Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NDRG4 Gene 0 44.57 215.37 328.06 151.28 235.91 752.34 193.87 428.42 965.97 234.33 0.85 2.33 0.79 1.42 1.80 4.84 17.12 518.58 361.34 294.53 36.85 36.18 32.34 2 258187 Transcript 0 4.62 8.15 13.44 3.02 13.45 215.24 22.39 6.26 25.44 6.39 0.00 0.00 0.00 0.00 0.00 0.00 3.11 88.28 98.72 23.69 0.00 1.82 6.26 3 421602 Transcript 0 0.00 0.45 1.21 0.00 1.79 10.91 1.24 1.15 4.69 0.48 0.00 0.00 0.00 0.00 0.00 0.00 0.99 5.63 6.50 2.30 0.00 0.00 0.00 4 394282 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 394279 Transcript 0 0.00 0.25 1.33 0.00 0.00 3.95 0.80 1.25 1.56 0.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.67 1.55 0.51 0.00 0.00 0.35 6 356752 Transcript 0 1.25 6.23 28.36 12.56 2.84 45.96 7.44 40.04 120.20 42.48 0.00 0.00 0.00 0.00 0.00 0.00 0.94 63.07 81.99 91.75 10.91 6.68 2.46 7 358584 Transcript 0 0.00 1.43 0.08 0.34 1.91 3.85 1.69 0.05 0.82 0.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.99 1.56 0.06 1.52 0.00 0.00 8 219312 Transcript 0 0.13 2.52 0.89 1.99 3.78 16.06 0.21 18.06 37.58 5.61 0.03 0.00 0.00 0.08 0.05 0.00 0.00 27.46 0.27 5.40 4.78 2.62 0.00 9 IG37_SR2 SilentIntergenicRegion 0 0.22 1.03 1.64 0.47 0.66 1.26 0.53 0.37 0.62 0.33 0.14 0.16 0.17 0.11 0.16 0.27 26.22 1.74 1.23 0.43 0.04 0.02 0.08 10 ER1a ExonRegion 0 5.97 8.01 9.70 1.25 19.26 232.07 30.34 5.01 12.71 3.11 0.00 0.00 0.00 0.00 0.00 0.00 2.20 53.99 87.80 14.07 0.00 0.76 4.50 11 E1a_E4a KnownJunction 0 3.26 8.29 17.18 4.79 7.64 198.41 14.44 7.52 38.17 9.67 0.00 0.00 0.00 0.00 0.00 0.00 4.02 122.58 109.65 33.30 0.00 2.88 8.02 12 ER2a ExonRegion 0 0.00 0.45 1.21 0.00 1.79 10.91 1.24 1.15 4.69 0.48 0.00 0.00 0.00 0.00 0.00 0.00 0.99 5.63 6.50 2.30 0.00 0.00 0.00 13 E2_Ab KnownBoundary 0 0.00 0.00 4.58 0.00 0.00 49.29 3.89 1.89 7.75 1.34 0.00 0.00 0.00 0.00 0.00 0.00 4.49 12.27 0.00 2.49 0.00 0.00 0.00 14 ER2b ExonRegion 0 0.72 3.02 3.03 0.12 3.66 58.00 2.46 2.66 4.87 0.79 0.00 0.00 0.00 0.00 0.00 0.00 3.21 28.19 17.57 3.74 0.00 0.00 0.00 15 E2a_E4a KnownJunction 0 0.00 3.16 5.68 3.23 0.00 15.79 6.40 7.89 13.54 1.61 0.00 0.00 0.00 0.00 0.00 0.00 8.70 48.91 8.94 6.52 0.00 0.00 0.00 16 ER3a ExonRegion 0 0.00 0.49 2.67 0.00 0.00 5.47 1.60 2.49 3.11 0.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.34 3.11 1.03 0.00 0.00 0.71 17 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.44 0.00 0.00 0.00 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER4a ExonRegion 0 2.94 4.84 33.25 8.25 4.51 97.75 11.39 28.24 47.83 17.12 0.00 0.00 0.00 0.00 0.00 0.00 3.41 141.65 136.40 44.10 0.00 0.35 3.34 19 E4a_E5a KnownJunction 0 6.89 6.38 61.03 15.62 12.22 61.27 8.08 58.41 56.86 30.35 0.00 0.00 0.00 0.00 0.00 0.00 4.02 225.80 233.23 56.95 0.00 0.00 0.00 20 ER5a ExonRegion 0 2.96 15.41 52.77 10.51 6.07 92.22 8.50 49.93 80.26 31.43 0.00 0.00 0.00 0.00 0.00 0.00 18.04 249.61 264.67 54.75 0.00 0.00 6.72 21 E5a_E8a KnownJunction 0 0.00 25.78 37.25 12.69 16.30 143.89 8.39 40.17 101.24 29.01 0.00 0.00 0.00 0.00 0.00 0.00 11.69 242.54 334.88 59.51 0.00 0.00 15.88 22 I5_AR1 ActiveIntronRegion 0 6.98 46.44 50.93 19.15 72.80 378.15 79.48 62.10 200.14 36.60 0.00 0.00 0.00 0.00 0.00 5.28 2.51 142.48 121.28 93.68 13.42 11.10 18.63 23 ER6a ExonRegion 0 1.91 1.74 3.15 0.65 7.26 6.11 4.10 11.36 49.05 7.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.87 3.03 14.39 12.17 6.95 4.47 24 ER7a ExonRegion 0 2.49 3.32 27.90 9.54 5.68 39.79 10.46 33.63 105.53 42.44 0.00 0.00 0.00 0.00 0.00 0.00 1.87 66.99 64.77 86.67 13.74 5.39 4.93 25 E7a_E8a KnownJunction 0 0.00 9.14 28.83 15.58 0.00 52.13 4.42 46.45 134.87 42.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 59.15 99.20 96.83 8.09 7.96 0.00 26 E8_Aa NovelBoundary 0 6.52 27.30 102.07 45.18 37.01 146.11 37.23 97.26 149.80 64.41 0.00 0.00 0.00 0.00 0.00 0.00 3.83 198.52 144.10 109.36 10.32 6.25 8.71 27 ER8a ExonRegion 0 8.99 36.30 150.35 56.61 47.73 339.05 48.25 220.38 602.28 140.11 0.00 0.00 0.00 0.00 0.00 0.00 7.63 367.13 271.48 208.37 38.71 24.20 26.01 28 E8_Da KnownBoundary 0 10.82 21.77 33.23 17.25 19.52 64.17 34.40 45.84 42.62 23.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 107.99 29.08 17.90 6.05 0.00 4.35 29 E8a_E9a KnownJunction 0 3.26 56.83 325.77 141.77 198.30 1169.21 122.90 458.51 1209.85 277.48 0.00 0.00 0.00 0.00 0.00 0.00 17.86 687.09 630.61 483.28 105.21 48.74 66.58 30 ER8b ExonRegion 0 0.00 2.86 0.16 0.68 3.82 7.71 3.38 0.10 1.65 0.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.98 3.13 0.12 0.45 0.00 0.00 31 E8_Db NovelBoundary 0 3.19 28.42 64.55 46.65 52.38 117.89 35.55 63.99 104.80 27.88 0.00 0.00 0.00 0.00 0.00 0.00 9.54 213.28 149.09 71.20 5.81 4.84 14.85 32 E8b_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.59 0.00 0.00 33 E9_Aa NovelBoundary 0 24.23 7.70 67.50 38.89 26.49 93.47 50.88 71.84 91.67 36.00 0.00 0.00 0.00 0.00 0.00 0.00 9.26 143.14 95.06 97.47 8.65 5.69 7.77 34 ER9a ExonRegion 0 19.29 86.97 265.12 115.62 211.63 885.15 153.44 446.73 1051.08 258.67 0.00 0.00 0.00 0.56 0.00 0.00 18.36 811.99 530.27 402.39 75.65 40.60 43.98 35 E9a_E10a KnownJunction 0 13.26 128.73 267.44 99.65 291.34 1097.32 245.19 458.47 1178.37 263.76 0.00 0.00 0.00 0.00 0.00 0.00 25.81 768.92 420.34 430.55 64.37 18.92 38.33 36 E10_Aa NovelBoundary 0 7.48 19.14 41.25 19.28 26.99 81.71 25.61 95.42 54.80 25.09 0.00 0.00 0.00 0.00 0.00 0.00 4.77 144.63 32.57 69.16 3.15 0.00 0.00 37 ER10a ExonRegion 0 15.49 153.78 283.35 96.92 150.27 891.87 227.11 409.53 1110.19 273.53 0.00 0.00 0.00 0.00 0.00 4.15 20.33 732.76 383.10 422.73 72.90 24.51 38.36 38 E10a_E11a KnownJunction 0 15.11 223.32 338.66 119.96 181.07 973.87 197.76 456.05 1194.29 304.64 0.00 0.00 0.00 0.00 0.00 3.25 21.60 679.05 451.12 536.97 66.53 34.54 40.89 39 ER11a ExonRegion 0 17.76 158.05 318.98 115.80 148.22 750.38 151.71 472.72 1294.48 297.73 0.00 0.00 0.00 0.00 0.00 3.17 22.89 761.97 394.20 447.85 68.39 52.33 29.90 40 E11a_E12a KnownJunction 0 35.49 185.56 363.12 150.26 158.66 816.12 187.16 652.87 1688.55 344.91 0.00 0.00 0.00 0.00 0.00 0.00 38.15 1000.39 470.41 492.03 52.88 62.21 18.01 41 Ix Intron 0 3.83 14.63 26.63 15.11 98.48 139.20 58.51 33.03 53.60 22.92 0.28 0.42 0.95 0.46 0.32 0.44 2.91 33.77 47.55 25.93 3.45 3.88 5.75 42 Ix_AR2 ActiveIntronRegion 0 3.41 12.91 32.36 15.45 67.19 88.88 32.52 28.75 54.32 21.78 0.00 0.00 0.62 0.39 0.00 0.00 1.70 29.93 40.71 16.58 1.67 3.54 3.99 43 Ix_SR3 SilentIntronRegion 0 1.44 13.87 27.10 20.44 211.78 286.47 109.28 51.87 67.19 32.94 0.00 0.74 1.32 0.00 0.00 0.00 1.69 18.04 72.26 30.85 3.76 5.33 8.52 44 Ix_AR4 ActiveIntronRegion 0 7.55 21.11 31.41 14.48 58.48 96.34 59.10 33.12 56.21 22.25 0.90 0.67 1.20 1.05 1.00 1.38 5.63 35.46 39.00 31.99 5.46 4.84 5.92 45 ER12a ExonRegion 0 39.22 145.20 373.63 158.06 193.05 853.73 186.09 554.65 1404.91 335.62 0.00 0.00 0.00 0.95 0.00 8.92 20.26 1030.94 640.00 529.32 64.19 60.52 50.16 46 E12a_E13a KnownJunction 0 53.71 172.40 497.41 194.35 282.77 1068.99 231.90 571.22 1564.54 368.33 0.00 0.00 0.00 0.00 0.00 8.03 35.44 1067.71 714.56 543.94 70.86 68.70 49.60 47 ER13a ExonRegion 0 25.21 122.37 446.34 156.66 177.49 784.13 201.13 548.50 1435.18 312.70 3.46 0.00 0.00 0.00 0.00 11.99 40.02 881.02 457.46 497.31 72.37 65.61 34.72 48 E13a_E14a KnownJunction 0 26.89 193.12 494.90 157.29 187.18 796.30 205.97 605.02 1430.97 296.13 0.00 0.00 0.00 0.00 0.00 11.45 18.98 793.54 439.07 562.47 65.98 73.36 44.56 49 E14_Aa NovelBoundary 0 5.78 3.35 38.17 10.45 11.88 73.82 13.91 48.30 44.10 27.45 2.63 0.00 0.00 0.00 0.00 0.00 4.49 87.55 73.41 20.77 6.05 3.12 18.18 50 ER14a ExonRegion 0 18.44 145.54 501.01 199.90 123.60 600.45 118.33 609.05 1532.47 372.60 0.95 0.00 0.00 1.45 1.17 8.34 26.09 777.09 501.82 476.66 68.17 67.15 58.87 51 E14a_E15a KnownJunction 0 21.19 124.58 570.32 197.64 70.71 500.85 88.24 637.72 1699.92 374.56 0.00 0.00 0.00 0.00 0.00 8.72 35.16 518.87 247.63 454.71 58.63 25.41 21.60 52 ER15a ExonRegion 0 32.86 162.01 484.71 165.05 80.55 691.73 148.42 598.29 1518.02 346.08 0.00 0.00 0.00 1.17 0.00 11.47 31.27 665.74 524.47 546.81 73.42 62.07 41.99 53 E15a_E16a KnownJunction 0 48.23 179.18 409.42 192.28 128.95 865.18 220.24 617.55 1370.47 306.60 0.00 0.00 0.00 0.00 0.00 8.37 8.70 865.67 483.40 548.28 57.51 89.46 31.67 54 ER16a ExonRegion 0 26.99 133.83 499.53 216.65 178.45 943.98 211.86 621.18 1545.13 368.97 0.00 0.42 0.00 0.03 0.06 6.57 25.01 764.65 484.73 474.34 51.66 75.01 31.68 55 E16a_E17a KnownJunction 0 59.64 238.31 595.93 286.11 315.79 1634.46 324.60 624.37 1587.95 379.59 0.00 0.00 0.00 0.00 0.00 0.00 49.18 891.54 838.05 529.87 59.62 69.13 67.44 56 ER17a ExonRegion 0 26.59 151.16 536.33 232.71 204.53 1121.86 204.91 567.47 1540.01 372.12 0.00 3.34 0.00 0.24 2.12 0.50 34.04 863.75 544.17 484.26 73.23 60.64 69.26 57 E17a_E18a KnownJunction 0 20.82 151.88 337.72 164.81 208.83 977.28 197.36 406.06 1123.31 278.42 0.00 0.00 0.00 0.00 0.00 0.00 16.74 625.49 273.14 416.16 68.08 38.03 44.64 58 ER18a ExonRegion 0 23.16 145.97 467.27 201.74 201.20 800.71 192.82 594.49 1435.48 352.80 0.00 0.00 3.91 1.58 0.00 6.27 19.71 937.17 389.15 458.51 71.07 33.68 51.31 59 E18a_E19a KnownJunction 0 40.67 173.46 422.84 176.73 236.33 810.73 255.39 560.70 1168.80 278.07 0.00 0.00 6.82 0.00 0.00 15.98 16.46 914.05 578.37 512.49 54.92 47.52 63.94 60 ER19a ExonRegion 0 37.85 217.83 510.20 226.89 225.95 791.21 213.46 628.69 1459.86 357.04 1.82 0.00 1.08 2.44 0.00 4.17 18.92 1080.93 711.32 499.83 42.76 66.19 63.25 61 E19_Da NovelBoundary 0 2.82 21.44 27.26 24.24 48.47 112.21 29.19 56.23 126.24 31.59 0.00 0.00 0.00 2.18 4.45 0.00 0.00 80.30 96.57 52.73 17.48 3.12 0.00 62 E19a_E20a KnownJunction 0 0.00 5.79 1.33 1.76 8.32 32.31 0.00 32.74 64.90 12.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30.22 0.00 8.25 6.12 0.00 0.00 63 E19a_E21a KnownJunction 0 54.97 319.68 539.07 246.19 229.54 738.67 204.25 609.83 1453.57 346.55 0.00 0.00 0.00 0.00 0.00 0.00 33.94 1005.04 720.68 540.42 38.49 87.81 30.73 64 E20_Aa NovelBoundary 0 9.56 42.56 31.34 26.64 56.20 158.03 49.55 59.02 84.46 41.93 0.00 0.00 0.00 4.94 8.78 4.10 4.68 46.93 33.32 61.94 14.89 2.76 8.11 65 ER20a ExonRegion 0 0.38 1.77 1.35 2.48 3.02 13.49 0.65 16.89 33.38 4.82 0.10 0.00 0.00 0.25 0.15 0.00 0.00 29.90 0.82 4.69 5.09 2.35 0.00 66 E20_Da NovelBoundary 0 14.22 45.12 57.80 22.41 40.58 163.77 49.51 96.73 137.73 38.57 0.00 0.00 0.00 0.00 4.57 0.00 3.93 120.88 55.91 71.27 5.50 0.00 11.95 67 E20a_E21a KnownJunction 0 0.00 0.00 0.00 1.73 0.00 2.38 0.00 4.56 14.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.26 0.00 3.26 3.15 5.51 0.00 68 Ix Intron 0 5.56 38.79 59.82 33.12 41.42 162.21 33.21 101.64 190.54 57.52 1.74 1.28 0.00 1.27 1.42 2.26 3.42 136.91 41.17 78.52 7.01 4.75 5.07 69 Ix_AR1 ActiveIntronRegion 0 5.57 38.89 59.98 33.21 41.53 162.65 33.30 101.91 191.05 57.67 1.74 1.29 0.00 1.27 1.42 2.27 3.43 137.28 41.28 78.73 7.03 4.76 5.09 70 E21_Aa NovelBoundary 0 6.67 64.92 63.89 23.51 32.60 147.24 31.27 88.93 156.74 52.17 0.00 0.00 0.00 0.00 0.00 0.00 4.77 130.62 41.98 93.51 3.03 18.31 0.00 71 ER21a ExonRegion 0 73.10 348.28 458.37 221.18 375.19 1079.37 294.99 596.68 1291.30 314.43 1.39 4.24 1.38 2.38 3.22 7.04 22.12 640.71 464.09 369.21 42.92 46.99 42.16 72 ER21b ExonRegion 0 2.12 4.07 0.00 1.36 2.68 5.50 0.00 5.19 9.88 1.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.13 2.20 0.00 0.00 73 IG38 Intergenic 0 2.35 5.72 12.46 6.06 5.02 17.36 4.74 6.37 14.28 4.23 6.26 6.17 0.99 10.25 11.29 4.82 4.79 9.71 5.43 7.62 1.88 3.38 1.50 74 IG38_SR1 SilentIntergenicRegion 0 2.35 5.73 12.48 6.07 5.03 17.39 4.75 6.38 14.31 4.23 6.27 6.18 0.99 10.27 11.31 4.82 4.79 9.73 5.44 7.63 1.88 3.38 1.51