Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C16orf58 Gene 0 138.05 79.10 229.86 99.30 76.22 116.48 54.07 120.05 140.35 196.26 101.56 78.52 113.11 173.57 251.16 170.06 169.61 191.94 148.21 102.66 246.74 177.56 160.14 2 327237 Transcript 0 5.05 3.60 3.74 1.82 8.40 14.06 2.45 1.35 2.21 1.51 2.93 2.13 4.22 10.33 18.01 7.27 8.57 7.28 4.95 3.58 12.89 3.11 5.07 3 430477 Transcript 0 18.37 13.51 26.24 7.15 13.38 10.21 13.16 23.02 27.24 22.48 18.82 15.28 2.04 25.77 47.02 26.58 32.20 23.11 31.01 15.58 48.11 19.22 34.80 4 452223 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 436843 Transcript 0 80.49 39.96 118.08 76.08 47.89 51.69 32.80 47.72 64.79 88.87 40.21 22.60 18.25 51.24 66.31 57.90 50.53 52.37 56.61 35.25 63.33 69.93 60.61 6 ER1a ExonRegion 0 2.48 6.38 4.06 1.46 3.41 14.54 4.11 1.31 1.70 1.19 5.87 2.54 0.00 6.05 15.71 10.97 12.52 11.60 7.36 4.18 17.40 3.30 7.80 7 E1_Ac KnownBoundary 0 125.58 67.62 32.11 9.29 70.63 128.85 70.04 20.04 9.61 28.98 54.38 5.40 0.00 75.81 107.67 89.12 100.23 99.49 94.97 33.68 162.47 57.74 75.55 8 ER1b ExonRegion 1 72.31 48.13 27.88 9.43 43.93 88.33 45.79 16.28 10.60 27.53 44.46 4.33 0.00 53.33 88.97 60.43 85.55 67.90 67.69 20.74 116.80 42.02 52.86 9 ER1c ExonRegion 1 125.61 69.63 56.07 26.34 58.73 128.93 47.26 39.15 35.88 65.35 45.03 0.32 1.58 75.27 97.48 103.84 104.76 154.69 90.36 43.92 151.04 69.96 110.94 10 E1_Da KnownBoundary 0 9.85 5.66 29.51 11.52 7.56 4.66 4.37 24.93 14.70 18.67 11.95 0.00 6.49 13.95 13.35 0.00 13.18 16.29 8.28 2.62 15.14 7.96 10.76 11 E1a_E1d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER1d ExonRegion 1 21.29 17.60 75.59 20.59 10.36 16.44 6.45 45.21 51.96 89.23 61.16 11.46 15.55 78.61 101.38 41.91 111.68 49.04 50.78 51.55 171.06 49.28 53.47 13 E1_Ad KnownBoundary 1 23.86 36.31 133.82 65.06 50.00 53.61 20.05 88.23 96.50 117.49 50.33 54.77 19.15 153.10 270.23 190.80 83.87 255.56 144.29 77.28 110.21 105.81 237.14 14 ER1e ExonRegion 0 28.62 34.01 148.84 54.52 57.59 96.99 24.91 61.80 79.18 142.59 63.04 43.16 31.60 124.16 174.43 91.45 96.03 119.00 107.47 81.18 177.35 94.50 108.20 15 E1b_E2a KnownJunction 0 79.13 55.25 194.85 72.45 130.82 200.79 51.10 94.72 95.75 179.01 72.18 23.41 40.74 127.44 186.79 74.60 121.08 118.18 129.23 91.34 217.95 102.14 66.67 16 ER2a ExonRegion 0 63.42 100.90 266.53 135.00 58.17 121.76 59.75 105.92 126.43 205.65 84.54 46.98 62.32 161.52 260.61 135.01 171.96 144.19 126.22 108.47 256.26 192.52 122.45 17 E2a_E3a KnownJunction 0 177.29 206.74 328.76 150.06 63.50 70.75 35.07 152.92 174.07 242.21 135.88 66.77 122.39 206.31 434.89 146.03 249.46 232.68 153.51 131.67 388.09 196.56 145.29 18 ER3a ExonRegion 0 99.43 115.21 322.17 134.84 93.13 88.46 48.21 132.34 171.33 239.93 129.42 119.72 131.12 248.21 336.10 135.17 242.19 243.78 146.94 159.71 349.53 178.55 140.70 19 E3a_E4a KnownJunction 0 135.28 67.22 271.84 99.72 109.08 144.01 92.12 94.18 131.36 154.38 126.51 105.63 133.27 286.78 290.50 143.98 225.99 185.09 161.79 162.86 293.01 176.29 155.70 20 E3a_E6a NovelJunction 0 7.56 12.50 46.21 11.22 0.00 8.69 8.30 19.10 10.56 27.99 2.37 0.00 0.00 14.72 28.43 0.00 9.54 8.62 4.61 15.53 8.15 6.00 4.35 21 ER4a ExonRegion 0 129.75 55.46 336.35 152.68 123.81 142.93 77.27 134.35 209.22 246.45 146.14 136.84 159.32 275.36 316.59 175.63 256.67 270.05 167.28 170.60 388.32 199.39 151.90 22 E4a_E5a KnownJunction 0 165.21 67.82 292.89 168.24 126.83 128.16 58.12 125.15 195.17 224.54 146.35 116.44 153.07 270.76 360.22 211.31 218.89 245.24 173.46 166.44 398.83 195.89 135.81 23 ER5a ExonRegion 0 129.59 65.52 320.91 164.87 92.19 143.33 50.84 143.85 204.20 235.72 122.19 126.82 135.04 223.44 368.73 229.84 199.14 266.25 215.91 166.46 332.03 283.22 208.00 24 E5a_E6a KnownJunction 0 137.65 85.05 310.66 126.89 117.06 138.44 60.46 144.95 186.80 218.31 95.34 137.44 136.03 318.27 499.41 271.81 193.17 331.38 296.57 173.73 354.66 294.17 202.99 25 I5_AR2 ActiveIntronRegion 0 0.00 17.72 7.53 5.45 9.94 3.14 10.02 3.95 6.18 9.67 5.52 0.00 14.07 3.25 4.14 2.97 3.30 7.13 6.37 10.64 9.44 2.98 11.75 26 ER6a ExonRegion 0 69.12 72.77 315.52 98.45 65.08 108.81 47.77 145.07 160.77 225.82 119.65 112.06 151.05 245.82 336.63 163.87 228.60 195.64 159.80 141.03 353.33 190.19 156.53 27 E6a_E7a KnownJunction 1 86.46 78.21 274.38 120.50 76.49 73.71 61.87 149.88 155.12 247.34 92.08 194.91 201.93 203.78 300.76 195.76 208.88 202.42 166.40 157.04 349.72 183.33 189.42 28 ER7a ExonRegion 0 71.60 86.24 234.49 115.48 84.27 120.67 48.22 149.82 190.68 241.35 127.52 138.91 167.92 238.52 281.38 212.57 222.14 292.31 192.20 129.52 359.24 245.77 228.48 29 E7a_E8a KnownJunction 0 160.32 176.81 329.11 145.64 131.75 240.77 106.61 177.56 223.87 290.54 159.99 180.36 250.31 255.93 333.89 340.51 290.32 464.24 411.87 164.33 404.09 369.30 283.49 30 ER8a ExonRegion 0 110.36 92.12 251.38 94.52 81.36 168.99 72.57 131.99 160.89 222.03 137.85 82.07 167.37 226.59 304.91 234.52 246.46 270.82 193.26 121.09 326.53 208.06 224.36 31 E8_Da KnownBoundary 0 45.64 34.20 115.79 36.59 40.32 14.99 36.61 77.63 82.00 70.92 26.16 25.21 6.82 33.85 59.71 53.06 76.20 76.77 44.99 29.85 81.98 47.33 42.51 32 E8a_E9a KnownJunction 0 50.60 83.60 153.66 49.34 36.08 88.59 42.09 65.35 103.36 145.62 93.71 34.96 59.74 180.18 171.21 142.61 159.61 166.23 111.91 93.06 218.01 129.20 154.08 33 E8a_E10b NovelJunction 0 3.78 0.00 5.12 0.00 12.73 0.00 6.40 2.55 0.00 0.00 0.00 6.30 0.00 0.00 4.45 4.02 0.00 2.07 3.58 0.00 11.31 0.00 0.00 34 ER8b ExonRegion 0 18.37 13.51 26.24 7.15 13.38 10.21 13.16 23.02 27.24 22.48 18.82 15.28 2.04 25.77 47.02 26.58 32.20 23.11 31.01 15.58 48.11 19.22 34.80 35 E8_Db NovelBoundary 0 126.02 47.82 79.57 26.00 31.66 43.67 29.81 39.60 53.27 43.70 29.22 0.00 26.13 50.33 66.26 61.61 78.17 58.24 51.77 35.28 91.06 37.47 67.18 36 E9_Aa NovelBoundary 0 66.31 16.25 75.75 33.90 43.21 32.25 23.36 37.66 44.13 68.15 32.22 12.60 27.11 41.32 70.96 44.18 30.76 59.57 60.14 28.83 73.58 25.84 46.86 37 ER9a ExonRegion 0 61.12 61.36 120.47 39.92 50.19 104.68 46.25 64.76 74.85 126.77 100.44 90.55 79.49 184.25 167.47 143.12 157.13 124.98 77.88 68.82 218.59 113.55 141.01 38 E9_Da NovelBoundary 0 113.21 54.92 109.61 55.87 29.71 60.48 38.20 61.20 49.68 54.26 14.69 6.30 13.47 72.87 63.04 60.41 68.63 43.53 45.84 39.95 59.99 25.84 49.25 39 E9a_E10b KnownJunction 0 66.09 54.33 129.92 62.53 89.13 149.46 63.77 85.64 80.00 134.74 89.02 99.48 145.28 152.45 186.04 120.40 182.05 138.08 58.17 78.17 271.51 119.90 161.17 40 I9 Intron 0 42.49 22.62 71.83 20.39 32.66 37.31 26.22 30.87 34.45 35.24 18.35 10.85 7.56 35.51 37.36 29.83 21.49 32.89 37.17 24.24 37.66 23.74 31.87 41 I9_AR1 ActiveIntronRegion 0 42.90 22.86 72.59 20.60 33.02 37.71 26.49 31.19 34.82 35.62 18.54 10.96 7.64 35.88 37.76 30.12 21.72 33.21 37.57 24.50 38.06 23.97 32.16 42 E10_Aa NovelBoundary 0 111.13 41.51 126.31 103.62 76.66 27.14 59.27 87.41 96.79 128.00 36.17 30.31 13.15 71.05 92.71 117.58 72.93 92.19 71.53 48.83 64.68 139.98 87.58 43 ER10a ExonRegion 0 80.49 39.96 118.08 76.08 47.89 51.69 32.80 47.72 64.79 88.87 40.21 22.60 18.25 51.24 66.31 57.90 50.53 52.37 56.61 35.25 63.33 69.93 60.61 44 E10_Ab KnownBoundary 0 130.84 65.32 171.87 106.41 131.41 70.36 70.66 70.36 53.36 106.67 31.80 0.00 12.01 60.51 60.57 64.00 51.15 66.99 89.60 29.34 58.07 43.23 74.27 45 ER10b ExonRegion 0 163.43 100.28 295.17 129.47 146.97 168.11 88.54 133.34 162.91 219.16 98.11 83.13 81.07 226.24 236.66 222.53 183.58 181.50 142.07 108.45 288.56 186.89 206.40 46 E10a_E11a KnownJunction 0 250.27 150.96 323.55 138.64 190.07 209.88 81.70 132.79 197.19 225.59 94.76 100.53 71.10 268.23 230.05 226.95 161.57 239.56 162.55 119.84 281.89 200.23 206.58 47 ER11a ExonRegion 0 181.21 101.23 280.75 118.35 106.14 148.79 82.35 127.22 175.70 233.12 95.72 58.42 54.88 250.09 253.34 181.71 193.08 209.26 155.66 115.37 320.61 181.95 183.78 48 E11a_E12a KnownJunction 0 192.03 149.58 338.75 131.92 85.65 172.17 89.87 163.93 179.63 232.97 86.13 36.76 26.46 231.03 234.75 157.74 225.90 191.14 128.85 141.45 381.35 194.23 228.09 49 ER12a ExonRegion 0 185.49 134.92 354.82 148.45 119.21 177.15 85.99 183.48 218.22 301.28 149.20 62.56 65.12 306.00 351.57 216.24 273.85 246.70 205.25 158.07 382.26 242.57 255.86 50 E12a_E13a KnownJunction 0 243.52 141.22 443.83 170.34 175.89 260.65 167.20 219.91 254.68 368.12 149.67 71.87 100.81 352.88 362.94 213.79 235.90 269.49 257.70 165.55 350.46 234.16 215.80 51 ER13a ExonRegion 0 187.19 89.91 257.62 110.12 84.05 126.08 58.48 145.41 160.24 225.80 115.50 98.15 156.27 181.08 293.66 202.65 179.91 223.50 173.19 111.33 254.22 209.63 181.03 52 ER13b ExonRegion 0 7.62 0.81 3.43 2.18 13.38 13.57 0.79 1.38 2.72 1.84 0.00 1.73 8.44 14.62 20.31 3.57 4.62 2.96 2.55 2.98 8.37 2.92 2.35