Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ITGAX Gene 0 120.25 4.06 8.67 12.01 70.13 18.63 26.30 57.39 50.68 30.99 1.27 3.85 2.26 1.48 2.24 8.74 2.07 2.43 1.47 1.59 0.87 3.32 5.03 2 268296 Transcript 0 119.50 0.49 8.17 18.55 79.47 21.04 27.54 102.30 64.16 41.63 0.23 0.85 2.20 2.23 0.25 13.78 1.47 0.00 0.00 0.00 0.00 3.94 2.17 3 394880 Transcript 0 6.82 0.00 0.00 0.00 4.16 9.54 3.71 9.36 6.39 3.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 ER1a ExonRegion 0 86.19 1.00 1.79 2.01 29.61 13.49 10.91 11.67 15.05 4.57 0.00 0.00 0.99 0.56 1.00 4.60 0.00 0.00 0.00 0.00 1.08 1.04 2.88 5 E1a_E2a KnownJunction 0 9.71 0.00 0.00 0.00 4.33 0.00 0.00 4.07 9.06 1.58 0.00 0.00 7.63 0.00 0.00 3.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 ER2a ExonRegion 0 14.00 0.00 1.47 2.80 1.97 0.88 0.51 15.39 22.22 9.45 0.00 3.27 3.19 0.00 0.57 4.91 0.00 0.00 0.00 0.00 1.06 2.02 0.89 7 E2a_E3a KnownJunction 0 17.56 0.00 5.38 5.59 0.00 0.00 4.11 38.49 34.98 16.63 0.00 0.00 6.33 0.00 0.00 12.13 0.00 0.00 0.00 0.00 0.00 6.18 4.27 8 ER3a ExonRegion 0 6.33 0.00 3.06 2.20 14.33 4.64 4.47 18.76 21.45 15.63 0.95 0.96 0.36 1.12 0.42 6.23 1.62 0.00 0.00 0.00 1.08 2.22 3.42 9 E3a_E4a KnownJunction 0 7.41 0.00 1.54 1.27 68.17 8.18 6.58 13.39 17.01 10.05 0.00 6.30 5.68 0.00 0.00 7.09 0.00 0.00 0.00 0.00 0.00 5.45 0.00 10 ER4a ExonRegion 0 9.12 0.00 2.28 2.73 60.19 15.16 11.32 21.03 26.46 16.43 1.01 5.79 7.40 0.69 0.00 4.23 0.00 0.00 0.00 0.00 0.12 1.64 0.00 11 E4a_E5a KnownJunction 0 16.67 0.00 3.64 4.00 28.78 14.08 15.59 31.67 29.43 23.77 2.37 6.30 19.97 2.12 0.00 8.54 0.00 0.00 0.00 0.00 0.00 2.88 0.00 12 ER5a ExonRegion 0 33.05 0.00 3.15 3.26 20.52 6.09 12.67 25.17 28.15 18.81 1.12 6.96 2.35 0.84 0.00 4.11 1.50 0.00 0.00 0.00 0.92 3.20 0.00 13 E5a_E6a KnownJunction 0 30.23 0.00 1.77 3.30 19.95 16.01 6.27 32.45 39.64 15.61 0.00 0.00 0.00 2.77 0.00 3.16 0.00 0.00 0.00 0.00 0.00 9.06 0.00 14 Ix_AR2 ActiveIntronRegion 0 9.33 1.71 2.19 0.00 10.62 2.30 6.17 4.59 15.76 4.18 0.00 1.30 0.00 0.00 1.23 1.78 0.00 0.00 0.00 0.00 0.00 1.29 0.00 15 ER6a ExonRegion 0 56.97 0.00 5.49 8.39 33.78 7.17 12.90 40.66 49.67 26.99 0.75 7.20 3.40 1.14 0.60 13.16 2.32 0.00 0.00 0.00 0.00 2.78 1.95 16 E6a_E7a KnownJunction 0 90.83 0.00 5.59 8.66 37.27 5.22 29.46 26.86 41.75 27.99 0.00 18.31 5.84 2.41 4.45 3.67 13.93 0.00 0.00 0.00 0.00 0.00 3.93 17 ER7a ExonRegion 0 59.86 1.42 5.06 9.66 46.07 14.02 25.58 48.75 47.86 28.85 0.68 10.08 3.63 1.75 1.19 10.40 2.87 0.00 0.00 0.00 0.00 2.83 2.57 18 E7_Da NovelBoundary 0 3.26 0.00 2.37 0.00 7.47 18.63 1.90 4.31 10.53 0.00 0.00 0.00 0.00 0.00 0.00 3.67 0.00 0.00 0.00 0.00 0.00 0.00 4.27 19 E7a_E8a KnownJunction 0 17.04 0.00 5.38 10.49 19.10 2.10 26.41 41.69 40.88 16.25 0.00 0.00 0.00 4.83 0.00 15.12 4.30 0.00 0.00 0.00 0.00 0.00 12.55 20 ER8a ExonRegion 0 36.26 0.00 3.73 6.43 38.56 12.25 19.95 34.70 35.31 17.23 1.28 3.63 1.28 0.84 0.00 6.29 1.82 0.00 0.00 0.00 0.00 3.02 2.71 21 E8_Da NovelBoundary 0 48.90 9.41 7.33 17.85 73.68 7.21 7.86 51.38 57.15 21.68 2.68 0.00 0.00 0.00 0.00 0.00 4.30 0.00 0.00 0.00 0.00 3.12 12.12 22 E8a_E9a KnownJunction 0 0.00 0.00 1.83 1.73 4.16 6.64 4.24 10.43 15.62 6.90 2.42 0.00 0.00 0.00 0.00 4.10 0.00 0.00 0.00 0.00 0.00 3.12 0.00 23 Ix Intron 0 49.64 0.96 1.72 5.75 40.43 10.39 21.05 23.52 18.83 8.34 0.00 1.60 2.43 0.99 0.64 4.68 1.04 0.00 0.00 0.00 0.00 0.98 0.46 24 Ix_AR1 ActiveIntronRegion 0 49.93 0.97 1.73 5.79 40.68 10.46 21.17 23.66 18.94 8.39 0.00 1.61 2.45 1.00 0.65 4.70 1.05 0.00 0.00 0.00 0.00 0.99 0.47 25 E9_Aa NovelBoundary 0 78.38 2.96 8.37 12.52 45.93 12.95 37.23 27.19 44.73 12.63 0.00 0.00 0.00 2.59 4.45 8.03 4.11 0.00 0.00 0.00 0.00 2.51 0.00 26 ER9a ExonRegion 0 69.62 1.37 4.03 12.51 60.02 10.81 27.97 42.87 47.20 12.55 0.00 5.07 3.42 0.86 0.98 6.53 1.16 0.00 0.00 0.00 0.00 3.31 5.93 27 E9_Da NovelBoundary 0 6.22 0.00 5.14 5.19 34.38 2.84 1.77 7.06 7.18 2.69 0.00 6.45 6.82 2.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.94 0.00 28 E9a_E10a KnownJunction 0 84.61 0.00 4.91 10.39 46.10 13.80 26.32 73.89 47.89 15.37 0.00 0.00 5.84 2.24 0.00 15.30 0.00 0.00 0.00 0.00 0.00 7.90 11.69 29 ER10a ExonRegion 0 42.90 0.00 2.29 4.81 23.79 29.51 17.50 43.28 44.85 20.92 0.00 6.49 1.20 1.14 0.00 14.38 2.27 0.00 0.00 0.00 0.00 2.76 4.09 30 E10a_E11a KnownJunction 0 16.89 0.00 1.42 0.00 16.21 41.57 30.30 44.48 51.45 22.08 0.00 6.30 0.00 2.47 0.00 20.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 ER11a ExonRegion 0 44.56 2.82 5.90 5.79 42.67 17.00 17.06 48.21 44.12 18.92 0.00 3.30 3.03 0.37 0.80 7.77 0.00 0.00 0.00 0.00 0.00 0.74 8.86 32 E11a_E12a KnownJunction 0 45.56 3.09 4.91 7.89 26.83 7.95 15.19 27.48 31.22 20.17 0.00 0.00 0.00 0.00 0.00 12.82 0.00 0.00 0.00 0.00 0.00 2.76 0.00 33 ER12a ExonRegion 0 49.01 0.34 2.89 3.40 28.91 11.73 15.38 27.14 30.23 20.99 0.00 1.27 0.98 0.95 0.73 4.39 1.18 0.00 0.00 0.00 0.00 0.83 2.90 34 E12a_E13a KnownJunction 0 44.38 0.00 6.39 3.10 30.39 5.28 12.90 25.59 23.09 33.09 0.00 0.00 6.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.25 4.35 35 ER13a ExonRegion 0 39.90 0.00 1.01 2.95 16.60 9.23 7.46 20.93 20.72 18.25 0.00 1.23 0.40 0.00 0.74 2.85 0.00 0.00 0.00 0.00 0.00 1.49 1.35 36 E13a_E14a KnownJunction 0 44.45 0.00 0.00 3.80 23.43 7.55 7.95 28.05 34.69 32.40 2.68 0.00 0.00 0.00 0.00 4.19 0.00 0.00 0.00 0.00 3.09 0.00 3.84 37 ER14a ExonRegion 0 38.25 0.49 2.24 3.97 20.32 4.87 11.00 29.38 28.20 26.83 0.47 0.91 0.00 0.32 0.00 3.86 1.30 0.00 0.00 0.00 0.54 1.52 0.20 38 E14a_E15a KnownJunction 0 34.90 0.00 0.00 0.00 18.59 2.61 14.93 36.10 29.46 19.26 0.00 0.00 0.00 0.00 0.00 3.76 4.68 0.00 0.00 0.00 0.00 0.00 0.00 39 Ix Intron 0 27.54 1.74 1.39 1.74 14.48 1.22 8.93 1.96 2.10 1.30 0.00 0.00 0.00 0.00 0.19 1.41 0.31 0.00 0.00 0.00 0.00 0.20 0.84 40 Ix_SR1 SilentIntronRegion 0 27.59 1.74 1.39 1.74 14.51 1.22 8.94 1.96 2.10 1.30 0.00 0.00 0.00 0.00 0.19 1.41 0.31 0.00 0.00 0.00 0.00 0.20 0.84 41 ER15a ExonRegion 0 36.77 0.87 3.98 4.00 22.41 5.01 13.11 36.21 36.18 17.83 0.00 0.00 1.50 1.17 0.11 3.56 0.66 0.00 0.00 0.00 0.00 1.62 0.00 42 E15a_E16a KnownJunction 0 22.74 0.00 1.69 1.40 19.61 2.67 7.68 35.45 26.59 21.95 0.00 0.00 0.00 2.41 0.00 0.00 3.55 0.00 0.00 0.00 0.00 0.00 0.00 43 E16_Aa NovelBoundary 0 13.56 0.00 0.00 2.03 0.00 0.00 4.50 11.01 20.51 13.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 ER16a ExonRegion 0 62.44 1.20 6.61 2.61 42.45 16.27 15.77 39.42 45.00 24.44 0.00 0.00 0.14 1.52 0.55 6.40 1.91 0.00 0.00 0.00 0.00 1.94 2.58 45 E16_Da NovelBoundary 0 37.04 0.00 3.61 1.33 25.55 2.90 7.73 36.72 26.97 20.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 46 E16a_E17a KnownJunction 0 82.46 2.43 9.58 6.06 38.79 19.25 33.48 43.21 41.09 31.64 0.00 0.00 0.00 2.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.41 47 I16 Intron 0 34.35 0.00 0.71 1.57 5.17 0.71 5.12 12.94 4.98 3.96 0.00 0.00 0.00 0.00 0.92 2.30 1.28 0.00 0.00 0.00 0.00 0.00 0.00 48 I16_AR1 ActiveIntronRegion 0 34.86 0.00 0.72 1.59 5.23 0.72 5.18 13.12 5.05 4.02 0.00 0.00 0.00 0.00 0.94 2.33 1.29 0.00 0.00 0.00 0.00 0.00 0.00 49 E17_Aa NovelBoundary 0 33.71 0.00 5.29 1.66 14.35 2.21 8.08 31.46 24.68 4.19 0.00 0.00 0.00 0.00 0.00 3.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50 ER17a ExonRegion 0 94.60 2.56 11.73 4.81 53.07 11.85 20.71 55.13 65.67 31.12 0.64 3.18 1.12 0.79 1.14 7.94 0.00 0.00 0.00 0.00 0.00 1.04 3.66 51 E17a_E18a KnownJunction 0 184.40 9.74 11.92 9.62 80.14 7.78 20.89 86.26 80.18 34.41 0.00 12.60 0.00 0.00 5.19 16.15 0.00 0.00 0.00 0.00 0.00 3.12 4.35 52 ER18a ExonRegion 0 87.55 1.71 7.16 9.78 54.20 17.46 23.00 54.81 65.10 29.84 1.04 4.40 0.00 1.93 0.90 9.59 1.30 0.00 0.00 0.00 0.00 1.64 6.94 53 E18a_E19a KnownJunction 0 102.91 0.00 8.19 14.05 113.33 28.11 47.39 63.79 85.97 39.54 2.68 0.00 0.00 0.00 4.94 4.36 0.00 0.00 0.00 0.00 0.00 3.12 11.61 54 ER19a ExonRegion 0 105.17 0.00 10.58 11.82 94.30 25.47 39.40 81.17 68.98 33.86 0.81 0.23 0.82 1.16 1.65 9.92 1.70 0.00 0.00 0.00 0.00 1.24 5.08 55 E19a_E20a KnownJunction 0 121.80 0.00 9.99 15.62 110.53 21.46 28.35 118.05 63.57 31.62 0.00 0.00 5.84 4.83 0.00 12.73 4.11 0.00 0.00 0.00 0.00 3.12 3.67 56 E19a_E21a KnownJunction 0 6.82 0.00 0.00 0.00 4.16 9.54 3.71 9.36 6.39 3.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 57 ER20a ExonRegion 0 96.24 1.46 6.22 21.79 59.11 27.00 23.30 86.91 67.52 44.38 0.69 2.56 0.76 1.86 0.74 7.85 0.30 0.00 0.00 0.00 0.00 3.24 2.85 58 E20a_E21a KnownJunction 0 140.47 0.00 8.31 18.25 68.76 14.65 30.96 101.95 61.40 48.89 0.00 0.00 0.00 0.00 0.00 20.76 0.00 0.00 0.00 0.00 0.00 5.45 0.00 59 ER21a ExonRegion 0 114.24 5.72 11.90 22.38 61.91 22.30 30.17 91.03 64.90 44.53 0.00 4.66 1.44 1.53 0.05 10.36 0.00 0.00 0.00 0.00 0.00 7.05 2.64 60 E21a_E22a KnownJunction 0 177.44 8.75 10.76 21.24 74.96 14.08 56.22 85.35 75.84 44.94 0.00 0.00 0.00 2.47 0.00 19.82 4.49 0.00 0.00 0.00 0.00 13.59 0.00 61 ER22a ExonRegion 0 98.84 3.30 6.16 13.95 41.78 19.48 35.65 68.19 72.53 32.34 0.00 0.00 0.00 0.32 3.08 6.50 0.00 0.00 0.00 0.00 0.00 7.81 0.00 62 E22a_E23a KnownJunction 0 217.08 0.00 8.31 24.37 77.93 46.22 44.96 85.31 80.93 52.46 0.00 0.00 0.00 0.00 0.00 19.91 0.00 0.00 0.00 0.00 0.00 8.27 0.00 63 ER23a ExonRegion 0 148.89 3.27 9.34 15.87 78.97 30.43 30.21 83.67 70.52 44.32 0.41 2.16 2.35 0.97 0.35 10.93 1.93 0.00 0.00 0.00 0.00 2.63 0.00 64 E23a_E24a KnownJunction 0 217.67 9.80 8.63 16.55 62.56 32.14 49.86 98.45 69.01 42.01 2.58 0.00 0.00 2.12 4.45 11.62 0.00 0.00 0.00 0.00 0.00 3.12 0.00 65 ER24a ExonRegion 0 227.99 5.71 7.23 23.76 110.59 30.01 48.20 84.23 73.25 51.89 0.81 1.04 0.36 2.14 4.11 15.91 0.08 0.00 0.00 0.00 0.00 7.44 1.90 66 E24a_E25a KnownJunction 0 244.34 0.00 6.53 29.70 115.79 20.73 45.09 105.19 63.37 43.38 0.00 6.30 0.00 4.94 0.00 20.17 0.00 0.00 0.00 0.00 0.00 6.25 0.00 67 ER25a ExonRegion 0 217.26 5.76 17.51 20.73 123.93 29.61 37.01 87.21 78.96 47.28 1.83 4.29 1.56 1.04 2.15 13.26 0.00 0.00 0.00 0.00 1.04 3.47 6.12 68 E25a_E26a KnownJunction 0 207.96 5.92 17.03 34.99 168.42 43.04 66.95 92.91 95.86 47.89 0.00 0.00 0.00 2.47 4.45 6.92 0.00 0.00 0.00 0.00 0.00 5.45 4.18 69 E26_Aa NovelBoundary 0 84.61 2.50 6.71 17.68 45.08 19.42 23.36 37.38 31.89 17.35 0.00 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 0.00 0.00 4.65 0.00 70 ER26a ExonRegion 0 225.86 4.53 13.95 30.65 141.21 39.54 45.53 87.88 85.63 51.91 0.16 2.16 3.41 1.86 2.11 15.39 0.00 0.00 0.00 0.00 1.26 4.61 2.97 71 E26a_E27a KnownJunction 0 389.18 3.16 15.97 20.58 121.22 20.56 47.47 103.84 91.90 72.07 0.00 0.00 6.82 0.00 0.00 23.16 0.00 0.00 0.00 0.00 0.00 5.08 4.18 72 ER27a ExonRegion 0 171.20 6.08 15.32 23.28 127.38 21.72 43.40 106.66 75.35 56.88 0.75 1.60 2.67 1.14 1.93 8.60 0.00 0.00 0.00 0.00 0.06 3.56 6.47 73 E27a_E28a KnownJunction 0 187.81 5.99 11.18 24.74 142.02 18.51 45.05 129.59 71.44 56.36 0.00 0.00 0.00 0.00 0.00 8.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 74 ER28a ExonRegion 0 163.82 5.34 13.71 21.86 115.87 40.47 29.22 113.82 83.61 52.76 0.00 0.13 1.98 0.81 2.05 14.28 0.00 0.00 0.00 0.00 0.00 3.88 1.47 75 E28a_E29a KnownJunction 0 486.98 3.35 22.12 31.36 141.85 32.42 64.12 215.84 131.42 82.25 0.00 6.45 0.00 0.00 0.00 16.66 0.00 0.00 0.00 0.00 0.00 2.76 0.00 76 ER29a ExonRegion 0 294.65 2.53 17.64 21.17 92.71 18.26 28.63 131.92 99.30 60.36 0.00 5.85 4.31 1.52 2.88 9.29 2.02 0.00 0.00 0.00 0.00 1.52 4.05 77 E29a_E30a KnownJunction 0 261.97 3.09 16.47 14.62 52.63 2.44 46.28 106.63 90.74 48.06 0.00 6.00 13.15 2.47 8.90 7.86 8.60 0.00 0.00 0.00 0.00 2.88 0.00 78 ER30a ExonRegion 0 214.02 10.48 14.31 17.04 118.81 25.55 40.32 67.47 51.55 35.67 3.63 6.12 3.73 2.79 5.93 11.00 5.31 9.45 5.71 6.18 2.73 5.22 11.03