 261.28 85.98 107.95 203.54 313.12 235.58 173.45 340.54 285.94 190.41 330.32 311.25 169.02 21 ER6a ExonRegion 0 264.52 76.44 420.63 138.89 65.72 119.48 74.99 188.29 183.75 120.17 167.47 36.03 38.44 191.80 205.71 142.12 152.95 226.48 111.70 146.84 244.21 141.25 116.72 22 E6a_E7a KnownJunction 0 207.00 99.13 416.37 158.29 132.85 145.09 98.31 197.36 182.38 116.15 151.56 19.06 12.34 225.38 177.02 198.49 123.80 260.49 137.60 119.46 236.55 177.21 140.68 23 ER7a ExonRegion 0 207.08 90.14 455.54 173.20 115.85 154.29 98.30 234.28 202.73 115.28 140.11 34.64 34.22 242.56 207.01 196.56 135.52 319.51 183.29 150.20 236.69 169.72 153.98 24 E7a_E8a KnownJunction 0 300.87 108.99 420.06 149.10 137.44 186.88 116.72 204.30 175.95 90.63 131.56 48.62 31.49 240.22 247.73 207.38 123.14 256.43 248.10 167.21 198.80 160.43 162.96 25 E8_Aa NovelBoundary 0 63.94 38.74 207.77 79.74 53.31 83.30 39.61 93.98 87.82 53.59 50.38 6.00 12.66 69.28 56.74 57.08 40.77 115.24 71.91 57.40 61.34 43.35 50.79 26 ER8a ExonRegion 0 141.95 111.49 355.21 126.31 94.31 125.43 90.01 168.31 172.58 107.30 141.24 36.66 26.27 183.03 159.08 136.82 118.14 215.97 105.50 143.19 212.02 104.22 102.29 27 E8_Da NovelBoundary 0 39.78 50.98 75.46 43.18 28.01 45.60 40.67 59.60 56.51 37.58 53.91 17.56 19.48 81.29 53.53 53.06 41.51 113.04 54.87 65.64 64.80 32.03 59.16 28 E8a_E9a KnownJunction 0 181.37 117.15 350.90 148.67 83.19 99.66 96.85 130.62 156.97 91.38 83.02 12.15 6.33 127.79 119.54 130.91 108.74 213.82 74.73 97.09 166.86 80.89 126.08 29 I8 Intron 0 47.26 25.81 78.61 31.06 36.42 57.49 37.35 48.05 53.90 35.55 41.83 18.74 10.29 53.98 38.66 37.04 36.10 86.95 24.84 43.60 57.28 26.13 28.07 30 I8_AR1 ActiveIntronRegion 0 47.40 25.89 78.84 31.15 36.53 57.66 37.46 48.20 54.06 35.65 41.95 18.80 10.33 54.15 38.78 37.15 36.21 87.21 24.92 43.73 57.45 26.21 28.15 31 E9_Aa NovelBoundary 0 86.31 29.47 129.80 51.54 29.54 41.34 65.27 42.43 72.40 44.40 32.85 5.85 6.17 61.10 89.00 48.36 45.82 149.73 26.54 61.87 73.39 20.64 42.94 32 ER9a ExonRegion 0 213.69 121.20 336.51 131.76 115.63 144.25 112.78 146.52 159.02 90.17 127.02 32.51 20.32 176.51 201.03 151.45 102.87 232.41 109.20 152.17 233.36 106.22 113.40 33 E9_Da KnownBoundary 0 343.54 94.92 245.32 125.63 97.54 201.53 98.17 149.88 134.37 73.68 105.92 26.56 40.91 132.14 114.84 127.74 102.01 229.03 88.57 112.69 153.33 81.56 140.08 34 E9a_E10a KnownJunction 1 52.60 42.89 134.94 30.83 57.72 49.97 28.97 53.85 39.84 39.30 78.02 0.00 0.00 79.82 99.26 48.19 50.86 77.68 39.44 40.52 56.71 41.15 38.50 35 ER9b ExonRegion 0 84.66 24.19 64.98 23.92 21.05 59.41 25.64 37.66 35.14 20.07 39.52 12.76 10.00 57.27 57.11 48.18 33.70 70.31 36.13 38.41 58.92 30.49 42.66 36 E9_Db NovelBoundary 0 371.47 117.28 353.77 245.46 153.23 167.46 153.60 208.62 195.72 116.34 112.13 43.21 19.80 183.06 164.78 156.88 87.52 296.23 162.83 192.97 169.08 165.51 147.08 37 I9 Intron 1 241.74 86.76 238.69 108.31 116.25 123.74 84.21 125.37 117.07 74.57 94.08 22.77 13.37 110.77 137.94 111.23 83.84 152.46 97.60 118.83 124.77 89.29 93.40 38 I9_AR1 ActiveIntronRegion 1 243.56 87.37 240.48 109.13 117.11 124.68 84.85 126.30 117.94 75.14 94.79 22.94 13.46 111.59 138.94 112.09 84.46 153.61 98.27 119.72 125.67 89.97 94.09 39 E10_Aa NovelBoundary 0 254.19 103.34 477.30 188.39 127.67 218.91 87.97 166.10 178.38 131.35 96.55 24.01 20.45 171.88 173.68 140.73 92.10 191.47 89.98 187.34 177.05 95.28 95.86 40 ER10a ExonRegion 0 292.89 121.20 506.29 186.66 163.34 212.32 129.89 238.06 236.51 156.82 203.31 65.52 38.33 214.91 250.21 218.50 189.47 305.76 147.73 225.64 275.55 146.77 145.16 41 E10a_E11a KnownJunction 0 438.08 158.59 509.83 168.91 166.64 208.86 118.89 239.30 241.09 171.92 191.68 74.12 21.26 179.82 209.41 197.13 289.48 260.33 202.26 168.04 320.44 187.01 111.06 42 ER11a ExonRegion 0 505.13 139.30 408.73 159.39 144.29 180.55 108.40 259.14 246.85 166.48 157.02 105.80 58.43 230.57 287.47 237.20 182.85 276.61 149.03 201.13 290.66 178.65 159.95 43 E11_Da NovelBoundary 0 9.85 19.21 54.14 20.34 7.39 21.35 37.41 12.53 11.34 10.21 14.16 6.15 0.00 21.72 13.97 20.34 8.23 35.24 16.09 9.14 0.00 4.84 11.61 44 E11a_E12a KnownJunction 0 527.35 173.26 398.66 155.23 143.80 146.39 114.78 240.78 198.20 152.55 113.61 55.97 50.48 209.67 260.21 150.73 137.73 178.37 110.69 157.68 251.19 153.63 128.22 45 I11_SR2 SilentIntronRegion 0 46.12 17.18 40.60 20.81 12.74 27.56 12.43 16.10 21.02 15.05 11.71 2.71 0.00 11.95 18.36 16.99 7.24 18.67 16.59 15.88 15.23 6.78 7.54 46 I11_AR1 ActiveIntronRegion 0 27.51 9.76 45.22 26.71 10.70 29.71 22.11 16.07 17.66 19.27 17.20 0.00 0.00 11.37 19.44 7.73 7.59 22.17 14.33 19.79 9.70 8.33 11.75 47 E12_Aa NovelBoundary 0 71.42 24.86 39.24 14.28 14.35 27.31 34.62 26.49 15.94 10.40 12.58 0.00 0.00 11.95 18.30 6.75 3.65 15.30 3.95 12.02 19.65 5.82 4.18 48 ER12a ExonRegion 0 363.92 174.77 426.55 195.86 168.27 227.01 132.58 248.63 240.88 162.32 179.15 69.66 46.58 228.46 238.31 192.89 162.23 259.02 122.65 167.33 275.40 164.55 138.90 49 E12a_E13a KnownJunction 0 262.86 131.88 493.21 248.19 325.30 227.20 227.26 360.63 320.86 194.64 235.43 101.88 77.59 279.01 274.80 228.06 224.22 433.73 193.42 203.64 283.81 206.97 151.26 50 ER13a ExonRegion 0 147.67 96.09 499.88 240.23 157.84 148.11 110.60 282.08 299.58 186.08 235.41 76.65 71.69 235.77 263.34 276.11 233.06 384.05 168.89 204.72 300.75 175.02 165.10 51 E13_Da NovelBoundary 0 49.19 54.46 337.13 153.09 61.55 45.83 46.42 127.41 157.96 118.46 100.08 35.11 48.86 123.61 169.97 151.93 113.88 209.63 67.48 150.97 144.13 92.10 116.61 52 E13a_E14b KnownJunction 0 89.13 7.43 100.00 50.61 16.13 12.95 20.14 57.63 103.27 39.81 35.80 11.25 0.00 8.89 18.30 16.15 28.33 114.95 17.32 33.88 70.06 41.46 19.38 53 E13b_E14a KnownJunction 1 82.68 72.68 470.33 194.28 63.07 60.65 45.09 229.44 220.37 149.22 113.40 50.12 0.00 151.33 210.03 150.90 128.38 255.02 88.94 126.81 194.72 181.86 98.34 54 ER13b ExonRegion 0 64.70 68.71 396.76 180.58 55.62 52.66 45.01 183.34 205.38 145.82 127.16 51.64 31.49 173.66 251.58 164.32 154.91 240.74 78.04 141.64 197.07 144.51 96.07 55 ER14a ExonRegion 0 78.47 50.56 296.86 132.05 36.47 52.22 35.71 156.84 187.28 121.08 168.28 66.67 25.83 144.30 215.23 132.60 168.19 166.27 67.43 103.83 236.03 143.54 81.37 56 E14_Ab KnownBoundary 1 167.36 36.24 269.42 122.79 61.46 48.21 50.21 154.68 253.06 128.70 115.87 30.91 12.99 72.64 154.15 52.29 148.29 183.51 51.77 115.63 233.46 131.28 50.53 57 ER14b ExonRegion 1 310.88 71.90 249.21 114.57 51.07 92.00 60.36 127.09 174.51 97.86 151.52 59.66 10.41 90.68 151.60 135.01 138.02 185.87 111.33 135.88 213.09 133.45 68.54 58 E14_Da KnownBoundary 0 180.11 63.21 304.66 130.52 61.80 31.06 30.56 149.88 151.71 109.01 98.97 60.92 19.64 114.60 116.69 86.81 70.97 178.83 72.76 103.42 109.10 95.40 49.17 59 ER14c ExonRegion 0 368.03 120.40 178.86 77.00 93.17 114.28 56.09 105.94 89.24 73.16 95.04 31.74 27.34 112.39 145.45 167.73 87.35 196.12 85.40 63.67 124.18 72.73 113.14