Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC133485.2 Gene 0 5.42 38.23 29.82 8.19 32.45 30.09 72.88 36.31 25.88 51.79 5.45 9.11 10.26 17.32 5.86 11.23 4.30 119.01 40.35 125.65 3.70 6.38 6.05 2 433784 Transcript 0 5.03 29.96 23.12 6.82 23.14 21.28 55.14 30.53 20.20 43.17 4.55 4.77 5.67 13.12 4.04 9.94 3.21 95.19 33.13 97.27 2.86 4.97 5.41 3 ER1a ExonRegion 0 2.06 12.63 1.66 0.06 24.46 22.90 34.23 4.84 3.46 11.22 0.00 0.00 0.00 4.08 2.16 4.36 0.00 40.83 19.23 20.87 2.14 0.00 0.00 4 E1a_E2a KnownJunction 0 0.00 14.47 6.48 0.00 3.40 0.00 9.14 12.98 4.63 7.28 0.00 0.00 0.00 2.12 0.00 0.00 0.00 95.88 12.33 19.88 0.00 0.00 0.00 5 E2_Aa NovelBoundary 0 0.00 21.44 8.40 0.00 11.80 33.62 34.09 13.64 14.50 2.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.35 4.80 27.68 0.00 0.00 0.00 6 ER2a ExonRegion 0 0.76 15.72 20.11 8.38 7.09 12.62 26.34 23.38 18.66 35.67 4.49 2.35 4.55 8.77 3.38 9.12 2.44 78.54 19.36 84.63 8.62 3.30 3.19 7 E2_Da NovelBoundary 0 0.00 3.35 13.33 0.00 0.00 0.00 35.64 5.09 9.20 3.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.76 0.00 14.25 0.00 0.00 0.00 8 E2a_E3a KnownJunction 0 6.89 2.70 42.70 30.30 8.57 15.39 22.61 39.43 43.43 69.68 22.06 0.00 13.64 39.97 23.98 46.65 12.06 145.92 56.28 162.54 13.22 16.29 16.82 9 I2 Intron 0 1.74 9.68 6.16 0.52 8.81 2.41 23.74 6.69 4.55 6.07 0.30 0.46 1.21 0.91 0.31 1.15 0.59 10.85 4.59 26.99 0.28 0.43 0.30 10 I2_SR1 SilentIntronRegion 0 1.74 9.69 6.16 0.52 8.82 2.41 23.76 6.70 4.55 6.07 0.30 0.46 1.21 0.91 0.31 1.15 0.59 10.86 4.59 27.00 0.28 0.43 0.30 11 E3_Aa NovelBoundary 0 108.24 84.66 64.34 76.68 92.95 49.63 129.31 81.74 57.67 39.46 16.11 22.81 56.33 6.83 11.50 56.65 33.29 90.08 27.77 128.73 26.32 9.25 41.49 12 ER3a ExonRegion 0 7.42 35.15 30.30 6.67 38.55 34.57 82.29 36.18 29.05 53.29 5.75 13.34 17.33 19.98 13.18 14.65 5.96 158.01 49.02 143.57 4.59 8.92 7.77 13 E3_Da NovelBoundary 0 0.00 18.68 7.04 0.00 3.65 2.33 39.13 13.88 9.20 5.56 0.00 0.00 0.00 0.00 0.00 4.36 0.00 10.90 24.28 33.05 0.00 0.00 0.00 14 E3a_E4a KnownJunction 0 17.34 48.08 30.78 0.00 49.92 28.45 93.36 39.97 31.86 76.37 0.00 0.00 0.00 14.19 0.00 0.00 0.00 91.78 51.58 139.53 0.00 5.51 0.00 15 I3 Intron 0 2.90 6.26 4.38 1.39 6.41 4.39 26.28 7.93 7.55 11.70 2.65 2.44 3.78 2.55 0.00 4.07 2.26 14.16 7.63 14.55 0.75 1.43 0.00 16 I3_SR1 SilentIntronRegion 0 2.94 6.35 4.43 1.41 6.50 4.45 26.64 8.04 7.65 11.85 2.68 2.47 3.83 2.59 0.00 4.12 2.29 14.35 7.74 14.75 0.76 1.45 0.00 17 E4_Aa NovelBoundary 0 3.78 0.00 13.45 9.26 0.00 8.06 42.53 27.93 25.09 18.80 2.16 0.00 6.49 2.41 0.00 3.50 0.00 5.64 4.52 25.82 4.94 0.00 4.35 18 ER4a ExonRegion 0 16.77 62.63 39.89 50.36 80.70 63.83 145.29 87.17 75.85 132.49 31.02 42.93 44.59 57.08 13.75 39.67 20.26 185.70 80.57 215.04 12.17 25.63 29.16 19 E4_Da NovelBoundary 0 9.41 12.10 15.85 69.19 19.35 7.72 42.48 32.69 69.27 41.56 2.74 21.31 8.44 19.07 0.00 8.20 4.68 28.27 12.61 13.23 3.15 0.00 0.00 20 E4a_E5a KnownJunction 0 13.04 62.23 26.40 3.66 18.76 31.35 80.16 60.91 26.71 63.29 2.37 6.45 0.00 7.18 0.00 7.86 4.21 170.58 45.74 139.02 0.00 5.82 19.04 21 I4 Intron 0 3.15 9.77 13.15 19.48 10.71 12.58 33.16 22.37 22.07 24.21 1.55 6.61 8.93 7.06 0.84 3.39 0.38 12.93 8.38 25.79 1.01 9.53 1.67 22 I4_SR1 SilentIntronRegion 0 3.16 9.81 13.20 19.57 10.76 12.64 33.31 22.46 22.17 24.31 1.55 6.64 8.97 7.09 0.84 3.40 0.38 12.98 8.42 25.90 1.01 9.57 1.68 23 E5_Aa NovelBoundary 0 3.11 19.80 39.00 94.56 11.29 21.75 41.82 40.13 54.37 68.04 0.00 12.00 6.82 14.30 5.19 4.36 3.46 36.60 20.33 32.02 11.37 3.06 0.00 24 ER5a ExonRegion 0 3.42 44.13 31.79 1.72 16.49 22.44 56.64 42.52 24.69 56.87 2.51 2.76 3.45 13.16 2.93 6.27 2.19 124.15 50.33 157.83 0.96 4.32 2.48 25 E5_Da NovelBoundary 0 0.00 9.80 17.47 22.34 8.57 2.73 12.19 17.46 20.98 18.56 0.00 0.00 0.00 2.71 5.56 0.00 0.00 17.82 9.32 46.72 0.00 2.94 0.00 26 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 I5 Intron 0 1.82 15.10 13.16 17.04 14.39 10.26 38.89 12.47 16.44 12.87 3.33 10.66 13.33 6.71 1.98 4.48 4.62 13.45 8.91 30.91 2.85 3.81 4.11 28 I5_SR1 SilentIntronRegion 0 1.83 15.16 13.22 17.12 14.45 10.30 39.04 12.52 16.51 12.93 3.34 10.70 13.38 6.74 1.99 4.50 4.64 13.51 8.95 31.04 2.86 3.83 4.12 29 E6_Aa NovelBoundary 0 6.67 22.17 27.62 47.85 32.68 24.30 70.97 28.67 35.73 42.33 2.37 19.81 7.47 5.24 0.00 16.15 4.68 51.61 14.21 28.06 14.76 5.88 12.72 30 ER6a ExonRegion 0 2.83 35.06 35.64 0.60 23.49 30.65 78.27 34.55 16.47 41.67 0.00 2.89 1.47 8.63 1.16 4.60 1.07 135.90 30.48 134.59 0.60 1.24 2.60 31 E6_Da NovelBoundary 0 0.00 10.06 2.75 0.00 0.00 7.38 12.45 8.67 1.10 8.97 0.00 0.00 0.00 0.00 0.00 3.76 0.00 33.29 8.85 31.70 0.00 0.00 0.00 32 E6a_E7a KnownJunction 0 0.00 11.77 13.01 0.00 7.39 12.72 39.44 18.52 0.00 19.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40.00 18.35 28.63 0.00 0.00 0.00 33 I6 Intron 0 2.11 8.51 8.37 6.68 6.66 2.92 26.24 10.91 6.42 13.70 1.16 2.35 2.39 2.82 1.90 2.37 0.16 20.27 5.08 30.52 0.99 1.56 1.90 34 I6_SR1 SilentIntronRegion 0 2.11 8.53 8.38 6.69 6.67 2.93 26.29 10.93 6.43 13.73 1.16 2.35 2.40 2.82 1.91 2.37 0.16 20.31 5.09 30.58 0.99 1.56 1.91 35 E7_Aa NovelBoundary 0 0.00 5.79 12.54 0.00 0.00 5.34 28.31 2.30 1.65 25.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36.19 9.04 14.70 0.00 0.00 0.00 36 ER7a ExonRegion 0 4.93 59.93 46.37 0.59 25.50 24.64 69.02 38.19 21.49 48.02 0.00 0.89 0.00 10.52 0.00 2.62 0.00 95.56 34.29 121.07 0.64 2.43 0.10 37 E7a_E8a KnownJunction 0 0.00 17.50 8.22 0.00 13.07 5.45 38.29 9.69 0.00 13.19 0.00 0.00 0.00 0.00 0.00 8.72 0.00 29.06 8.94 31.32 0.00 0.00 0.00 38 E8_Aa NovelBoundary 0 0.00 18.81 1.71 0.00 0.00 0.00 30.47 2.14 3.04 6.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.35 0.00 0.00 0.00 0.00 0.00 39 ER8a ExonRegion 0 0.00 27.44 13.42 0.00 29.70 14.19 52.08 9.65 6.65 19.37 0.00 0.00 0.00 11.19 0.00 4.56 0.00 35.97 20.40 60.58 0.00 1.07 0.00 40 IG26_AR19 ActiveIntergenicRegion 0 6.68 25.81 26.02 0.94 10.70 22.99 41.76 32.04 20.43 28.85 0.00 0.00 0.00 9.62 0.00 5.72 0.00 75.19 31.85 54.99 2.88 1.12 8.81 41 IG26_AR18 ActiveIntergenicRegion 0 2.93 10.24 11.93 1.41 9.72 11.00 18.82 11.96 6.83 9.25 0.00 0.00 0.08 1.25 0.00 0.89 4.95 31.29 14.39 22.41 0.81 0.00 1.17