Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CYLD Gene 0 109.94 105.56 35.68 41.88 138.40 72.76 70.47 70.54 105.08 32.50 161.65 142.68 137.75 144.62 82.57 127.58 147.32 44.58 25.76 68.09 44.01 76.63 53.24 2 311559 Transcript 0 2.07 2.31 1.22 0.70 10.19 6.96 3.77 4.54 12.36 1.95 36.81 15.65 47.47 26.15 9.08 25.50 39.69 1.51 1.78 4.11 8.56 9.33 8.84 3 427738 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 398568 Transcript 1 7.23 6.20 0.00 0.56 10.45 9.59 9.27 2.12 6.66 2.94 26.39 0.00 3.77 21.01 13.85 57.44 52.11 1.45 1.77 7.03 9.05 8.07 20.65 5 IG10_SR1 SilentIntergenicRegion 0 12.95 0.09 0.17 0.47 5.89 0.43 1.10 1.19 1.58 0.29 3.41 2.97 4.94 5.18 3.94 5.90 2.23 0.21 0.44 0.00 0.82 1.74 1.63 6 IG10_AR1 ActiveIntergenicRegion 0 38.57 0.00 0.00 0.00 10.70 0.41 2.65 3.46 3.98 1.15 15.89 10.10 11.46 13.53 2.90 19.15 7.70 0.00 0.00 0.00 0.00 0.00 0.33 7 IG10_AR2 ActiveIntergenicRegion 0 23.75 0.00 0.40 0.44 6.42 2.58 4.41 2.44 5.26 0.40 13.29 4.81 2.77 11.95 13.57 19.69 4.99 0.00 0.00 0.00 1.67 3.20 9.87 8 IG10_AR3 ActiveIntergenicRegion 0 12.76 2.64 0.86 0.99 1.52 0.00 0.72 0.00 1.94 0.00 6.90 4.21 0.00 11.24 7.61 19.12 4.10 0.00 0.00 0.00 2.62 4.45 8.33 9 IG10_SR3 SilentIntergenicRegion 0 25.94 1.11 1.85 2.07 6.52 4.36 1.44 1.36 4.70 0.00 8.65 9.62 2.96 9.78 9.85 17.28 4.75 0.00 0.00 0.00 2.41 4.49 6.97 10 ER1a ExonRegion 0 3.71 9.14 0.00 0.30 3.14 9.09 11.55 0.28 1.79 0.45 17.70 0.00 5.23 10.26 1.77 19.56 21.58 5.44 4.06 6.54 24.91 10.93 28.86 11 E1a_E2a KnownJunction 1 18.08 41.83 0.00 1.73 19.86 51.73 43.06 1.97 13.54 3.71 66.23 0.00 6.82 44.26 4.45 92.03 91.07 21.14 8.38 17.32 45.96 44.52 51.73 12 ER1b ExonRegion 1 14.82 39.32 0.82 1.36 11.15 43.71 40.60 3.17 8.65 4.40 69.91 0.00 13.29 44.12 3.87 91.64 71.52 18.48 10.09 24.82 43.71 35.07 58.73 13 ER1c ExonRegion 1 7.20 12.40 0.00 1.11 16.67 19.18 14.84 1.90 6.40 4.38 50.15 0.00 7.54 35.36 8.04 88.13 79.44 2.89 3.53 14.06 11.93 16.15 28.76 14 E1b_E2a KnownJunction 0 7.26 0.00 0.00 0.00 4.24 0.00 3.71 2.34 6.92 1.50 2.63 0.00 0.00 6.65 19.66 26.75 24.78 0.00 0.00 0.00 6.18 0.00 12.55 15 I1_AR1 ActiveIntronRegion 0 24.88 0.00 2.76 0.77 6.07 1.04 8.59 0.63 3.61 0.00 5.48 0.00 2.19 12.31 10.41 10.34 11.66 0.62 0.00 1.89 3.75 3.91 3.52 16 ER2a ExonRegion 1 15.74 29.36 8.09 4.67 14.01 27.80 24.44 12.81 23.71 6.25 104.74 18.62 37.46 65.72 19.40 86.41 95.19 18.82 5.89 25.40 31.32 20.21 37.59 17 E2a_E3a KnownJunction 1 0.00 0.00 0.00 1.30 0.00 2.90 1.94 3.20 13.74 1.32 63.44 0.00 26.95 42.67 4.45 11.11 75.83 2.07 0.00 2.56 17.30 11.39 3.93 18 E2a_E4a KnownJunction 1 0.00 0.00 5.35 1.90 12.48 8.40 4.28 11.79 23.84 6.18 97.76 6.00 21.10 29.25 13.35 33.15 79.10 11.48 0.00 23.01 34.60 0.00 3.84 19 ER3a ExonRegion 1 8.53 4.47 7.30 2.91 20.21 11.79 7.57 13.29 24.46 4.40 83.58 49.33 109.62 54.81 21.39 63.00 76.86 4.53 2.86 10.96 20.07 19.48 21.84 20 E3_Da NovelBoundary 0 31.49 16.25 18.89 5.33 3.65 0.00 15.59 17.09 6.08 3.22 0.00 13.95 13.64 0.00 0.00 7.95 7.57 0.00 0.00 5.88 0.00 0.00 8.71 21 E3a_E4a KnownJunction 1 2.96 9.14 0.00 0.00 40.92 22.32 6.23 9.78 31.42 3.49 70.86 44.56 147.72 56.33 27.69 78.87 84.71 0.00 7.81 5.31 13.96 25.11 26.63 22 ER4a ExonRegion 0 27.97 42.31 16.92 12.82 61.64 44.55 53.03 44.75 88.56 31.14 317.52 262.68 280.92 272.35 74.95 242.67 305.99 44.39 26.13 78.59 67.58 94.41 76.16 23 E4a_E5a KnownJunction 1 59.27 68.47 31.99 15.88 96.26 68.37 84.09 48.39 120.02 39.84 382.68 302.50 316.38 428.87 115.71 375.37 431.42 82.99 30.31 139.53 165.87 93.50 120.19 24 ER5a ExonRegion 1 58.21 38.73 21.56 20.52 86.49 61.28 71.63 56.13 112.55 38.81 368.84 253.45 320.55 398.10 99.47 339.75 366.19 95.00 43.90 94.84 123.68 119.85 121.85 25 E5a_E6a KnownJunction 1 126.02 35.59 26.17 23.81 123.09 64.68 85.41 66.62 144.30 47.09 349.25 245.03 304.69 366.24 63.66 296.50 392.33 80.09 30.02 101.18 95.20 122.34 109.35 26 ER6a ExonRegion 0 63.76 68.74 18.70 32.13 90.80 67.45 73.43 50.48 117.87 45.96 390.50 282.84 238.31 347.79 113.20 294.89 370.51 71.84 41.26 79.25 89.67 112.45 107.27 27 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.90 3.80 0.00 1.13 1.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 0.00 0.00 0.00 28 E6a_E8a KnownJunction 0 63.20 85.77 29.86 29.17 170.29 108.06 124.67 52.53 130.15 51.12 434.58 388.03 286.51 388.02 118.80 255.57 437.21 70.30 44.42 83.03 116.88 156.70 61.46 29 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 ER7a ExonRegion 0 0.94 0.23 0.00 0.00 0.00 1.83 3.09 0.96 3.43 1.15 3.01 0.00 0.52 3.07 0.97 0.00 0.73 2.46 0.00 2.60 0.00 0.00 0.65 31 ER8a ExonRegion 0 65.98 52.20 21.08 29.38 105.19 78.58 84.85 52.45 122.41 39.71 343.86 340.02 312.01 284.25 109.75 283.88 327.46 94.18 36.81 82.79 89.93 113.33 82.85 32 E8a_E9a KnownJunction 0 58.45 57.69 22.91 34.19 189.98 114.14 96.41 58.53 130.96 42.52 317.03 398.38 426.60 330.16 174.67 382.46 359.70 85.56 58.35 105.85 85.50 193.07 115.75 33 ER9a ExonRegion 0 59.91 46.30 25.80 42.55 143.74 100.86 84.56 78.09 143.90 40.78 464.54 313.98 268.09 353.41 164.95 418.87 393.91 87.48 50.15 102.49 94.33 169.51 130.24 34 E9a_E10a KnownJunction 0 69.49 45.78 13.87 29.63 95.93 54.40 66.99 79.44 133.56 38.20 308.13 353.22 266.54 233.21 89.62 390.15 265.08 71.63 64.28 86.29 87.35 116.10 79.64 35 E10_Aa NovelBoundary 0 31.71 3.35 4.08 2.90 19.69 11.47 1.94 20.33 16.06 3.76 27.27 12.60 55.19 14.72 4.45 15.12 23.38 14.47 4.80 15.28 6.05 14.21 3.41 36 ER10a ExonRegion 0 81.47 53.64 22.57 24.87 96.00 71.64 62.36 74.25 120.24 33.85 328.84 239.23 220.65 313.15 152.38 294.98 330.54 105.19 37.10 101.44 132.58 113.97 97.40 37 E10_Da NovelBoundary 0 66.53 9.60 4.35 5.49 19.95 0.00 26.01 21.11 23.67 10.58 36.90 13.35 28.24 56.39 10.75 73.57 47.97 20.15 8.85 5.50 9.02 13.17 15.37 38 E10a_E11a KnownJunction 0 120.24 67.55 26.29 29.93 53.74 62.75 50.35 29.61 90.62 32.80 284.23 105.48 120.61 333.92 190.62 224.30 291.72 91.45 35.01 89.74 119.35 99.99 98.59 39 I10_AR1 ActiveIntronRegion 0 19.49 2.88 4.17 4.10 9.07 1.82 13.00 9.67 10.59 4.11 22.09 23.20 18.43 22.95 3.43 20.78 30.11 4.25 1.13 3.59 2.96 12.31 8.32 40 ER11a ExonRegion 0 72.43 60.64 25.28 19.21 93.22 62.84 70.00 50.39 91.22 34.37 270.58 115.17 137.85 290.43 155.64 224.16 282.19 68.49 25.08 86.87 101.17 90.01 78.60 41 E11a_E12a KnownJunction 1 91.65 55.52 42.16 43.15 125.55 117.49 97.95 43.66 109.20 51.63 280.70 78.63 217.68 238.63 194.45 259.08 316.32 72.67 24.85 143.30 76.05 108.69 66.84 42 ER12a ExonRegion 0 85.15 64.62 36.80 41.96 130.62 95.00 78.63 66.40 108.06 46.86 337.86 182.54 297.16 283.95 176.65 216.86 278.41 50.79 27.23 107.82 42.24 115.08 82.68 43 E12a_E13a KnownJunction 1 127.87 102.88 34.30 39.92 67.91 78.48 117.61 65.27 87.70 44.91 303.18 120.79 374.49 174.94 195.32 207.47 199.44 33.66 16.57 101.69 11.00 71.03 70.85 44 ER13a ExonRegion 0 139.09 105.23 21.35 37.41 130.28 68.34 92.45 67.93 101.37 37.75 284.56 238.61 352.40 200.18 146.24 139.25 236.91 21.98 15.88 88.53 13.65 95.42 50.93 45 E13a_E14a KnownJunction 0 192.85 123.66 13.90 37.02 191.00 41.23 99.06 83.05 109.89 50.20 241.27 240.53 355.66 250.93 193.21 190.55 198.88 19.61 12.71 95.75 13.96 110.34 23.99 46 I13 Intron 0 12.34 7.12 8.30 5.04 12.40 4.77 11.09 12.79 11.29 5.73 7.69 30.92 29.58 13.59 5.41 6.76 7.70 1.60 1.33 6.94 1.12 10.84 3.16 47 I13_AR1 ActiveIntronRegion 0 12.62 7.30 8.60 5.26 12.77 4.98 11.49 13.27 11.78 5.97 7.78 31.83 30.00 13.89 5.49 6.96 7.83 1.61 1.29 7.17 1.10 11.06 3.30 48 E14_Aa NovelBoundary 0 273.16 30.59 24.01 7.26 47.79 2.90 19.70 27.77 25.98 8.81 10.21 44.11 40.42 24.78 8.90 23.41 13.93 7.21 4.80 11.38 5.37 20.33 8.71 49 ER14a ExonRegion 0 168.56 115.27 32.11 40.89 201.00 76.58 90.52 83.68 103.63 51.59 251.51 333.27 383.36 203.58 155.09 140.27 201.75 23.08 21.85 62.97 17.56 100.64 65.91 50 E14_Da NovelBoundary 0 17.41 12.17 19.69 11.49 12.56 0.00 10.02 17.83 7.64 6.45 9.79 12.30 20.13 17.01 4.45 12.56 3.55 1.53 0.00 15.60 2.66 5.14 0.00 51 E14a_E15a KnownJunction 0 137.14 113.07 24.36 31.23 244.82 120.61 118.49 80.67 126.13 44.54 262.80 362.97 324.49 171.52 114.22 152.10 193.45 27.23 13.18 54.90 20.26 139.37 59.58 52 I14_AR1 ActiveIntronRegion 0 22.64 7.74 12.68 6.19 14.44 4.85 13.18 14.10 11.58 4.34 16.84 21.67 21.63 9.43 7.21 7.46 14.92 1.74 1.42 7.66 1.96 15.36 3.93 53 ER15a ExonRegion 1 130.78 97.46 31.88 31.96 246.69 98.40 120.36 81.24 119.68 50.40 218.79 375.50 371.91 177.44 161.52 149.85 170.12 28.87 16.93 63.00 23.78 113.66 56.85 54 E15_Da NovelBoundary 1 6.67 8.75 8.04 1.47 8.66 2.90 8.08 1.89 9.20 1.64 24.16 57.47 80.51 9.48 5.93 8.46 22.07 1.70 0.00 3.26 3.15 14.14 8.71 55 E15a_E16a KnownJunction 1 246.56 127.35 54.61 35.56 288.03 82.91 175.81 79.93 133.36 61.92 198.52 481.06 341.21 260.52 204.22 206.53 175.88 21.18 22.12 71.08 37.25 133.43 46.35 56 I15 Intron 0 9.14 6.53 2.73 4.10 11.45 4.63 10.66 7.12 12.19 2.07 16.42 26.30 32.27 14.62 2.44 12.12 13.06 2.84 0.90 5.54 4.09 12.91 6.05 57 I15_SR1 SilentIntronRegion 0 7.06 2.66 4.67 6.64 11.30 5.47 11.42 7.09 13.02 3.26 11.70 30.60 44.18 14.83 3.27 7.99 6.32 1.72 0.75 4.81 1.86 16.94 5.76 58 I15_AR1 ActiveIntronRegion 0 3.53 2.37 1.63 4.77 8.03 9.17 8.61 6.91 11.32 3.63 25.45 47.62 64.10 20.84 5.32 8.92 6.60 1.85 3.19 3.19 2.20 16.67 0.00 59 I15_SR2 SilentIntronRegion 0 5.52 6.48 2.13 2.70 8.27 4.09 9.71 4.63 12.35 1.75 16.86 30.03 38.07 14.83 2.50 13.78 16.35 3.46 0.95 6.79 6.30 12.28 8.83 60 I15_AR3 ActiveIntronRegion 0 25.74 13.78 5.48 8.97 12.09 5.69 14.20 13.43 12.07 2.18 14.19 20.65 35.81 15.01 1.65 10.69 3.00 1.53 0.00 2.35 0.45 13.55 2.52 61 ER16a ExonRegion 1 204.87 110.33 45.98 50.85 194.34 69.49 106.10 97.35 134.73 58.56 263.19 432.62 312.75 225.20 168.84 191.22 200.78 24.51 21.15 70.71 32.48 145.92 66.73 62 E16a_E17a KnownJunction 0 191.59 107.09 34.09 40.72 197.37 76.09 93.76 75.95 118.43 45.58 268.49 201.82 192.03 197.13 125.10 179.53 157.64 35.94 36.71 57.72 30.09 98.77 94.92 63 ER17a ExonRegion 0 284.55 136.34 55.39 50.08 279.21 116.13 113.68 118.26 115.56 49.18 380.37 352.39 251.67 300.55 185.52 291.13 214.32 51.18 32.06 75.89 54.65 163.51 104.13 64 E17a_E18a KnownJunction 0 334.58 129.85 62.95 57.00 258.32 90.57 169.14 124.50 129.43 40.37 338.98 283.44 222.71 324.74 246.62 309.41 292.47 54.01 39.62 110.13 67.65 134.47 129.07 65 ER18a ExonRegion 0 220.72 84.85 53.35 46.84 174.19 78.01 102.76 97.10 122.16 42.45 396.08 224.40 184.13 295.40 215.18 287.92 288.18 70.46 40.90 79.01 110.17 103.34 111.96 66 E18a_E19a KnownJunction 0 391.11 93.54 87.64 70.79 169.02 108.91 110.63 125.60 162.76 41.42 412.10 170.16 215.57 407.80 217.81 311.11 388.87 95.26 65.60 130.07 147.40 155.90 152.46 67 ER19a ExonRegion 0 232.48 81.74 59.02 52.47 194.21 101.84 92.92 86.40 127.73 43.20 297.79 189.12 162.55 316.67 271.43 315.09 266.54 92.34 36.36 103.91 124.16 117.93 118.93 68 E19a_E20a KnownJunction 0 225.30 131.03 57.45 42.92 122.67 75.52 56.79 59.27 103.96 39.57 241.17 127.54 173.85 261.99 235.74 222.16 179.80 75.98 13.18 99.07 89.02 80.28 89.12 69 I19_AR1 ActiveIntronRegion 0 7.00 1.87 1.68 4.06 13.69 8.78 5.95 6.03 4.26 2.07 17.45 8.32 4.94 19.90 7.27 26.89 17.18 7.25 2.65 5.81 2.56 7.73 5.41 70 I19_SR2 SilentIntronRegion 0 25.27 14.23 7.12 5.48 24.46 7.03 10.72 9.87 11.69 1.09 20.08 2.46 12.51 19.31 6.27 17.15 15.27 6.90 2.50 6.37 2.92 8.76 4.45 71 I19_AR3 ActiveIntronRegion 0 23.66 18.65 8.00 4.10 15.87 8.12 15.12 9.56 6.53 0.00 19.92 9.62 14.47 13.74 9.20 21.87 15.09 5.87 0.84 1.49 2.88 3.90 2.69 72 E20_Aa NovelBoundary 0 65.20 41.64 3.40 5.89 16.30 17.83 12.41 19.92 16.26 4.14 11.85 0.00 6.33 27.72 5.07 7.86 18.23 9.87 4.24 5.56 3.15 11.57 8.45 73 ER20a ExonRegion 0 120.76 132.09 41.20 50.60 155.11 77.41 71.43 76.56 108.55 31.04 85.12 92.90 80.95 76.49 57.61 63.15 77.67 36.21 24.13 62.13 25.22 62.58 35.82