Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 EDC4 Gene 0 73.04 65.29 223.28 88.45 72.73 95.53 85.67 137.56 139.29 116.45 263.56 75.22 73.71 263.49 293.69 262.16 208.85 250.01 136.06 139.34 181.43 98.70 97.54 2 358933 Transcript 0 84.53 76.44 237.31 97.65 82.88 105.85 101.38 148.24 154.91 127.08 292.61 91.66 91.19 293.93 307.33 295.84 230.01 280.07 163.06 156.41 196.53 106.91 110.93 3 ER1a ExonRegion 1 9.01 8.76 22.24 7.36 13.18 24.01 16.07 25.25 28.33 28.24 82.33 7.07 14.73 83.64 94.18 70.61 92.95 46.87 49.02 43.04 67.20 27.33 27.47 4 E1a_E2a KnownJunction 0 10.52 8.81 37.40 23.87 12.31 14.88 19.34 56.76 62.07 50.66 77.55 12.60 59.25 117.49 128.56 251.64 106.22 221.53 85.84 58.55 92.11 31.72 91.51 5 ER2a ExonRegion 0 29.21 23.72 67.50 27.80 63.21 124.52 78.11 79.27 97.37 85.32 218.81 49.72 37.73 214.63 186.16 195.65 174.53 222.01 107.94 123.39 176.66 78.15 58.75 6 E2a_E3a KnownJunction 0 52.08 56.11 90.71 33.56 65.79 103.92 71.85 88.47 157.35 97.56 253.49 42.76 69.15 271.18 277.52 193.97 247.41 193.55 158.22 185.87 191.51 133.73 82.20 7 ER3a ExonRegion 0 56.99 50.22 101.59 48.42 49.36 96.36 62.69 118.28 174.77 139.58 313.85 102.75 84.29 286.89 258.47 288.83 269.58 237.93 142.74 182.92 240.13 116.44 111.49 8 E3a_E4a KnownJunction 0 53.71 50.12 125.16 60.53 32.60 103.80 70.13 157.60 213.57 123.38 373.25 136.99 77.75 316.21 340.57 401.95 309.86 359.69 191.82 209.90 247.54 133.12 162.53 9 ER4a ExonRegion 0 52.02 37.19 145.30 66.29 69.09 91.63 82.62 142.82 201.20 131.22 373.22 137.16 112.42 376.50 292.74 345.03 319.30 362.68 189.15 213.57 272.58 139.93 151.38 10 E4a_E5a KnownJunction 0 58.01 19.14 138.94 89.07 68.34 111.30 86.60 110.16 198.58 138.23 263.65 129.19 87.17 377.07 302.86 328.55 226.93 312.19 136.47 193.73 226.72 108.63 163.64 11 ER5a ExonRegion 0 35.43 45.41 146.54 76.86 72.16 91.00 78.76 124.90 154.26 128.81 305.91 123.05 105.92 300.09 314.72 296.51 268.85 281.62 141.15 173.90 225.83 126.32 127.48 12 E5a_E6a KnownJunction 0 64.97 93.93 177.43 82.54 102.04 105.00 141.14 147.41 151.97 118.43 376.73 68.87 88.31 393.08 294.21 263.52 269.38 242.59 159.53 211.18 214.24 84.81 171.49 13 E6_Aa NovelBoundary 0 25.63 3.35 5.82 5.49 14.43 0.00 6.58 8.30 8.56 0.00 24.06 35.41 5.68 23.54 26.21 15.55 21.32 14.92 3.76 21.22 15.26 19.04 16.39 14 ER6a ExonRegion 0 51.98 66.82 135.70 68.60 89.66 108.65 103.69 118.98 145.23 116.23 350.55 76.67 92.53 342.54 303.14 341.53 282.58 358.33 181.07 171.45 209.69 101.98 123.04 15 E6a_E7a KnownJunction 0 55.19 71.57 126.84 52.44 88.12 87.73 78.04 111.76 149.62 103.93 349.77 126.34 61.68 313.44 310.28 210.12 244.13 302.65 193.70 155.83 184.22 108.32 77.00 16 ER7a ExonRegion 0 47.57 63.84 141.47 57.53 63.53 85.68 77.36 123.23 149.01 113.29 327.73 60.82 76.20 322.49 275.12 263.61 258.85 276.51 184.63 174.47 205.30 119.81 112.49 17 E7_Da NovelBoundary 0 42.97 3.35 50.94 45.88 24.62 16.58 28.62 25.10 36.08 16.52 94.76 21.61 19.15 57.74 66.38 73.83 38.34 92.81 39.72 15.21 63.51 45.74 57.02 18 E7a_E8a KnownJunction 0 58.08 70.12 167.65 64.66 89.98 106.36 123.74 102.97 148.81 117.74 349.56 108.64 72.56 319.03 254.90 288.90 264.61 279.11 254.50 212.97 205.16 122.28 88.09 19 I7 Intron 0 38.12 6.81 34.92 19.10 17.06 14.91 14.56 17.65 29.33 15.25 60.69 15.50 20.97 46.99 53.61 51.63 33.13 47.27 31.98 15.60 40.02 29.56 41.65 20 I7_AR1 ActiveIntronRegion 0 38.36 6.84 35.14 19.21 17.17 15.00 14.65 17.76 29.52 15.34 61.07 15.60 21.11 47.29 53.95 51.93 33.33 47.57 32.18 15.70 40.28 29.73 41.89 21 E8_Aa NovelBoundary 0 41.27 15.52 44.76 32.53 39.56 34.30 41.60 56.85 48.18 17.30 61.86 19.21 19.15 72.93 76.02 34.44 48.81 59.32 39.15 26.21 62.15 42.80 58.56 22 ER8a ExonRegion 0 59.47 56.64 166.09 71.22 79.32 87.64 107.64 159.49 173.94 137.37 340.45 125.48 109.66 326.99 304.18 355.71 251.68 335.28 207.69 173.89 214.30 135.20 107.35 23 E8a_E9a KnownJunction 0 88.53 96.89 242.36 97.69 102.97 95.34 162.08 203.44 223.87 209.74 432.90 157.40 119.15 437.46 410.29 556.01 302.29 411.76 366.13 200.19 205.41 143.47 183.02 24 ER9a ExonRegion 0 64.45 71.66 199.22 98.66 90.18 127.25 124.23 177.13 207.25 182.66 464.63 149.16 142.88 367.79 381.89 363.84 355.36 324.94 281.45 213.15 288.92 159.74 162.07 25 E9a_E10a KnownJunction 0 92.09 85.84 179.21 91.66 82.77 106.36 95.83 142.40 174.07 171.08 408.21 172.26 328.23 447.53 357.25 343.07 352.97 278.61 259.58 195.91 274.29 193.25 165.78 26 ER10a ExonRegion 0 89.40 84.99 236.18 103.58 83.34 134.27 138.67 197.19 225.04 203.66 436.15 221.43 220.24 401.41 446.61 521.33 311.69 376.48 290.37 211.24 275.74 205.01 187.21 27 E10a_E11a KnownJunction 0 193.00 137.41 264.42 133.08 102.38 163.94 197.41 211.53 260.04 204.12 513.50 272.19 146.42 389.19 488.41 669.91 315.47 495.53 537.33 206.20 264.96 246.22 235.77 28 ER11a ExonRegion 0 105.81 87.40 195.39 86.70 92.07 124.48 133.99 183.70 207.36 169.02 439.39 199.91 166.52 366.50 328.01 381.56 341.02 328.63 213.26 191.80 257.00 151.33 149.57 29 E11a_E12a KnownJunction 0 119.95 103.40 202.48 95.26 65.03 138.73 173.56 196.83 186.57 150.94 368.88 291.24 188.79 386.08 356.76 329.06 233.66 324.25 209.70 242.44 200.53 132.63 114.64 30 ER12a ExonRegion 0 73.97 73.83 215.16 78.63 61.11 97.22 112.81 158.11 174.76 139.23 327.24 155.24 158.30 338.51 369.18 337.84 240.22 306.02 167.15 175.13 229.05 137.51 132.02 31 E12a_E13a KnownJunction 0 68.68 83.27 234.02 124.59 99.75 129.47 166.36 179.99 145.14 136.03 339.30 94.68 118.82 293.31 275.91 304.71 207.29 325.82 116.05 162.99 281.77 85.11 108.33 32 ER13a ExonRegion 0 51.52 71.06 242.46 89.18 69.57 127.74 132.02 140.81 156.17 115.60 292.82 92.64 105.04 336.13 298.75 300.14 205.70 358.16 151.06 157.94 209.84 98.30 117.43 33 E13a_E14a KnownJunction 0 71.35 94.52 303.33 93.23 95.59 139.29 119.50 153.99 176.85 147.20 268.54 121.99 140.41 432.87 332.78 330.68 247.69 487.62 212.05 193.61 208.62 103.73 157.24 34 ER14a ExonRegion 0 75.21 69.43 293.68 110.20 68.35 104.53 91.18 168.30 157.92 152.33 344.10 110.73 139.58 340.01 412.10 353.00 223.53 423.74 211.48 159.30 234.96 136.81 129.53 35 E14a_E15a KnownJunction 0 68.53 74.53 261.79 105.58 83.11 99.37 89.03 157.64 151.68 147.82 391.10 117.04 119.96 344.46 315.60 237.89 268.82 350.90 133.84 163.18 235.68 114.63 95.95 36 ER15a ExonRegion 0 66.41 60.49 221.35 79.34 54.34 96.12 85.09 129.34 136.35 133.42 276.94 91.31 108.72 315.35 320.16 278.76 229.99 289.53 144.26 138.58 192.98 89.40 99.25 37 E15a_E16a KnownJunction 0 39.56 36.84 135.51 39.99 53.23 70.19 51.18 74.80 85.71 75.67 199.84 59.12 116.55 211.20 269.24 228.15 178.77 166.23 78.50 131.54 134.18 41.39 101.75 38 ER16a ExonRegion 0 25.90 30.74 119.88 44.09 21.30 46.64 33.52 68.06 71.72 67.37 176.02 44.18 52.17 165.11 203.87 173.28 154.38 155.42 67.70 90.27 99.85 50.67 47.20 39 E16a_E17a KnownJunction 0 73.42 100.71 238.67 101.19 50.34 75.07 56.09 128.64 137.82 123.97 258.59 75.02 134.73 310.03 297.18 395.20 286.77 340.46 144.95 181.84 158.71 103.79 72.90 40 ER17a ExonRegion 0 36.82 41.33 196.78 65.02 36.70 77.36 64.73 111.97 115.38 110.91 259.32 56.76 76.84 258.01 310.94 241.49 201.42 221.51 117.53 119.98 160.76 84.75 77.31 41 E17_Da NovelBoundary 0 9.85 0.00 98.07 26.34 39.30 21.98 37.54 21.15 27.17 18.24 31.96 18.31 6.82 23.37 60.45 15.64 44.13 82.70 51.30 49.28 16.62 21.68 12.89 42 E17a_E18a KnownJunction 0 35.19 31.77 160.55 42.25 52.38 76.15 46.02 72.54 81.89 91.68 141.83 43.36 41.88 235.33 156.13 193.80 154.37 153.34 75.11 101.18 110.71 58.66 34.23 43 I17 Intron 0 15.27 11.00 73.67 32.31 11.85 24.66 19.11 37.17 37.42 29.99 48.49 15.95 14.36 38.88 52.64 61.41 37.89 99.52 61.13 27.56 36.12 23.92 30.35 44 I17_AR1 ActiveIntronRegion 0 15.32 11.03 73.91 32.41 11.89 24.74 19.17 37.29 37.54 30.08 48.65 16.01 14.40 39.01 52.81 61.61 38.01 99.84 61.32 27.65 36.24 23.99 30.45 45 E18_Aa NovelBoundary 0 17.11 29.27 95.89 32.83 27.16 18.00 15.55 37.83 22.08 18.21 30.38 0.00 6.82 29.90 31.89 44.26 29.55 89.50 17.41 21.03 20.20 13.53 4.10 46 ER18a ExonRegion 0 46.31 47.61 225.99 67.35 52.81 93.95 76.17 105.06 111.58 103.19 209.62 57.30 59.87 251.40 244.29 262.98 200.83 231.80 150.82 111.15 175.91 89.93 100.85 47 E18a_E19a KnownJunction 0 79.94 81.50 287.48 103.48 115.03 113.91 141.06 152.67 157.75 103.93 220.74 57.17 59.90 271.18 239.20 296.76 225.15 268.66 163.77 141.32 205.22 74.83 141.28 48 ER19a ExonRegion 0 57.65 67.98 317.18 107.97 78.97 93.33 96.96 157.14 164.99 122.55 278.87 54.63 51.23 270.45 304.16 241.59 198.27 232.87 121.01 164.03 183.03 74.89 113.10 49 E19a_E20a KnownJunction 0 92.91 73.80 370.45 115.30 114.52 106.64 85.85 171.85 154.86 104.20 267.49 80.58 46.91 282.77 362.69 307.44 205.80 267.33 173.18 163.76 172.91 106.06 128.13 50 ER20a ExonRegion 1 79.72 72.78 331.11 114.46 93.70 95.07 102.35 149.07 145.64 123.84 298.44 48.87 30.84 293.90 296.76 288.14 202.95 312.72 141.45 147.99 208.13 83.86 111.40 51 E20_Da NovelBoundary 0 28.00 18.35 43.26 31.16 23.85 21.52 12.72 22.63 36.63 15.82 60.44 0.00 13.31 31.96 31.15 59.47 30.57 48.50 17.79 14.57 27.92 9.12 15.45 52 E20a_E21a KnownJunction 1 89.57 88.34 304.63 102.35 102.89 104.26 154.70 135.17 128.27 94.39 253.75 24.76 66.07 309.14 338.59 275.40 189.90 247.97 144.57 132.50 189.47 67.48 113.36 53 E21_Aa NovelBoundary 0 42.53 30.39 38.59 13.48 7.22 23.74 23.01 26.12 18.26 18.43 37.27 12.75 0.00 4.83 22.25 8.37 26.09 31.46 13.65 11.51 26.81 23.51 7.94 54 ER21a ExonRegion 1 68.07 81.67 276.40 91.02 92.35 100.66 113.61 141.64 139.13 104.83 262.46 36.74 79.10 283.43 289.50 271.59 171.56 256.24 129.31 125.76 169.27 91.96 94.13 55 E21a_E22a KnownJunction 1 112.09 105.77 213.33 79.28 115.37 121.12 119.50 122.28 112.27 109.70 279.33 24.76 87.98 263.29 358.98 301.03 165.68 221.11 152.10 133.14 166.80 103.79 103.20 56 E22_Aa NovelBoundary 0 44.01 14.47 58.07 16.12 27.59 11.07 6.76 31.96 18.34 13.67 15.16 0.00 0.00 17.07 15.20 12.05 13.00 28.85 18.45 5.69 7.72 14.88 8.62 57 ER22a ExonRegion 0 73.92 81.79 288.29 96.31 85.28 91.40 97.35 125.30 133.00 108.52 247.20 41.49 35.23 268.48 280.18 225.83 189.17 201.30 122.64 141.96 186.14 83.76 69.87 58 E22_Da NovelBoundary 0 39.27 23.94 125.54 30.07 16.21 53.61 39.75 27.72 34.98 28.74 76.02 17.41 21.26 39.56 66.38 74.94 30.67 54.22 27.58 23.33 58.13 25.41 23.65 59 E22a_E23a KnownJunction 0 67.12 76.30 172.97 85.74 36.76 64.11 59.18 103.96 95.75 107.90 135.03 25.66 27.43 136.80 237.59 146.71 161.76 119.55 51.86 93.51 157.96 62.64 41.32 60 I22 Intron 0 19.99 3.84 22.42 6.71 11.37 15.59 15.63 8.51 14.78 3.23 35.60 9.14 1.82 27.47 44.49 43.51 18.71 7.80 9.03 21.10 35.38 21.65 19.41 61 I22_AR1 ActiveIntronRegion 0 20.37 3.91 22.84 6.84 11.59 15.88 15.91 8.66 15.04 3.29 36.27 9.31 1.86 27.98 45.30 44.25 19.06 7.93 9.20 21.50 36.05 22.05 19.78 62 E23_Aa NovelBoundary 0 74.09 9.80 78.38 20.68 17.23 18.34 30.38 29.66 27.84 10.21 30.48 6.00 13.64 31.84 47.22 27.51 24.50 24.17 19.39 17.07 33.79 21.00 31.41 63 ER23a ExonRegion 0 82.87 80.53 245.89 94.55 80.43 95.49 103.02 126.04 141.09 113.15 249.72 45.10 49.28 233.43 277.79 256.23 205.99 214.39 124.02 133.29 177.36 104.43 82.13 64 E23a_E24a KnownJunction 0 164.33 126.69 336.71 157.32 191.09 147.30 135.49 173.00 203.67 145.16 400.58 97.53 107.79 336.81 342.91 337.26 295.18 298.51 152.38 151.29 240.93 126.57 128.47 65 ER24a ExonRegion 0 121.61 91.07 325.21 117.95 98.59 113.38 89.79 154.49 163.17 133.84 301.12 87.11 77.91 269.81 308.38 274.18 245.01 252.28 157.95 132.48 217.14 120.83 109.85 66 E24a_E25a KnownJunction 0 194.03 141.55 493.98 221.58 85.40 174.33 118.05 250.76 244.47 158.89 326.35 162.95 108.43 364.71 393.10 470.05 245.63 317.91 272.10 172.77 279.60 156.15 127.87 67 ER25a ExonRegion 0 123.70 105.78 383.53 152.27 109.88 134.83 116.59 204.12 188.52 129.26 308.89 104.79 80.49 313.49 315.24 327.35 265.86 299.68 158.17 140.25 233.85 123.45 124.40 68 E25a_E26a KnownJunction 0 201.22 135.96 461.13 203.20 234.64 252.24 180.10 207.14 194.67 144.71 290.86 88.23 72.56 357.53 371.22 336.24 253.30 288.72 129.60 111.02 213.07 110.04 129.33 69 ER26a ExonRegion 0 136.32 97.33 369.38 148.18 100.78 126.77 102.48 192.64 164.08 140.68 232.89 79.11 60.62 249.65 340.27 269.83 196.61 297.18 126.75 138.34 168.74 114.10 98.87 70 E26a_E27a KnownJunction 1 137.36 126.16 429.29 162.88 104.75 90.46 104.18 218.80 131.02 167.94 201.58 18.46 28.89 185.65 191.61 139.37 207.76 124.03 65.13 152.38 125.84 51.93 64.36 71 ER27a ExonRegion 0 158.55 121.77 358.28 146.02 104.40 119.64 109.45 193.58 162.27 138.34 248.57 61.68 70.03 228.65 390.93 281.11 191.54 254.16 112.07 146.93 165.21 98.80 90.62 72 E27a_E28a KnownJunction 0 202.92 114.78 443.89 190.19 141.60 139.18 143.88 265.95 195.95 137.59 299.39 71.72 110.71 218.55 372.21 243.01 208.98 329.76 185.79 180.12 177.42 95.71 68.63 73 I27 Intron 0 16.61 5.58 10.51 6.11 15.05 19.18 4.33 13.81 10.83 8.05 8.09 5.53 6.89 5.45 14.68 8.16 6.91 13.93 10.83 3.62 8.35 6.27 5.76 74 I27_AR1 ActiveIntronRegion 0 16.69 5.61 10.56 6.14 15.12 19.28 4.35 13.88 10.88 8.09 8.13 5.56 6.93 5.48 14.76 8.20 6.94 14.01 10.89 3.64 8.38 6.30 5.79 75 ER28a ExonRegion 0 139.87 91.40 391.42 197.79 101.04 120.72 98.16 220.47 167.18 144.85 283.52 61.19 47.62 268.21 382.81 322.73 200.31 335.87 135.11 139.57 174.59 101.70 106.38 76 E28_Da NovelBoundary 0 13.48 6.71 74.69 27.84 13.67 22.77 18.24 36.97 35.99 18.13 22.53 10.80 6.33 21.54 14.96 56.74 0.00 88.46 36.61 23.52 12.05 26.88 23.22 77 E28a_E29a KnownJunction 0 167.59 121.43 362.88 208.30 75.81 86.20 99.19 210.26 138.40 153.41 204.42 30.01 31.98 170.64 320.05 199.43 162.79 290.13 96.57 125.28 109.16 78.32 85.28 78 I28 Intron 0 31.32 8.80 32.43 22.20 17.06 11.69 13.87 22.28 23.89 13.23 35.21 8.81 13.44 27.67 29.41 49.40 15.78 38.26 22.48 9.69 14.54 17.55 13.37 79 I28_AR1 ActiveIntronRegion 0 31.60 8.88 32.72 22.40 17.21 11.80 13.99 22.46 24.10 13.35 35.51 8.89 13.56 27.92 29.68 49.84 15.92 38.60 22.67 9.78 14.67 17.71 13.49 80 E29_Aa NovelBoundary 0 33.56 16.05 48.61 31.50 8.32 6.76 17.31 24.07 23.52 23.42 21.43 6.00 6.82 59.27 55.26 36.32 29.83 24.17 20.80 20.77 11.68 13.59 0.00 81 ER29a ExonRegion 0 86.25 66.63 204.48 91.70 84.86 76.37 60.55 144.55 110.48 90.26 181.85 31.08 32.27 188.30 290.56 152.74 122.49 150.11 67.22 115.55 107.49 68.77 63.21