Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CTCF Gene 0 186.54 228.98 159.77 133.08 230.70 127.62 208.40 154.71 126.21 146.32 348.41 263.59 229.24 357.30 216.92 304.12 317.89 286.70 163.28 230.39 114.31 156.62 129.20 2 401394 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 2.25 0.00 0.00 1.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.52 4.24 0.00 0.00 0.00 0.00 3 264010 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 379301 Transcript 0 1.89 3.95 7.72 3.60 11.88 5.14 11.99 7.82 5.11 5.44 12.82 6.30 6.66 20.78 4.45 22.56 8.04 13.70 2.40 14.25 8.77 7.07 5.63 5 IG50 Intergenic 0 14.96 7.06 7.10 6.13 11.80 3.52 8.72 5.40 8.42 3.47 3.59 3.90 6.74 5.28 13.44 9.52 7.20 17.10 7.20 9.45 1.43 0.87 2.79 6 IG50_SR1 SilentIntergenicRegion 0 5.60 1.29 7.73 1.50 2.55 0.78 4.20 2.73 3.51 2.71 1.44 3.26 1.23 3.41 11.54 6.60 8.03 17.01 3.37 5.18 2.10 2.65 3.73 7 IG50_AR1 ActiveIntergenicRegion 0 5.11 1.30 5.20 0.67 3.06 2.02 2.55 2.23 4.67 2.79 1.27 0.45 0.70 2.91 13.45 5.72 7.30 15.29 6.56 8.74 0.20 0.79 4.57 8 IG50_SR2 SilentIntergenicRegion 0 6.71 2.58 6.54 3.30 2.70 3.64 5.04 4.52 7.01 4.36 3.29 1.89 1.79 2.72 12.53 8.37 7.60 23.59 8.15 9.40 1.86 0.45 2.05 9 IG50_AR2 ActiveIntergenicRegion 0 26.85 13.16 7.94 10.02 20.36 4.79 11.55 9.85 15.53 5.51 4.63 5.61 6.64 6.63 19.21 10.78 9.73 17.43 12.77 15.19 1.67 2.19 4.98 10 IG50_SR3 SilentIntergenicRegion 0 10.46 7.34 5.39 5.80 13.57 6.31 10.98 4.58 7.06 2.61 3.19 4.13 6.60 6.38 11.85 7.96 7.29 12.77 8.43 10.00 0.80 0.21 2.67 11 IG50_AR3 ActiveIntergenicRegion 0 17.39 10.73 3.65 7.04 18.99 3.83 6.97 1.97 12.25 4.27 4.62 3.14 3.86 5.30 8.76 26.28 3.79 11.68 4.75 9.41 2.66 0.00 0.09 12 IG50_SR4 SilentIntergenicRegion 0 41.15 10.83 10.17 11.31 20.29 4.14 12.18 3.95 11.29 3.17 3.75 4.38 13.02 5.98 16.38 12.23 4.26 16.24 4.11 9.27 1.60 0.50 3.08 13 IG50_AR4 ActiveIntergenicRegion 0 22.64 15.31 6.63 11.11 20.60 3.96 20.54 10.99 17.10 4.03 9.90 10.45 20.20 7.82 22.41 10.62 10.56 17.66 9.54 10.96 1.46 1.73 3.90 14 IG50_SR5 SilentIntergenicRegion 0 17.03 10.18 8.66 7.76 20.12 3.19 13.34 5.26 7.47 3.20 3.10 6.11 15.20 6.50 10.60 9.83 5.86 8.45 5.23 9.66 0.74 0.81 1.84 15 IG50_AR5 ActiveIntergenicRegion 0 7.70 5.93 5.80 6.05 8.84 3.09 5.04 7.18 6.78 2.21 4.38 2.74 1.75 7.48 12.31 11.17 7.55 23.29 8.05 7.45 1.79 0.14 2.09 16 ER1a ExonRegion 0 1.34 0.52 1.80 0.00 0.24 4.42 2.22 0.26 0.00 1.21 7.13 1.42 1.54 3.56 2.70 4.24 5.94 5.34 4.79 2.65 1.46 1.37 3.71 17 E1_Ab KnownBoundary 0 7.56 3.22 1.60 0.00 3.31 30.49 16.91 2.18 0.00 0.00 12.79 0.00 0.00 4.53 0.00 11.79 4.39 19.44 29.74 3.26 6.30 0.00 4.27 18 ER1b ExonRegion 0 5.23 6.87 2.38 2.36 14.04 43.57 45.17 2.91 4.28 10.10 65.01 8.71 11.77 28.43 14.67 44.11 68.37 20.34 43.93 25.24 38.38 5.76 25.47 19 E1a_E2a KnownJunction 0 0.00 8.88 17.15 12.29 0.00 16.18 6.01 24.93 25.69 38.84 164.83 43.96 39.93 135.15 69.23 76.73 159.51 82.95 84.90 57.65 108.23 16.90 63.60 20 ER2a ExonRegion 1 10.53 26.87 33.49 17.90 22.71 21.57 36.19 63.04 55.13 67.46 202.99 56.47 53.31 150.86 65.64 173.32 196.30 214.62 148.60 140.24 100.52 42.65 90.89 21 E2a_E3a KnownJunction 0 6.45 33.88 32.17 17.01 22.07 30.78 30.87 61.86 54.92 73.55 119.24 61.67 60.06 116.72 50.07 128.34 71.44 219.41 70.59 86.35 71.35 33.68 27.57 22 E2a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 2.25 0.00 0.00 1.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.52 4.24 0.00 0.00 0.00 0.00 23 ER3a ExonRegion 0 72.11 164.86 101.77 89.07 137.33 88.16 154.21 109.30 101.86 126.85 318.10 207.67 174.86 340.71 133.95 284.90 301.97 272.24 151.19 222.77 112.81 129.18 124.76 24 E3a_E4a KnownJunction 0 94.46 231.14 162.71 195.45 251.78 110.67 220.42 182.78 187.99 206.54 643.37 574.99 450.62 513.28 178.01 468.34 651.99 418.10 272.85 365.09 199.66 199.99 143.15 25 ER4a ExonRegion 0 109.51 187.98 171.44 184.20 172.31 122.52 206.58 194.05 164.14 200.03 547.50 422.44 327.53 522.57 197.64 407.75 542.00 514.30 229.25 331.23 211.81 212.95 181.83 26 E4a_E5a KnownJunction 0 90.46 224.37 152.66 142.27 180.31 124.76 186.76 144.01 136.98 141.48 518.18 376.77 264.11 570.31 211.39 349.65 549.32 452.71 194.45 367.14 238.89 187.31 154.25 27 I4_AR1 ActiveIntronRegion 0 35.45 17.84 20.73 22.63 30.48 6.41 42.97 23.46 13.15 10.68 9.84 16.76 29.23 12.32 21.87 15.11 19.11 11.94 11.24 25.11 4.22 5.20 5.71 28 I4_AR2 ActiveIntronRegion 0 82.72 10.51 6.74 8.18 55.30 12.53 91.57 12.46 6.69 6.16 6.36 14.79 26.58 19.76 22.48 11.89 15.13 7.62 5.44 18.00 2.20 8.33 2.94 29 I4 Intron 0 42.66 16.80 15.69 17.34 29.33 6.56 39.08 15.60 11.56 9.79 8.20 21.86 28.03 10.70 16.67 22.43 18.18 15.80 10.18 25.31 5.34 6.66 9.87 30 I4_SR1 SilentIntronRegion 0 37.64 13.04 17.35 20.74 29.94 6.95 35.29 15.33 14.00 11.81 6.63 19.26 32.90 10.65 18.70 21.48 17.56 15.18 10.23 25.43 5.75 9.20 10.61 31 I4_AR1 ActiveIntronRegion 0 54.32 22.19 14.72 14.09 31.57 5.93 45.21 17.16 9.23 7.58 10.10 26.24 24.29 11.15 15.04 26.10 19.05 17.80 9.86 27.04 5.17 4.08 9.71 32 ER5a ExonRegion 0 147.34 281.71 206.00 173.68 200.61 137.60 191.50 200.32 179.00 193.73 490.51 446.90 382.41 567.62 227.44 483.53 474.12 685.70 243.25 378.25 224.98 212.69 215.58 33 E5_Da NovelBoundary 0 139.88 335.01 169.63 138.88 188.46 132.76 174.71 139.12 159.87 145.97 389.36 266.49 379.36 501.80 190.87 345.12 436.09 413.75 228.15 311.34 161.55 166.68 192.58 34 E5a_E9b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 E5b_E6a KnownJunction 0 144.77 392.56 183.08 147.40 222.16 154.12 264.45 184.75 171.06 160.12 517.97 263.19 275.31 597.68 215.71 460.31 505.00 428.71 225.04 356.47 204.85 186.52 176.10 36 ER5b ExonRegion 0 123.91 324.26 170.05 144.96 191.19 146.70 210.45 160.90 175.27 160.57 502.38 297.95 335.55 583.06 228.80 409.88 511.04 470.84 227.32 329.11 189.22 178.80 183.14 37 ER6a ExonRegion 0 138.48 336.43 204.58 179.09 196.24 147.02 222.85 170.47 182.19 164.43 427.38 344.35 359.93 479.53 201.41 430.93 453.12 446.41 183.62 349.04 173.55 189.81 178.29 38 E6a_E7a KnownJunction 0 152.69 398.02 177.02 186.39 246.60 257.98 317.66 174.56 175.20 163.64 556.51 516.17 449.48 476.78 281.97 505.68 489.76 465.44 303.35 356.27 175.94 239.12 164.41 39 ER7a ExonRegion 0 138.53 276.63 222.00 235.89 291.60 210.81 299.51 213.00 203.88 205.48 542.99 479.27 480.82 522.46 249.33 546.57 503.96 589.68 244.08 398.85 152.64 241.73 238.67 40 E7a_E8a KnownJunction 0 168.62 359.74 213.92 225.11 263.75 204.60 310.60 225.54 190.91 230.29 484.39 483.76 376.27 518.81 313.37 540.63 473.68 665.29 268.15 363.88 203.25 199.25 159.46 41 ER8a ExonRegion 0 153.66 292.01 201.22 159.90 203.52 146.60 218.59 193.92 187.97 208.72 510.92 420.50 370.16 475.57 274.84 458.82 457.78 560.80 227.64 363.78 180.27 223.20 175.82 42 E8a_E9a KnownJunction 0 222.63 330.07 175.90 118.43 228.52 119.31 228.85 162.16 197.42 191.04 474.12 397.48 408.58 397.08 276.53 401.95 341.28 468.34 146.83 368.23 150.43 163.43 152.80 43 ER9a ExonRegion 0 187.49 298.16 190.69 115.37 180.12 118.98 195.97 149.68 162.73 169.63 450.01 315.04 270.61 384.94 253.38 306.48 387.09 441.89 160.28 276.95 199.84 186.86 120.74 44 E9_Ab KnownBoundary 0 238.56 301.20 190.65 121.93 202.46 146.05 219.00 159.20 136.72 182.85 348.61 243.98 153.89 298.96 299.03 241.99 338.01 366.90 156.99 224.16 164.95 175.80 139.31 45 ER9b ExonRegion 0 129.38 209.97 158.28 93.31 189.30 175.46 228.06 132.49 130.04 136.32 370.06 314.19 264.78 400.89 225.14 345.68 352.12 374.30 172.11 264.87 173.61 171.92 140.08 46 E9a_E10a KnownJunction 0 162.77 200.10 150.17 139.48 260.44 215.10 286.40 152.80 142.65 139.57 384.47 505.96 456.46 395.73 245.01 589.59 299.77 470.29 214.69 242.63 125.90 169.00 213.07 47 ER10a ExonRegion 0 101.86 134.74 176.87 146.82 199.70 154.03 194.98 188.87 159.95 171.79 537.81 337.89 349.30 557.12 291.94 626.73 483.00 557.33 345.17 312.14 163.80 249.81 238.45 48 E10a_E11a KnownJunction 0 53.71 147.21 151.35 96.16 149.41 156.10 160.62 155.71 150.55 142.82 400.36 304.75 352.90 605.87 273.07 238.57 470.59 274.59 227.87 290.76 171.56 133.67 89.63 49 ER11a ExonRegion 0 153.46 176.14 134.59 102.69 160.71 127.38 159.76 132.74 117.78 143.95 341.57 273.50 332.44 462.29 261.79 453.30 414.71 306.50 254.12 235.85 153.50 219.44 175.60 50 E11a_E12a KnownJunction 0 137.58 130.50 100.29 77.05 232.85 129.19 270.05 100.14 111.14 142.21 270.17 148.25 150.31 279.42 173.19 264.46 317.81 280.76 165.84 156.09 117.69 83.52 94.75 51 E11a_E12b KnownJunction 0 3.78 7.89 15.43 7.19 23.77 10.28 23.98 15.65 10.21 10.88 25.64 12.60 13.31 41.56 8.90 45.12 16.08 27.40 4.80 28.51 17.54 14.14 11.27 52 E12_Ab NovelBoundary 0 100.98 6.58 13.48 1.70 32.60 27.37 36.30 11.34 7.58 2.90 12.27 0.00 0.00 14.48 15.45 28.45 13.84 12.35 18.92 18.02 0.00 3.12 19.97 53 ER12a ExonRegion 0 123.36 143.80 97.33 77.88 207.94 127.58 221.67 110.37 95.99 130.58 307.88 158.33 162.81 388.40 176.56 290.84 304.15 262.38 182.93 162.92 122.78 116.68 94.81 54 ER12b ExonRegion 0 149.36 214.90 99.13 81.45 194.50 130.47 202.12 104.07 91.00 121.24 273.28 145.60 168.60 375.42 187.34 257.17 273.38 200.37 128.42 162.24 116.14 131.17 102.86 55 E12_Da KnownBoundary 1 131.06 223.25 113.21 99.09 125.72 64.96 147.37 117.47 89.67 107.15 225.43 93.18 58.92 304.43 200.75 216.87 189.81 217.75 92.61 183.44 65.24 103.79 96.46 56 ER12c ExonRegion 0 367.64 333.72 230.86 186.40 393.19 164.53 296.64 213.91 145.84 172.78 349.98 290.66 223.99 338.73 311.38 256.65 280.12 184.30 143.75 216.49 78.08 170.38 111.16