Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CDH11 Gene 0 35.22 8.56 24.46 12.57 38.44 19.06 24.04 38.98 52.14 41.51 0.41 0.00 2.21 0.04 0.19 0.00 66.92 12.04 5.70 6.60 648.28 900.24 456.97 2 268603 Transcript 0 22.75 3.53 16.40 9.42 52.36 26.38 27.76 37.82 48.08 33.14 1.34 0.00 0.00 0.00 0.00 0.00 70.41 17.02 2.40 9.14 738.05 649.32 483.13 3 394156 Transcript 0 0.80 0.00 2.58 0.39 5.94 2.28 1.00 2.08 3.79 3.12 0.00 0.00 0.31 0.00 0.00 0.00 2.18 0.26 2.05 0.40 38.94 39.04 32.85 4 IG8_AR4 ActiveIntergenicRegion 0 3.15 0.00 0.27 1.16 0.00 1.36 0.00 0.12 0.00 0.00 0.00 0.00 1.15 0.00 0.00 0.00 10.15 0.00 0.00 0.00 12.51 9.29 4.85 5 IG8_AR3 ActiveIntergenicRegion 0 0.00 2.55 0.00 0.00 0.00 0.00 1.14 1.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.41 5.79 4.73 6 IG8_SR2 SilentIntergenicRegion 0 0.00 1.27 0.00 0.00 0.00 0.00 0.00 1.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.01 1.02 3.79 7 IG8_AR2 ActiveIntergenicRegion 0 0.00 0.12 0.00 0.00 0.32 0.00 0.39 0.00 0.41 0.00 0.69 0.00 0.00 0.00 0.00 0.00 25.24 0.33 0.00 0.25 9.57 1.97 3.00 8 IG8_SR1 SilentIntergenicRegion 0 0.00 0.13 0.00 0.00 0.00 0.00 0.08 0.00 0.14 0.21 0.36 0.00 0.24 0.00 0.00 0.00 15.12 0.00 0.00 0.27 2.68 2.99 1.68 9 IG8_AR1 ActiveIntergenicRegion 0 0.00 0.33 0.00 0.00 0.00 0.00 0.00 0.00 0.61 0.00 0.00 0.00 0.64 0.00 0.00 0.00 9.47 0.00 0.00 0.00 9.78 2.74 6.56 10 ER1a ExonRegion 0 0.82 0.42 0.15 0.00 1.25 1.26 1.29 1.08 0.80 0.25 0.00 0.00 0.00 0.00 0.00 0.00 5.35 1.38 0.00 0.00 45.21 28.54 40.16 11 E1_Ab KnownBoundary 0 7.33 6.18 3.84 1.53 23.01 11.92 14.79 6.70 12.09 2.44 0.00 0.00 0.00 0.00 0.00 0.00 35.72 11.23 0.00 0.00 322.72 236.36 310.12 12 ER1b ExonRegion 0 2.43 0.89 4.08 2.93 5.56 4.71 5.18 5.78 10.57 5.52 0.00 0.00 0.00 0.00 0.00 0.00 19.64 4.19 0.00 3.82 312.56 163.45 179.10 13 E1a_E2a KnownJunction 0 3.78 0.00 4.79 7.09 3.31 0.00 0.00 8.75 23.52 23.93 0.00 0.00 5.68 0.00 0.00 0.00 35.06 2.03 0.00 17.32 820.96 387.85 248.83 14 I1_SR1 SilentIntronRegion 0 0.23 0.66 1.84 0.43 0.29 0.00 0.71 1.39 1.80 1.55 0.63 0.00 0.00 0.00 0.00 0.00 18.70 1.00 0.52 1.61 9.20 2.18 7.20 15 I1_AR2 ActiveIntronRegion 0 0.96 0.32 2.24 0.00 0.71 0.29 3.19 1.23 3.03 1.44 0.61 0.00 0.00 0.14 0.00 0.00 23.20 1.36 1.89 1.46 7.90 4.76 8.68 16 I1_SR2 SilentIntronRegion 0 1.71 1.28 4.33 0.23 3.74 1.13 3.77 2.00 3.58 3.65 2.01 0.00 2.22 0.00 0.00 0.00 21.48 1.81 1.03 2.76 6.98 6.20 11.06 17 I1_AR3 ActiveIntronRegion 0 2.71 3.85 8.74 1.43 3.94 0.36 5.94 4.25 6.15 4.62 1.31 0.00 1.93 0.00 0.42 0.00 19.50 0.54 0.42 1.28 3.65 9.86 6.17 18 I1_AR4 ActiveIntronRegion 0 6.83 2.90 11.79 6.10 7.83 0.00 9.07 3.11 6.64 10.75 1.50 0.00 2.70 0.00 0.00 0.00 29.71 0.00 0.00 3.19 6.06 14.85 13.58 19 I1_SR3 SilentIntronRegion 0 5.78 5.80 10.50 1.15 6.35 0.22 6.02 4.46 9.22 6.82 1.25 0.00 0.91 0.32 0.00 0.00 27.99 1.50 1.88 1.60 12.59 8.30 12.99 20 I1_AR5 ActiveIntronRegion 0 2.70 1.79 7.34 1.96 6.53 0.00 4.98 2.09 8.38 3.73 0.91 0.00 0.73 0.00 0.00 0.00 16.64 0.35 1.20 1.97 4.29 6.85 6.65 21 ER2a ExonRegion 0 5.18 0.00 4.18 5.89 11.97 10.64 5.86 7.92 35.08 21.12 1.02 0.00 3.15 0.00 0.00 0.00 75.76 13.16 2.60 9.40 865.79 515.43 495.07 22 E2a_E3a KnownJunction 0 3.26 0.00 2.90 11.95 16.64 33.11 15.41 19.43 50.58 31.40 2.26 0.00 0.00 0.00 0.00 0.00 73.96 7.63 0.00 11.12 1068.62 753.60 362.54 23 I2_AR6 ActiveIntronRegion 0 0.00 0.00 0.00 2.73 0.00 0.00 0.00 0.00 3.05 2.51 0.00 0.00 0.00 0.00 0.00 0.00 14.54 0.00 0.00 0.00 17.22 23.31 19.36 24 ER3a ExonRegion 0 10.33 2.60 11.43 6.67 9.59 14.62 14.03 21.96 37.71 32.66 0.17 0.00 0.49 0.00 0.26 0.00 92.33 25.01 7.21 8.67 1161.40 739.96 494.02 25 E3a_E4a KnownJunction 0 19.19 0.00 13.66 3.23 20.63 37.93 10.78 40.79 54.83 46.85 0.00 0.00 0.00 0.00 0.00 0.00 96.96 26.41 4.14 9.59 1405.37 883.78 706.55 26 ER4a ExonRegion 0 17.46 4.32 18.95 6.83 27.89 16.78 17.25 37.80 71.82 56.94 0.26 0.00 2.04 0.00 0.35 0.00 136.89 29.04 6.34 11.88 1738.67 1198.08 882.68 27 E4a_E5a KnownJunction 0 26.52 5.66 35.87 14.02 26.49 33.11 24.73 44.98 93.55 53.27 2.21 0.00 0.00 0.00 0.00 0.00 127.91 36.60 8.85 20.65 1710.99 1361.40 977.58 28 ER5a ExonRegion 0 16.60 5.59 34.24 14.31 45.96 29.04 29.01 51.59 81.38 68.15 1.00 0.00 8.56 0.00 0.00 0.00 193.02 34.23 22.67 15.35 1972.26 1789.71 1246.83 29 E5a_E6a KnownJunction 0 16.82 8.68 24.16 11.02 42.44 31.35 46.86 67.03 94.39 67.56 0.00 0.00 6.82 0.00 0.00 0.00 223.94 33.66 9.04 19.94 2098.58 1680.68 1118.43 30 ER6a ExonRegion 0 18.44 10.40 26.06 11.77 29.99 32.60 24.38 46.00 79.88 57.67 0.59 0.00 5.56 0.00 0.62 0.00 182.85 31.90 13.75 13.11 1869.65 1556.17 991.99 31 E6a_E7a KnownJunction 0 30.38 19.01 27.02 11.52 69.19 40.54 30.52 64.57 75.35 55.31 0.00 0.00 0.00 0.00 0.00 0.00 177.65 11.77 15.62 8.95 1838.31 1546.70 1106.05 32 ER7a ExonRegion 0 32.97 16.19 40.76 14.36 42.44 28.44 45.92 63.41 89.05 62.37 1.09 0.00 5.46 0.00 0.56 0.00 183.69 25.92 11.27 10.55 1451.03 2140.30 1216.60 33 E7a_E8a KnownJunction 0 42.01 21.90 35.01 16.41 14.52 32.59 49.90 94.10 112.96 86.58 0.00 0.00 6.49 0.00 0.00 0.00 181.39 22.22 21.55 0.00 1208.12 2010.85 1238.96 34 ER8a ExonRegion 0 43.09 14.73 36.22 13.29 37.92 37.22 41.06 67.33 97.45 81.53 0.75 0.00 5.93 0.54 0.00 0.00 152.27 36.34 19.89 14.58 1776.22 2142.85 1218.09 35 E8a_E9a KnownJunction 0 29.41 19.14 34.92 27.80 69.52 57.41 65.89 74.30 89.90 74.35 0.00 0.00 0.00 0.00 0.00 0.00 154.56 53.14 21.37 26.40 1682.69 2951.27 1740.38 36 ER9a ExonRegion 0 43.52 11.77 38.69 25.51 73.63 43.73 43.45 78.41 115.26 83.41 0.72 0.00 4.31 0.60 0.21 0.00 200.32 39.46 13.69 19.91 1935.58 2431.35 1604.95 37 E9a_E10a KnownJunction 0 60.31 13.94 64.07 21.91 52.72 17.89 49.42 83.01 144.91 99.01 0.00 0.00 0.00 0.00 4.45 0.00 177.28 61.39 21.84 32.09 1742.55 3350.45 1850.42 38 ER10a ExonRegion 0 57.43 9.62 52.96 26.23 42.15 34.69 41.20 83.04 133.41 93.42 1.47 0.00 3.22 0.62 0.56 0.00 189.38 38.18 17.59 19.01 2086.68 2325.49 1322.26 39 E10a_E11a KnownJunction 0 73.20 8.49 46.33 30.77 59.25 34.53 40.10 82.60 124.01 100.57 0.00 0.00 12.34 0.00 0.00 0.00 140.63 17.95 23.91 14.19 1649.83 1991.99 1203.36 40 ER11a ExonRegion 0 59.32 8.91 57.37 26.30 73.29 50.88 52.75 89.29 124.33 91.52 0.84 0.00 2.78 0.00 0.89 0.00 175.45 27.70 14.01 18.16 1884.86 2189.57 1368.48 41 E11a_E12a KnownJunction 0 56.45 14.54 30.34 27.00 58.40 42.76 46.86 56.68 79.63 62.99 0.00 0.00 0.00 0.00 0.00 0.00 79.85 42.08 27.67 3.26 1555.68 1332.87 935.32 42 ER12a ExonRegion 0 44.09 9.39 27.18 16.97 36.18 25.99 35.86 66.30 76.75 59.86 0.15 0.00 0.78 0.00 0.79 0.00 130.79 29.45 10.05 13.80 1540.78 1271.38 845.00 43 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.53 1.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 0.00 62.33 52.91 38.07 44 E12a_E14a KnownJunction 0 44.67 6.64 32.64 18.85 103.48 51.50 54.23 74.55 95.37 66.03 2.68 0.00 0.00 0.00 0.00 0.00 135.48 32.67 4.80 18.28 1430.89 1270.11 926.10 45 E13_Aa NovelBoundary 0 7.48 3.16 6.65 1.60 16.47 5.11 14.49 8.30 17.48 4.27 0.00 0.00 0.00 0.00 0.00 0.00 11.78 0.00 0.00 0.00 66.47 90.07 78.45 46 ER13a ExonRegion 0 2.41 0.01 4.09 1.16 9.33 1.83 2.99 3.73 6.80 5.77 0.00 0.00 0.94 0.00 0.00 0.00 6.55 0.78 1.35 1.21 45.29 55.78 40.06 47 E13a_E14a KnownJunction 0 0.00 0.00 3.67 0.00 8.49 5.00 0.00 2.51 3.04 2.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.20 8.45 20.40 48 ER14a ExonRegion 0 42.09 9.71 25.00 13.39 44.28 16.97 23.65 36.70 43.90 36.23 0.35 0.00 1.88 0.00 0.12 0.00 33.45 4.31 3.26 3.88 225.72 674.90 236.45