Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CMTM3 Gene 0 118.30 27.71 97.69 40.21 68.23 84.55 44.70 58.61 66.77 38.11 198.67 54.17 61.12 184.22 137.39 78.49 66.93 54.17 54.52 28.29 156.08 141.63 127.82 2 424011 Transcript 0 0.97 0.19 1.01 0.16 2.45 4.78 0.97 1.80 1.92 0.46 2.24 0.98 0.43 3.24 0.85 1.49 1.79 2.14 2.14 1.71 3.11 1.74 4.00 3 361909 Transcript 0 1.86 0.70 1.19 0.15 1.01 0.53 0.24 2.38 1.02 2.31 9.21 1.25 0.00 2.57 0.08 2.21 0.16 2.99 0.02 0.17 4.61 3.51 7.66 4 360086 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.13 5.37 0.00 0.00 0.00 0.00 0.00 7.85 0.00 0.00 0.00 11.24 0.00 4.35 5 460097 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 394108 Transcript 0 0.00 0.90 0.02 0.00 0.00 4.91 0.62 0.20 0.24 0.05 10.09 0.25 0.00 5.80 2.94 3.54 1.07 4.08 1.26 0.00 10.18 2.24 9.24 7 332807 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER1a ExonRegion 0 1.93 0.37 2.01 0.32 4.89 9.55 1.94 3.59 3.85 0.92 4.48 1.96 0.86 6.48 1.69 2.97 3.58 4.28 4.28 3.42 3.82 3.48 8.00 9 E1_Ab KnownBoundary 0 0.00 0.00 3.46 3.80 0.00 5.68 5.87 2.46 4.37 3.22 19.11 0.00 0.00 6.77 0.00 4.36 13.65 11.28 4.52 2.68 23.54 11.57 33.38 10 ER1b ExonRegion 0 3.11 0.00 6.98 1.12 6.16 25.17 4.55 2.24 4.25 5.07 13.46 5.23 4.56 8.13 5.87 8.57 6.77 7.96 4.26 2.36 21.05 7.78 22.27 11 E1_Da KnownBoundary 0 0.00 0.00 3.58 1.93 3.82 5.28 5.52 0.00 3.21 1.32 14.95 0.00 0.00 9.83 0.00 4.10 8.04 1.62 0.00 2.94 11.18 2.88 0.00 12 E1a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.13 5.37 0.00 0.00 0.00 0.00 0.00 7.85 0.00 0.00 0.00 11.24 0.00 4.35 13 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER1c ExonRegion 0 1.60 0.00 5.16 1.36 2.68 6.61 2.29 1.41 1.98 2.99 12.18 0.00 0.00 10.78 2.90 3.06 4.60 3.08 0.00 3.09 12.49 5.43 5.16 15 E1_Db KnownBoundary 0 3.78 0.00 4.94 0.00 0.00 5.74 2.25 1.73 2.72 3.09 12.27 5.25 0.00 16.78 0.00 0.00 0.00 4.44 0.00 2.75 9.02 8.45 8.11 16 E1b_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.41 0.00 0.00 17 ER1d ExonRegion 0 3.71 1.39 2.38 0.30 2.02 1.06 0.47 4.76 2.03 3.06 13.05 2.49 0.00 5.14 0.16 0.65 0.32 3.42 0.04 0.35 4.53 4.57 11.91 18 E1c_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.56 5.37 0.00 0.00 0.00 0.00 3.76 0.00 2.57 0.00 0.00 4.70 2.45 3.41 19 ER2a ExonRegion 0 0.00 0.90 0.02 0.00 0.00 4.91 0.62 0.20 0.24 0.05 10.09 0.25 0.00 5.80 2.94 3.54 1.07 4.08 1.26 0.00 10.18 2.24 9.24 20 E2_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 2.44 0.00 0.00 0.00 0.00 6.84 0.00 0.00 0.00 0.00 3.85 0.00 8.75 0.00 0.00 5.99 0.00 3.93 21 E2_Ac KnownBoundary 0 0.00 5.99 0.00 0.00 0.00 7.21 3.89 0.00 1.27 0.00 16.69 0.00 0.00 9.06 0.00 7.18 4.77 8.29 7.72 0.00 11.86 2.88 21.43 22 ER2b ExonRegion 1 0.00 4.07 1.23 0.00 0.00 14.67 3.97 3.46 1.24 3.44 50.26 4.33 0.00 16.24 8.70 23.78 9.90 16.63 12.74 0.00 55.09 10.42 55.80 23 ER2c ExonRegion 1 6.23 4.07 7.51 1.17 7.77 24.46 7.00 4.04 4.85 4.47 87.91 7.69 27.83 37.94 20.90 26.09 20.79 21.95 21.52 4.59 76.98 16.12 47.48 24 E2_Da NovelBoundary 0 10.89 5.20 35.33 8.99 14.86 15.79 8.48 21.73 10.04 12.28 152.62 17.56 46.43 111.72 73.80 30.25 28.99 40.46 33.79 13.81 99.46 45.01 65.47 25 E2a_E6b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 E2b_E3a KnownJunction 0 10.74 2.76 64.25 17.25 19.61 27.37 19.78 22.92 22.74 26.86 100.87 25.51 38.47 160.10 142.53 93.31 47.12 60.90 101.46 30.04 127.20 69.93 126.17 27 ER2d ExonRegion 0 14.26 2.56 44.86 9.60 14.77 23.68 15.43 12.02 16.92 13.96 133.54 22.21 38.95 153.80 107.72 61.12 44.06 49.33 74.93 20.91 118.62 66.40 103.93 28 ER3a ExonRegion 0 51.19 10.59 105.36 38.81 36.77 83.29 24.33 45.16 61.38 41.98 232.12 61.22 73.57 209.13 129.35 90.46 93.00 76.94 78.78 36.62 231.32 138.97 144.65 29 E3a_E4a KnownJunction 0 38.23 23.81 142.99 73.95 60.70 99.37 30.07 63.05 77.17 62.10 302.39 73.82 151.29 238.74 195.19 98.52 143.90 77.10 84.99 39.56 369.18 213.40 124.20 30 E3a_E5a NovelJunction 0 0.00 3.35 11.95 3.16 0.00 14.14 3.84 2.18 2.63 0.00 9.90 0.00 0.00 9.89 4.45 0.00 7.57 8.54 4.52 6.20 0.00 8.39 4.35 31 ER4a ExonRegion 0 59.99 22.07 124.12 51.36 34.92 71.40 28.67 65.30 90.39 52.42 352.75 79.91 154.04 289.04 191.54 102.94 138.91 66.83 75.55 41.53 305.14 187.36 177.51 32 E4a_E5a KnownJunction 0 116.84 28.61 185.65 67.06 17.23 66.61 17.80 95.58 115.19 69.04 352.62 84.03 71.42 290.66 151.80 102.79 143.43 97.17 107.01 34.96 275.09 197.17 170.38 33 ER5a ExonRegion 0 105.48 25.90 161.85 73.00 83.57 186.44 69.49 91.58 111.73 66.78 390.06 99.72 135.97 377.23 216.28 156.56 145.89 126.90 108.41 51.42 337.70 235.06 239.40 34 E5a_E6a KnownJunction 0 120.17 34.86 119.33 60.17 85.91 194.66 39.04 87.98 105.15 68.28 349.51 81.78 196.42 296.25 224.61 149.36 127.35 132.24 83.11 46.98 294.86 223.93 249.09 35 ER6a ExonRegion 0 114.47 31.65 144.97 52.43 83.85 132.17 60.58 81.07 103.42 54.68 294.77 60.85 87.58 329.45 200.46 141.75 100.42 92.77 85.12 46.38 243.55 214.92 223.45 36 E6_Ab KnownBoundary 1 179.74 57.56 148.52 57.40 116.47 93.75 53.97 78.66 101.36 66.94 289.07 74.72 36.85 263.52 154.65 108.52 89.29 74.28 62.21 32.98 248.84 227.54 150.07 37 ER6b ExonRegion 0 285.35 69.20 173.12 71.44 140.72 150.02 93.13 113.40 118.57 71.77 324.39 113.97 101.60 297.26 262.63 126.89 102.21 87.19 85.38 46.67 249.04 236.67 197.68 38 E6_Da KnownBoundary 0 210.85 74.39 227.43 84.44 295.84 138.78 138.89 154.64 149.74 83.51 279.28 97.98 102.43 240.69 341.31 68.96 109.40 78.10 80.28 31.45 165.01 247.63 255.58 39 ER6c ExonRegion 0 223.72 41.90 124.13 61.23 117.45 77.30 63.45 81.55 81.64 42.00 191.93 63.06 46.02 147.28 160.60 60.24 59.24 32.09 48.54 25.94 101.30 189.93 108.41 40 ER6d ExonRegion 0 0.00 1.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.94