Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CDH8 Gene 0 8.83 160.40 2.72 4.74 55.71 2.60 8.46 25.67 26.15 9.46 2.46 0.00 0.00 0.00 0.00 0.00 0.00 14.63 0.46 29.83 0.32 0.49 0.09 2 425507 Transcript 0 12.26 118.14 2.18 4.52 110.60 3.75 7.84 12.26 7.78 2.79 0.52 0.00 0.00 0.00 0.00 0.00 0.00 3.46 0.00 12.23 0.00 0.00 0.00 3 394178 Transcript 0 0.05 1.92 0.05 0.06 0.59 0.03 0.09 0.39 0.24 0.23 0.04 0.00 0.00 0.00 0.00 0.00 0.00 0.14 0.00 0.23 0.03 0.00 0.00 4 299345 Transcript 0 9.29 154.20 1.99 3.16 43.99 1.36 2.71 17.09 20.83 4.35 1.79 0.00 0.00 0.00 0.00 0.00 0.00 1.10 0.00 7.10 0.00 0.44 0.10 5 IG50_AR3 ActiveIntergenicRegion 0 2.97 19.44 0.00 0.32 8.40 0.00 0.23 5.29 1.30 1.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.03 3.46 0.00 0.00 0.00 6 ER1a ExonRegion 0 0.57 18.37 0.86 0.36 9.13 0.57 1.86 6.71 4.59 2.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.81 0.64 11.54 0.00 0.00 0.40 7 E1a_E2a KnownJunction 0 0.00 66.63 6.12 1.83 51.10 2.90 23.98 22.84 13.54 16.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30.18 0.00 29.21 0.00 0.00 0.00 8 ER2a ExonRegion 0 7.91 128.76 2.57 5.26 60.21 1.37 14.03 39.08 31.10 11.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35.07 0.00 53.11 0.58 0.24 0.00 9 E2a_E3a KnownJunction 0 7.19 186.41 2.72 8.86 46.52 2.16 15.81 32.98 38.48 13.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50.08 0.00 38.41 2.97 0.00 0.00 10 ER3a ExonRegion 0 10.60 229.82 4.30 8.98 86.59 5.00 23.40 53.15 41.34 21.86 12.70 0.00 0.00 0.00 0.00 0.00 0.00 37.92 0.00 55.95 0.63 0.36 0.00 11 E3a_E4a KnownJunction 0 0.00 278.44 5.00 11.82 36.42 2.27 15.06 57.83 49.57 24.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36.93 0.00 50.30 0.00 0.00 0.00 12 ER4a ExonRegion 0 7.57 208.83 3.10 9.03 90.62 2.57 20.74 35.04 49.91 19.68 3.37 0.00 0.00 0.00 0.00 0.00 0.00 30.83 0.00 69.40 0.94 0.89 0.00 13 E4a_E5a KnownJunction 0 7.48 278.37 0.00 11.29 157.30 2.27 30.69 46.87 43.52 23.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.85 0.00 83.73 0.00 0.00 0.00 14 ER5a ExonRegion 0 10.31 246.09 4.96 12.13 98.97 10.59 19.26 49.73 48.08 23.12 4.28 0.00 0.00 0.00 0.00 0.00 0.00 36.67 0.00 82.13 0.67 1.85 0.00 15 E5a_E7a KnownJunction 0 13.63 226.28 4.85 10.95 101.44 2.50 17.58 43.17 54.08 24.18 2.42 0.00 0.00 0.00 0.00 0.00 0.00 27.69 0.00 86.99 0.00 0.00 0.00 16 E5b_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER5b ExonRegion 0 0.00 0.81 0.00 0.00 0.00 0.00 0.00 1.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 E6a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 ER6a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER7a ExonRegion 0 18.31 283.33 6.73 14.16 111.94 7.77 19.34 57.42 52.17 25.38 3.80 0.00 0.00 0.00 0.00 0.00 0.00 36.18 0.86 83.67 1.31 1.73 0.00 21 E7a_E9a KnownJunction 0 10.52 361.19 7.60 12.75 133.70 20.95 11.00 49.66 55.76 17.19 2.58 0.00 0.00 0.00 0.00 0.00 0.00 43.40 0.00 86.61 2.53 0.00 0.00 22 ER8a ExonRegion 0 0.00 1.17 0.00 0.00 1.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER9a ExonRegion 0 19.45 311.80 5.40 11.07 115.15 7.04 22.25 52.31 47.23 26.43 3.34 0.00 0.00 0.00 0.00 0.00 0.00 42.88 3.20 73.18 1.67 0.84 0.00 25 E9a_E10a KnownJunction 0 15.04 324.22 8.78 5.49 151.36 0.00 10.64 60.71 42.51 38.71 4.69 0.00 0.00 0.00 0.00 0.00 0.00 68.19 0.00 73.50 0.00 0.00 0.00 26 E9b_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER9b ExonRegion 0 0.00 2.60 0.00 0.00 0.00 0.00 0.07 0.00 0.00 0.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.41 0.00 0.00 0.24 0.00 0.00 28 ER10a ExonRegion 0 14.58 287.58 8.54 9.43 122.03 3.84 21.59 73.35 56.19 33.85 6.01 0.00 0.00 0.00 0.00 0.00 0.00 42.07 1.19 95.53 0.45 1.55 0.00 29 E10a_E12b KnownJunction 0 22.67 339.74 15.58 15.35 121.48 13.00 18.50 51.42 65.60 27.05 7.26 0.00 0.00 0.00 0.00 0.00 0.00 27.36 0.00 57.91 3.15 0.00 0.00 30 I10_SR2 SilentIntronRegion 0 2.21 43.43 0.46 1.06 12.65 0.91 0.99 4.92 2.89 0.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.02 0.00 2.83 0.00 0.00 0.00 31 ER11a ExonRegion 0 0.00 2.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 ER12a ExonRegion 0 0.53 13.81 0.56 0.62 4.91 0.38 0.88 2.52 2.62 1.29 0.40 0.00 0.00 0.00 0.00 0.00 0.00 1.15 0.00 2.48 0.09 0.00 0.00 34 ER12b ExonRegion 0 48.77 497.34 12.45 11.15 193.21 15.26 38.80 87.55 76.91 28.25 5.67 0.00 0.00 0.00 0.00 0.00 0.00 31.76 1.34 83.10 2.26 1.76 0.00 35 E12_Da KnownBoundary 0 39.93 210.95 5.62 10.16 178.10 8.69 17.58 33.52 19.44 5.69 2.53 0.00 0.00 0.00 0.00 0.00 0.00 8.95 0.00 26.40 0.00 0.00 0.00 36 E12a_E13a KnownJunction 0 3.78 154.38 12.42 2.06 16.38 0.00 0.00 12.57 38.63 5.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.60 0.00 26.85 0.00 0.00 0.00 37 ER12c ExonRegion 0 12.26 118.14 2.18 4.52 110.60 3.75 7.84 12.26 7.78 2.79 0.52 0.00 0.00 0.00 0.00 0.00 0.00 3.46 0.00 12.23 0.00 0.00 0.00 38 E12_Db NovelBoundary 0 36.38 267.85 5.85 10.19 136.67 0.00 17.71 37.58 28.93 12.17 2.05 0.00 0.00 0.00 0.00 0.00 0.00 3.48 0.00 21.35 0.00 0.00 0.00 39 I12_AR1 ActiveIntronRegion 0 14.63 100.13 2.90 7.08 66.75 1.96 11.46 33.47 13.27 8.52 1.10 0.00 0.00 0.00 0.00 0.00 0.10 3.44 0.68 17.70 0.00 0.57 0.00 40 ER13a ExonRegion 0 3.12 166.27 4.52 4.85 39.30 0.54 2.67 13.17 31.75 4.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.25 0.00 24.36 0.00 0.51 0.00 41 E13a_E14a KnownJunction 0 10.15 153.13 6.27 0.00 73.94 5.45 4.15 14.25 23.64 5.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.27 0.00 24.29 0.00 3.12 0.00 42 E14_Aa NovelBoundary 0 0.00 3.22 0.00 0.00 32.09 0.00 0.00 0.00 1.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.56 0.00 0.00 0.00 43 ER14a ExonRegion 0 3.49 196.83 2.40 1.97 37.14 1.67 1.93 11.01 30.51 4.81 3.18 0.00 0.00 0.00 0.00 0.00 0.00 7.73 1.11 17.97 0.00 0.18 0.00 44 E14a_E15a KnownJunction 0 22.89 348.23 4.94 3.90 82.34 2.33 1.94 19.39 36.98 3.33 2.00 0.00 0.00 0.00 0.00 0.00 0.00 3.94 7.15 33.17 0.00 0.00 0.00 45 ER15a ExonRegion 0 7.44 159.84 0.75 3.73 46.44 1.14 2.84 14.16 19.38 3.80 2.40 0.00 0.00 0.00 0.00 0.00 0.00 2.12 0.58 14.34 0.00 0.33 0.00 46 E15_Da KnownBoundary 0 3.48 185.23 0.00 1.43 32.09 0.00 10.11 8.21 12.88 1.34 2.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.81 0.00 0.00 0.00 47 ER15b ExonRegion 0 9.29 154.20 1.99 3.16 43.99 1.36 2.71 17.09 20.83 4.35 1.79 0.00 0.00 0.00 0.00 0.00 0.00 1.10 0.00 7.10 0.00 0.44 0.10 48 IG49_AR11 ActiveIntergenicRegion 0 1.05 33.61 0.00 0.00 12.95 0.00 0.16 1.11 3.28 1.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.68 0.00 2.64 0.00 0.00 0.00 49 IG49_SR10 SilentIntergenicRegion 0 0.12 33.67 0.00 0.41 6.36 0.00 0.00 1.13 3.07 0.54 0.23 0.00 0.00 0.00 0.00 0.00 0.00 0.74 0.00 2.63 0.00 0.00 0.00 50 IG49_AR10 ActiveIntergenicRegion 0 0.12 16.99 0.00 0.20 4.93 0.00 0.26 1.80 4.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.74 0.00 0.00 0.00