Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GOT2 Gene 0 62.01 193.96 193.46 77.01 97.96 101.85 137.57 90.40 99.44 108.24 406.21 171.25 120.39 331.43 214.98 236.58 262.17 257.32 157.08 226.42 112.13 85.00 87.19 2 492378 Transcript 0 18.47 34.71 9.26 6.82 20.28 28.69 30.76 6.72 6.61 8.99 18.39 6.70 9.21 43.27 27.72 36.04 24.10 25.48 26.99 25.69 13.00 17.65 24.56 3 496461 Transcript 0 14.81 30.31 19.03 15.00 18.62 15.91 30.36 15.02 21.38 16.00 30.96 23.02 14.28 33.03 16.39 43.82 43.46 36.52 22.96 25.26 7.28 13.67 13.09 4 245206 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.06 0.00 0.00 0.00 5 434819 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.95 0.00 0.00 2.65 13.60 10.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 425685 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 494627 Transcript 0 7.82 23.94 12.86 7.60 14.11 5.77 15.62 13.88 8.12 4.83 11.21 14.51 14.75 11.40 14.83 17.31 14.22 17.20 13.92 15.70 4.21 3.66 8.91 8 ER1a ExonRegion 0 16.93 45.22 9.62 3.09 17.86 47.57 28.97 0.81 0.91 4.82 29.85 0.00 0.00 75.76 35.84 45.37 24.37 27.50 31.85 20.02 12.19 25.25 32.04 9 E1_Ab KnownBoundary 0 31.93 54.00 1.83 1.50 37.52 70.24 36.04 2.22 3.39 0.00 20.01 5.25 0.00 117.72 47.84 48.53 21.97 11.81 32.85 22.05 20.82 23.88 49.08 10 E1_Ac KnownBoundary 1 170.62 383.02 81.34 24.97 135.74 319.53 330.20 18.98 21.85 42.84 283.55 5.85 12.99 851.50 313.37 432.37 275.83 311.52 260.81 201.28 66.72 165.09 206.15 11 ER1b ExonRegion 1 96.78 239.69 46.84 9.48 87.21 224.97 203.65 6.84 10.95 32.37 192.50 1.77 6.18 620.64 233.42 276.00 191.75 131.95 168.53 127.76 48.18 119.42 134.69 12 ER1c ExonRegion 1 98.17 219.47 76.56 17.69 65.97 201.33 180.82 14.46 23.18 51.96 176.30 8.16 14.07 434.61 153.93 201.19 206.88 153.72 154.55 145.01 41.74 83.06 77.54 13 E1_Ad KnownBoundary 0 65.79 137.54 72.88 24.41 28.86 81.60 52.73 25.10 31.97 39.25 65.12 28.81 26.13 49.44 63.04 39.82 65.45 93.73 26.17 62.96 22.18 8.63 12.72 14 ER1d ExonRegion 0 43.77 88.83 76.14 14.09 28.61 41.57 35.63 27.32 31.10 38.43 166.10 29.03 20.36 110.70 68.15 63.16 127.57 80.17 27.33 100.39 43.17 19.86 18.82 15 E1a_E2a KnownJunction 1 21.11 56.57 114.69 35.33 26.99 23.34 26.50 43.74 72.63 81.85 410.21 74.27 45.78 267.94 94.20 91.17 300.23 134.23 69.46 195.59 109.47 49.66 28.08 16 ER2a ExonRegion 1 27.10 187.92 240.09 87.61 111.99 121.16 138.03 115.92 124.12 145.52 582.13 127.13 72.20 623.42 283.77 314.70 327.02 388.82 177.37 340.48 147.56 124.88 120.33 17 E2a_E3a KnownJunction 0 24.67 320.80 334.46 95.93 239.22 429.41 381.79 186.60 165.59 207.08 630.84 245.18 122.23 577.79 304.47 254.55 383.26 488.74 168.66 423.52 184.47 99.63 105.68 18 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.95 0.00 0.00 2.65 13.60 10.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 ER3a ExonRegion 0 42.75 417.13 406.95 158.04 186.66 254.07 320.91 211.29 228.66 258.45 1005.06 296.89 195.17 726.61 334.69 729.84 607.32 770.12 400.17 471.01 276.61 233.22 226.24 20 E3_Da KnownBoundary 0 105.28 480.64 600.51 253.08 185.74 199.15 274.78 276.39 302.17 358.04 1391.46 296.65 238.46 817.89 347.12 914.97 843.01 818.87 766.33 563.94 371.96 318.84 309.19 21 E3a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER3b ExonRegion 0 65.57 354.90 515.00 208.85 124.03 133.19 178.78 262.82 308.37 343.82 1511.63 358.78 218.35 835.94 432.18 619.58 854.26 639.08 487.24 530.26 372.67 253.38 216.44 23 E3_Db KnownBoundary 0 3.78 0.00 4.58 6.19 0.00 0.00 10.86 3.78 9.20 1.16 2.68 0.00 0.00 2.30 18.67 3.33 4.77 18.65 8.47 15.72 0.00 5.51 7.77 24 E3b_E4a KnownJunction 0 72.53 324.68 478.10 163.95 169.61 145.65 164.59 272.07 308.21 336.61 1238.31 457.80 274.17 850.91 506.46 539.43 793.17 481.77 394.36 570.72 368.75 249.47 151.26 25 ER3c ExonRegion 0 20.01 24.21 8.90 10.56 22.69 9.82 32.55 12.63 12.30 13.15 6.93 13.39 18.42 10.78 19.60 26.70 23.84 23.46 22.13 31.35 13.81 10.06 17.08 26 E3_Dc NovelBoundary 1 3.19 20.85 1.83 11.89 3.57 13.00 33.25 10.02 12.53 7.23 14.06 20.11 55.68 0.00 4.45 4.36 0.00 2.45 4.42 30.04 0.00 11.02 0.00 27 I3_SR1 SilentIntronRegion 0 16.68 15.62 13.78 12.72 12.62 6.55 18.91 12.32 6.94 7.02 7.94 10.64 17.47 6.33 10.08 13.22 10.23 13.94 10.30 21.50 2.82 5.76 5.54 28 ER4a ExonRegion 0 87.06 326.05 496.11 172.00 194.04 151.47 189.70 281.88 280.76 332.89 1265.66 548.25 335.65 999.24 495.05 534.93 860.60 639.48 346.14 593.22 369.78 227.97 179.09 29 E4a_E5a KnownJunction 0 145.51 470.84 643.06 261.04 295.59 225.84 302.78 345.19 351.94 409.83 1307.38 632.61 426.11 1188.07 581.37 696.65 921.46 1061.37 439.82 596.67 368.63 309.66 228.18 30 ER5a ExonRegion 0 108.79 389.63 618.32 251.59 263.83 191.45 249.43 309.39 358.43 394.08 1273.39 599.20 425.85 1055.68 532.09 693.10 879.36 1092.39 394.35 589.36 371.10 278.77 206.74 31 ER5b ExonRegion 0 142.02 445.30 517.60 210.80 270.35 232.04 320.27 287.32 312.92 353.27 1373.75 478.81 316.65 1000.67 527.05 837.78 894.88 793.58 521.16 629.96 363.84 276.92 268.08 32 E5_Da KnownBoundary 0 12.52 36.97 17.59 11.19 23.51 0.00 25.79 20.62 23.00 20.09 33.38 19.81 19.80 21.72 18.79 17.43 42.17 36.35 8.28 33.36 8.03 10.47 12.12 33 E5a_E5c KnownJunction 0 154.25 667.32 465.60 223.41 251.87 218.62 413.67 273.51 289.64 348.88 1290.54 682.72 498.83 1226.03 736.64 688.11 769.99 485.17 495.83 653.11 352.01 283.57 202.65 34 ER5c ExonRegion 0 14.81 30.31 19.03 15.00 18.62 15.91 30.36 15.02 21.38 16.00 30.96 23.02 14.28 33.03 16.39 43.82 43.46 36.52 22.96 25.26 7.28 13.67 13.09 35 E5_Ac KnownBoundary 0 13.34 41.51 15.82 16.28 15.62 13.57 22.61 15.28 20.14 14.96 7.21 11.55 5.84 26.43 13.35 27.34 48.81 17.45 17.60 27.04 7.60 13.66 15.45 36 ER5d ExonRegion 0 103.84 482.60 455.81 206.91 248.14 253.57 348.28 253.06 280.70 332.04 1210.51 500.44 395.38 1035.58 573.29 625.22 753.20 581.46 366.39 654.14 326.81 221.53 205.39 37 E5_Db NovelBoundary 0 94.46 318.04 384.26 149.50 242.61 182.11 311.52 182.98 205.35 220.03 779.09 285.99 194.95 632.24 369.37 435.10 525.95 419.47 213.75 525.34 219.62 134.22 127.70 38 E5c_E6a KnownJunction 0 199.59 642.91 499.86 203.54 389.90 362.18 349.24 238.27 271.99 334.67 1290.75 692.03 497.37 1127.15 576.55 705.20 832.91 721.87 302.31 807.34 345.83 241.32 280.67 39 E5c_E8a NovelJunction 0 0.00 0.00 5.26 4.13 0.00 0.00 0.00 0.00 6.39 0.00 2.68 0.00 0.00 7.53 0.00 3.93 0.00 1.91 17.98 8.31 0.00 0.00 7.85 40 ER5e ExonRegion 0 136.57 472.95 466.17 188.92 308.35 273.41 311.70 236.72 259.61 299.67 1204.84 581.39 398.43 1015.85 497.77 643.11 755.59 694.84 273.64 707.90 317.54 204.28 238.57 41 I5_AR3 ActiveIntronRegion 0 5.21 3.13 14.17 10.46 6.00 2.13 9.12 20.51 6.14 2.63 5.43 3.28 4.31 7.42 1.49 30.44 18.11 26.87 12.48 23.29 2.08 1.80 7.30 42 ER6a ExonRegion 0 108.42 512.54 576.79 275.15 253.70 259.39 321.39 290.80 299.99 369.79 1468.58 524.98 362.59 1037.47 665.92 718.23 789.15 865.79 531.83 765.63 353.57 307.71 276.96 43 E6a_E7b KnownJunction 1 215.52 673.76 708.22 234.34 372.33 201.36 484.46 283.94 308.82 335.88 1614.88 582.64 401.11 897.59 597.81 492.78 1107.34 582.17 309.00 716.00 483.84 177.33 154.59 44 ER7a ExonRegion 0 6.09 20.90 17.27 9.81 15.05 4.14 21.82 20.20 8.48 5.23 17.32 15.71 19.40 11.35 10.36 22.14 16.75 26.84 15.48 18.62 4.10 3.65 9.17 45 E7_Ab KnownBoundary 0 13.78 12.30 14.78 9.92 24.02 0.00 28.48 18.28 10.50 5.32 11.69 6.30 26.78 9.59 11.87 40.50 29.27 37.89 18.54 26.59 3.15 5.76 8.11 46 ER7b ExonRegion 0 201.85 643.09 762.40 310.70 327.88 283.41 416.24 312.77 336.33 355.23 1322.08 712.05 528.55 1043.30 732.89 818.43 851.35 936.26 557.77 775.07 364.05 289.08 322.96 47 E7a_E8a KnownJunction 0 203.74 512.80 577.03 209.56 338.88 336.57 417.78 234.78 247.36 263.86 958.61 738.54 400.14 847.14 514.99 463.90 667.41 529.19 406.22 660.46 307.16 202.32 219.90 48 ER8a ExonRegion 0 191.58 565.67 590.92 214.27 328.43 315.28 419.22 193.25 234.38 252.87 983.54 589.61 401.17 874.70 734.23 585.73 673.51 620.64 354.78 619.81 307.89 193.39 216.48 49 E8_Da KnownBoundary 0 3.78 37.49 32.29 5.16 4.33 16.30 25.53 11.21 11.34 4.19 6.32 18.91 0.00 11.48 5.32 10.42 17.02 10.57 0.00 17.71 8.71 8.51 8.45 50 E8a_E9a KnownJunction 0 266.79 687.64 636.97 217.45 438.12 437.65 619.51 246.57 289.52 317.08 1055.53 545.88 350.63 875.57 783.36 507.64 721.36 592.66 449.99 672.66 352.93 151.80 222.80 51 ER8b ExonRegion 0 9.55 26.98 8.46 5.40 13.17 7.39 9.43 7.56 7.76 4.44 5.09 13.31 10.11 11.45 19.31 12.48 11.70 7.57 12.37 12.79 4.33 3.67 8.64 52 E8_Db NovelBoundary 0 82.83 68.28 173.62 183.59 101.87 77.63 106.52 144.42 112.59 127.16 14.64 25.96 27.60 13.66 64.03 102.71 49.18 185.67 36.90 66.35 28.54 30.49 80.07 53 I8 Intron 0 14.23 17.57 15.39 6.93 7.71 4.11 6.92 13.74 8.64 2.37 5.16 7.04 10.66 6.11 7.78 6.66 5.63 5.69 3.40 11.12 1.41 2.45 2.82 54 I8_SR1 SilentIntronRegion 0 10.92 11.22 13.22 8.15 5.69 1.67 6.27 23.64 7.81 1.66 8.49 15.46 6.87 3.28 7.46 5.41 10.79 3.13 0.00 8.02 1.18 2.72 2.36 55 I8_AR1 ActiveIntronRegion 0 14.70 18.46 15.71 6.79 8.00 4.44 7.03 12.46 8.77 2.47 4.72 5.93 11.18 6.50 7.84 6.84 4.96 6.05 3.86 11.56 1.44 2.42 2.89 56 ER9a ExonRegion 0 62.91 151.89 117.77 38.92 61.87 82.95 113.16 48.10 57.13 52.11 185.08 91.01 63.97 158.90 140.37 109.64 125.19 131.20 84.23 117.50 53.63 36.99 41.93 57 ER9b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.06 0.00 0.00 0.00