Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 LONP2 Gene 0 63.81 93.37 56.79 49.82 82.45 60.63 64.51 59.14 87.54 91.31 98.69 127.09 96.07 120.73 83.10 104.77 106.58 81.64 56.14 79.10 110.79 90.30 91.24 2 285737 Transcript 0 48.66 119.17 58.96 50.16 81.98 71.43 73.19 57.89 107.22 125.02 156.51 183.30 137.15 211.55 121.16 145.90 158.42 111.84 63.91 112.09 166.34 110.96 106.86 3 416006 Transcript 0 0.00 3.16 2.35 0.00 2.08 0.00 2.98 3.66 3.72 7.33 9.95 3.15 6.41 9.92 4.82 8.93 10.66 6.59 1.88 2.97 7.32 7.13 2.13 4 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 2.14 5.87 1.59 0.00 0.99 0.69 7.35 0.00 0.00 6.50 2.32 4.16 3.96 7.76 0.00 2.13 10.14 0.00 2.94 5 ER1b ExonRegion 1 8.02 9.98 10.30 6.56 8.84 23.97 13.63 14.15 27.23 43.83 102.65 18.21 28.49 96.52 44.15 111.35 131.88 99.56 49.14 73.73 151.86 34.78 127.38 6 E1a_E2a KnownJunction 0 13.48 15.00 24.63 21.11 19.02 15.79 20.36 17.99 46.67 61.81 88.13 49.67 53.41 143.33 74.42 82.20 91.16 99.12 18.45 72.23 134.86 42.25 26.63 7 I1_AR3 ActiveIntronRegion 0 1.41 4.07 19.20 6.81 5.35 0.00 6.40 8.35 8.03 2.87 0.00 8.66 2.35 1.62 5.80 2.97 0.00 0.00 0.00 12.06 0.00 2.08 2.94 8 ER2a ExonRegion 0 18.51 80.04 39.84 29.89 41.09 56.33 56.31 39.07 93.57 100.99 180.66 98.32 129.56 201.52 81.78 121.52 192.06 83.17 40.28 126.15 178.52 105.48 78.54 9 E2a_E3a KnownJunction 1 17.71 166.94 54.05 37.56 62.90 18.85 58.87 50.40 136.89 156.39 262.86 282.09 269.79 217.61 65.89 212.68 237.59 98.24 80.57 145.28 198.31 129.02 150.41 10 E2a_E4a KnownJunction 0 0.00 6.31 4.70 0.00 4.16 0.00 5.96 7.31 7.44 14.67 19.90 6.30 12.82 19.84 9.64 17.86 21.32 13.18 3.76 5.94 14.64 14.27 4.27 11 ER3a ExonRegion 0 40.78 153.21 55.59 55.16 61.44 23.23 68.75 58.05 131.75 148.92 234.99 273.74 253.87 236.16 102.01 191.66 224.19 89.64 80.94 143.15 157.05 144.03 140.09 12 E3a_E4a KnownJunction 0 41.19 218.18 52.66 53.01 100.51 44.63 109.66 43.46 119.01 153.38 192.89 451.35 300.47 242.75 82.58 143.98 182.42 50.28 46.78 144.26 141.16 167.23 134.11 13 ER4a ExonRegion 1 49.61 181.15 64.56 70.71 107.60 65.15 125.60 69.78 153.43 173.81 236.96 546.36 419.05 279.69 131.62 231.51 237.88 79.56 79.35 180.12 160.48 185.03 155.57 14 E4a_E5a KnownJunction 1 48.01 249.69 52.72 68.66 122.24 50.08 150.90 78.25 141.26 179.33 245.59 582.64 277.09 266.17 150.20 194.14 214.31 52.23 125.27 206.13 108.85 225.34 181.74 15 ER5a ExonRegion 1 48.46 247.65 51.82 57.52 88.10 60.87 119.51 68.21 134.59 154.96 232.80 586.43 394.36 234.55 113.84 179.32 225.59 63.23 73.57 152.76 80.30 195.50 117.48 16 E5a_E6a KnownJunction 1 74.68 240.81 75.57 63.36 135.74 62.29 157.09 71.18 128.36 149.33 268.33 639.96 307.77 288.60 114.96 195.08 248.15 43.53 69.18 146.88 141.10 213.70 93.81 17 ER6a ExonRegion 1 52.07 124.63 75.93 58.53 103.59 76.15 116.82 87.64 142.17 173.53 238.66 760.07 408.53 302.38 120.05 177.98 250.14 105.54 75.58 184.68 114.48 217.37 130.67 18 E6a_E7a KnownJunction 1 30.82 81.63 68.42 60.33 46.35 101.42 97.16 88.76 124.45 170.87 119.61 621.95 450.46 329.63 143.03 158.25 216.46 109.81 68.90 137.55 98.04 115.43 119.42 19 ER7a ExonRegion 0 40.95 127.82 72.17 40.03 99.15 79.93 110.51 83.97 128.96 153.33 244.56 438.56 239.77 312.63 145.80 210.01 246.39 177.16 84.70 144.38 261.08 161.28 163.81 20 E7a_E8a KnownJunction 0 38.90 121.36 92.49 36.63 95.25 69.96 113.37 62.19 169.10 176.97 204.21 221.47 136.35 367.65 172.45 340.08 270.78 218.87 115.49 147.07 322.85 180.94 209.40 21 I7_AR2 ActiveIntronRegion 1 1.45 2.08 0.62 2.36 0.91 0.31 6.91 2.86 4.87 1.45 2.78 28.78 23.21 0.23 0.17 1.02 4.80 3.18 4.35 11.60 2.75 1.60 4.55 22 ER8a ExonRegion 0 40.41 73.29 81.61 42.72 101.49 89.78 92.51 60.34 162.68 148.35 263.21 195.25 133.67 291.31 150.97 249.81 284.57 201.33 99.35 144.85 312.04 157.53 198.45 23 E8a_E9a KnownJunction 0 65.64 88.60 88.55 66.26 100.00 77.40 105.33 65.64 177.63 149.94 269.02 186.66 123.86 285.54 213.12 274.46 316.13 272.68 133.46 177.11 288.07 173.72 215.54 24 ER9a ExonRegion 0 55.62 86.16 88.10 54.79 102.19 93.27 106.71 77.79 157.10 158.55 293.33 275.31 173.87 364.51 167.83 289.81 322.57 227.76 111.83 167.87 304.67 197.67 221.90 25 E9a_E10a KnownJunction 0 44.30 90.90 75.57 65.16 66.13 63.60 91.59 69.95 118.00 161.12 265.01 315.40 246.41 362.65 249.21 227.89 276.30 154.91 105.32 110.19 226.85 111.81 148.19 26 ER10a ExonRegion 0 51.20 115.50 76.05 55.72 102.23 89.87 111.64 77.96 134.08 158.55 260.97 219.06 201.30 355.81 181.09 282.98 259.55 217.86 123.65 168.91 307.67 173.47 178.37 27 E10a_E11a KnownJunction 0 53.64 114.26 85.80 46.51 123.34 82.96 101.35 64.94 116.55 138.31 239.59 338.36 204.69 335.04 225.85 289.58 257.22 158.43 68.90 174.17 280.65 182.84 176.70 28 ER11a ExonRegion 0 47.54 125.72 82.19 63.21 94.99 81.63 96.03 68.73 143.89 147.48 243.78 231.79 162.47 305.14 225.60 249.06 228.38 157.72 109.90 157.87 292.90 158.52 167.59 29 E11a_E12a KnownJunction 1 96.98 216.28 91.24 72.25 148.64 130.10 140.53 98.00 148.93 150.48 266.65 102.18 203.88 355.35 257.62 258.74 248.25 204.03 75.11 173.41 289.86 166.19 152.46 30 ER12a ExonRegion 0 88.49 135.20 100.93 95.30 143.42 132.06 146.81 91.40 173.75 166.41 280.88 219.59 175.86 339.12 254.09 303.16 261.09 242.03 118.55 168.77 294.03 203.79 200.82 31 E12a_E14a KnownJunction 0 65.05 127.87 98.28 59.57 116.04 122.60 74.90 85.68 149.94 142.61 191.52 261.99 124.02 354.64 236.85 186.28 209.72 210.13 103.81 159.79 243.40 122.34 130.43 32 E12a_E16a NovelJunction 0 0.00 0.00 1.42 0.00 0.00 0.00 0.00 0.00 1.27 0.00 0.00 12.60 6.82 2.47 0.00 0.00 0.00 0.00 0.00 0.00 2.66 8.57 4.35 33 I12_SR1 SilentIntronRegion 0 1.02 2.99 0.85 2.96 5.25 0.90 16.14 0.00 1.81 4.12 6.52 17.32 11.36 15.59 13.89 4.37 12.95 4.51 5.94 9.21 5.38 3.07 9.88 34 I12 Intron 0 10.95 7.42 7.75 12.26 10.74 5.17 25.99 6.83 8.30 8.61 6.86 22.04 30.48 11.86 5.68 10.94 14.89 6.28 5.70 19.19 10.08 10.29 15.00 35 I12_AR5 ActiveIntronRegion 0 6.35 3.05 15.11 14.76 10.26 0.00 16.99 5.19 3.71 8.03 16.11 4.33 18.76 13.94 9.67 10.15 11.55 1.85 8.49 20.39 15.43 16.49 2.94 36 I12_AR6 ActiveIntronRegion 0 6.11 2.03 19.61 18.02 9.22 0.00 17.51 5.19 3.71 8.16 17.18 4.81 17.72 9.93 7.41 16.84 15.04 1.85 6.37 21.99 14.20 16.44 5.87 37 I12_AR7 ActiveIntronRegion 0 5.49 4.89 20.57 14.50 9.51 4.45 21.83 8.53 5.60 13.25 9.34 17.32 21.75 9.99 9.88 14.04 18.12 6.49 10.30 26.44 9.71 9.44 11.93 38 I12_AR8 ActiveIntronRegion 0 11.68 8.46 7.91 12.78 10.00 5.62 26.63 6.01 9.62 9.34 7.01 14.83 28.85 10.75 5.22 12.49 12.17 8.01 7.69 20.22 12.54 12.46 16.28 39 I12_SR1 SilentIntronRegion 0 12.79 9.22 7.33 13.76 11.51 7.50 28.80 8.61 9.67 6.95 7.20 35.82 40.20 13.48 6.04 9.98 18.19 5.05 4.09 20.46 8.78 9.86 11.98 40 I12_AR9 ActiveIntronRegion 0 9.29 4.07 5.47 8.92 12.63 1.95 25.03 6.59 5.14 9.78 4.76 22.57 25.65 12.29 4.85 9.03 17.40 5.43 2.42 15.45 6.72 6.43 20.49 41 ER13a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 I13 Intron 0 14.49 16.26 11.29 23.19 17.43 8.82 25.02 10.52 10.04 10.70 7.07 18.11 19.66 13.67 8.58 14.34 12.91 14.94 9.39 18.35 13.73 10.97 17.88 43 I13_AR2 ActiveIntronRegion 0 29.47 17.64 15.22 30.71 23.90 10.45 36.05 12.06 10.71 12.60 7.55 23.39 29.88 13.01 10.76 16.13 15.52 14.04 10.94 19.03 15.57 12.05 22.39 44 I13_SR2 SilentIntronRegion 0 11.29 19.12 14.08 25.55 19.55 11.44 21.34 13.73 13.79 11.89 7.15 18.00 13.82 16.13 7.71 12.44 11.84 16.55 10.11 22.77 15.33 11.46 16.43 45 I13_AR3 ActiveIntronRegion 0 9.57 23.08 13.49 28.50 18.55 9.09 29.32 12.35 12.90 13.24 10.13 22.78 21.46 17.69 12.19 21.44 17.87 23.78 12.56 22.21 18.91 13.33 20.74 46 I13_SR3 SilentIntronRegion 0 5.02 14.82 5.84 10.03 19.05 6.68 22.10 4.10 6.32 8.49 4.75 5.36 5.09 12.47 3.39 2.22 4.31 4.60 8.04 4.22 6.95 6.82 14.78 47 I13_AR4 ActiveIntronRegion 0 3.93 18.63 4.99 6.08 17.37 8.48 16.96 2.76 5.67 7.06 4.57 3.33 12.44 10.00 6.01 11.85 4.21 4.39 4.25 11.62 0.96 10.45 5.87 48 I13 Intron 0 27.19 24.58 21.52 30.23 30.53 20.37 25.11 17.32 18.08 21.95 10.51 20.97 22.72 16.57 9.90 19.76 12.47 16.67 13.96 20.42 8.99 21.88 17.31 49 I13_SR1 SilentIntronRegion 0 27.19 24.58 21.52 30.23 30.53 20.37 25.11 17.32 18.08 21.95 10.51 20.97 22.72 16.57 9.90 19.76 12.47 16.67 13.96 20.42 8.99 21.88 17.31 50 E14_Aa NovelBoundary 0 44.60 59.86 46.54 26.84 20.37 23.05 16.30 23.00 34.61 15.20 20.53 12.75 7.30 21.07 13.72 12.82 18.51 43.19 9.04 13.87 20.20 19.72 35.51 51 ER14a ExonRegion 0 29.28 99.82 49.33 37.29 49.99 61.04 55.73 39.98 85.55 96.05 113.71 112.52 50.49 178.55 123.90 109.28 112.71 130.80 49.16 84.04 158.75 88.71 84.57 52 E14_Da NovelBoundary 0 10.67 25.92 29.77 13.35 12.22 2.90 18.02 15.77 9.23 15.15 15.21 6.30 6.33 4.94 16.81 15.98 12.25 22.72 0.00 21.09 8.59 19.17 27.66 53 E14a_E15a KnownJunction 0 79.57 123.14 69.57 65.46 144.40 154.74 103.52 71.63 123.61 161.23 251.01 197.31 110.87 355.23 238.95 217.04 234.50 177.79 112.10 164.01 294.31 173.54 187.37 54 E15_Aa NovelBoundary 0 20.23 24.40 6.59 23.44 26.32 5.11 19.78 12.45 19.07 23.91 5.16 17.41 19.80 5.12 4.45 11.54 4.77 1.82 8.00 5.69 14.76 14.82 10.93 55 ER15a ExonRegion 0 31.33 49.89 49.35 38.83 34.84 48.78 42.66 53.88 86.92 113.70 99.36 46.69 29.37 105.64 66.44 74.41 118.30 92.19 32.75 61.68 142.98 59.18 50.52 56 E15_Da NovelBoundary 0 13.26 50.58 5.53 14.32 15.87 0.00 14.97 12.65 5.30 10.88 4.79 30.61 18.83 7.06 0.00 16.15 4.77 12.44 13.27 12.34 0.00 8.08 11.27 57 E15a_E16a KnownJunction 0 102.09 166.02 104.82 101.69 158.83 176.94 162.21 116.12 166.49 208.31 176.20 155.60 184.89 370.48 235.74 263.61 217.11 213.36 88.19 168.81 263.48 162.33 125.23 58 E16_Aa NovelBoundary 0 43.86 46.50 3.61 18.91 3.74 19.65 19.78 10.43 11.89 18.43 2.47 6.30 0.00 0.00 5.19 8.72 12.44 10.61 3.95 8.50 6.18 2.82 7.94 59 ER16a ExonRegion 0 79.65 86.58 55.93 53.01 88.67 57.58 54.08 59.68 71.09 68.93 35.21 51.71 47.78 47.96 56.91 55.89 43.70 48.19 44.77 47.72 53.87 63.27 62.94 60 IG39 Intergenic 0 63.18 60.38 28.41 33.07 64.82 27.75 34.86 29.51 38.41 31.56 6.76 22.35 25.13 10.16 12.07 14.94 12.19 9.72 16.91 28.10 12.91 17.33 19.59 61 IG39_AR1 ActiveIntergenicRegion 0 79.82 74.51 34.14 40.47 78.47 33.80 41.46 36.61 47.52 38.62 8.04 27.44 30.14 12.29 14.60 17.80 14.13 10.69 19.82 33.25 16.43 21.15 23.06 62 IG39_AR2 ActiveIntergenicRegion 0 14.82 12.20 6.74 2.95 31.22 11.00 11.47 8.07 8.85 10.70 1.93 0.00 17.20 1.62 8.22 2.97 6.60 8.31 3.19 9.22 3.31 2.08 11.75 63 IG39_SR2 SilentIntergenicRegion 0 11.46 21.44 11.81 13.19 30.61 12.15 21.42 9.18 12.64 12.70 4.86 9.24 16.88 4.83 5.22 5.73 8.44 8.14 10.67 17.41 0.52 6.54 8.02