Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DNAJA2 Gene 0 74.33 110.45 79.59 46.69 68.77 72.90 56.96 55.04 71.02 87.54 205.12 203.35 106.51 212.07 143.04 151.24 141.01 69.31 58.90 86.22 92.54 89.28 83.04 2 317089 Transcript 0 148.47 224.51 192.73 110.22 166.22 153.26 133.05 129.11 166.12 208.80 498.83 492.48 251.78 531.24 358.29 370.08 350.92 167.75 141.33 210.24 221.82 215.65 198.69 3 IG33_AR8 ActiveIntergenicRegion 0 3.01 43.07 2.98 2.21 7.80 2.61 10.27 0.00 6.12 8.70 0.00 11.72 6.79 1.79 1.08 0.69 0.74 3.74 1.40 18.82 0.00 2.77 2.58 4 IG33_SR7 SilentIntergenicRegion 0 1.89 41.80 5.02 2.26 4.91 2.27 7.84 0.00 4.47 9.72 0.00 18.50 5.80 5.40 2.57 0.63 0.78 2.20 0.00 15.90 0.00 6.74 0.85 5 IG33_AR7 ActiveIntergenicRegion 0 4.57 34.26 21.05 9.78 8.23 6.79 11.16 2.17 9.47 17.52 2.56 6.21 9.00 5.71 4.41 1.88 4.17 26.95 8.62 28.25 0.99 3.25 3.04 6 IG33_AR6 ActiveIntergenicRegion 0 3.31 20.25 16.56 5.81 5.90 2.29 2.53 2.19 7.09 11.19 1.30 1.18 2.01 3.40 2.07 0.22 1.68 8.58 3.08 13.03 0.33 1.09 1.53 7 IG33_SR1 SilentIntergenicRegion 0 2.84 2.91 2.06 2.05 4.36 0.86 2.42 2.85 8.12 4.04 3.00 14.06 6.39 5.27 3.51 6.60 3.38 2.70 3.24 5.97 1.59 2.80 0.72 8 ER1a ExonRegion 0 28.74 45.11 31.48 11.54 28.40 79.55 35.28 16.64 36.39 44.15 120.29 40.11 32.60 113.55 78.39 98.00 103.69 55.13 21.14 61.99 100.29 35.13 60.94 9 E1a_E2a KnownJunction 0 18.00 28.61 64.72 20.44 11.46 21.01 0.00 43.83 71.56 100.62 369.30 123.04 66.07 161.99 92.34 59.64 244.60 48.46 17.69 121.31 219.87 33.49 33.21 10 I1 Intron 0 10.27 13.90 10.64 13.27 18.75 12.79 14.09 17.79 20.03 18.36 13.74 14.21 30.88 12.95 9.34 13.72 11.12 15.23 12.88 20.35 12.25 17.47 15.24 11 I1_SR2 SilentIntronRegion 0 8.47 6.29 6.48 0.71 12.61 3.93 6.24 9.05 7.65 18.62 7.92 0.00 6.48 13.69 4.28 11.04 4.56 16.54 10.92 4.86 17.21 13.99 11.75 12 I1_AR3 ActiveIntronRegion 0 15.09 20.32 14.90 19.94 27.81 18.41 20.66 24.93 28.55 25.04 18.29 20.36 46.43 17.06 11.50 17.37 14.14 19.37 18.45 27.23 14.23 24.95 20.20 13 E2_Aa NovelBoundary 0 25.19 21.64 20.90 10.89 58.91 23.17 24.16 15.03 36.57 29.82 17.69 18.76 61.68 11.89 8.90 7.52 25.62 7.05 17.04 20.52 5.81 11.63 0.00 14 ER2a ExonRegion 0 57.08 30.57 109.90 38.16 45.00 49.36 18.71 67.12 109.58 155.39 457.90 185.23 137.97 371.84 241.05 267.29 310.72 111.33 72.84 183.01 210.71 139.63 152.85 15 E2_Da NovelBoundary 0 10.00 14.14 4.11 19.91 16.13 0.00 23.49 9.69 14.47 21.41 7.42 13.80 6.66 9.65 0.00 4.36 4.77 6.01 9.60 6.14 0.00 8.63 7.34 16 E2a_E3a KnownJunction 0 43.79 39.66 157.71 61.00 67.83 43.55 25.48 92.33 135.76 174.36 384.52 155.45 182.29 480.73 357.13 438.35 237.68 159.31 86.78 196.67 185.70 215.11 263.52 17 I2 Intron 0 9.11 11.45 1.81 8.07 23.04 7.59 12.71 8.10 10.36 10.75 2.57 8.48 16.26 3.62 2.52 2.46 2.73 2.29 4.22 3.52 1.82 4.14 6.32 18 I2_AR1 ActiveIntronRegion 0 9.17 11.52 1.83 8.12 23.17 7.64 12.79 8.16 10.42 10.82 2.58 8.53 16.37 3.65 2.53 2.48 2.75 2.30 4.25 3.55 1.84 4.17 6.36 19 E3_Aa NovelBoundary 0 13.85 5.85 13.07 20.64 51.36 21.69 15.85 24.44 4.63 10.40 2.16 12.00 19.97 11.95 4.45 3.16 0.00 6.67 0.00 16.81 8.77 6.25 3.41 20 ER3a ExonRegion 0 85.57 138.02 157.86 83.85 130.04 171.09 106.25 117.13 169.83 205.51 521.40 377.51 276.25 489.61 319.80 331.29 372.03 166.58 114.50 189.68 237.42 198.07 178.77 21 E3a_E4a KnownJunction 0 172.77 198.71 213.59 117.60 206.11 163.20 132.36 153.99 206.51 275.17 585.52 502.36 480.49 818.06 485.57 534.82 566.99 274.50 208.01 282.51 284.86 359.07 252.59 22 ER4a ExonRegion 0 114.24 161.73 198.63 125.12 169.43 177.86 127.20 158.27 201.31 252.02 653.87 543.05 348.97 743.29 349.94 475.43 482.22 249.54 152.86 251.93 294.15 250.25 225.54 23 E4a_E5a KnownJunction 0 134.02 138.53 221.34 146.30 132.00 180.46 158.06 169.35 223.41 275.79 657.59 507.17 212.16 582.09 366.28 424.08 456.94 226.58 155.11 204.34 289.98 215.36 221.69 24 ER5a ExonRegion 0 91.74 139.06 222.10 134.62 151.12 170.80 113.69 183.09 214.26 257.93 594.06 585.22 410.10 644.19 364.43 435.11 424.58 229.02 173.77 260.35 286.07 223.20 248.63 25 E5a_E6a KnownJunction 0 154.55 214.96 263.30 150.70 360.61 218.06 189.99 204.47 223.32 287.23 527.98 627.05 480.49 844.55 425.61 533.28 504.44 173.69 199.16 304.82 241.86 235.50 272.48 26 E5a_E7a NovelJunction 0 0.00 0.00 1.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.95 13.95 0.00 0.00 10.51 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 27 ER6a ExonRegion 0 184.81 275.25 220.42 141.54 225.70 207.98 171.60 170.30 230.43 264.21 629.15 678.74 367.25 663.56 400.86 460.11 429.87 168.90 177.59 237.57 264.33 263.80 259.99 28 E6a_E7a KnownJunction 0 163.07 425.25 187.37 126.72 180.98 204.71 221.39 130.70 214.73 251.32 685.59 709.28 315.89 744.49 513.14 452.87 384.29 175.97 240.01 199.04 225.73 347.62 279.14 29 ER7a ExonRegion 0 225.66 441.08 218.31 139.94 227.72 175.08 167.45 144.06 192.75 220.51 601.17 776.80 290.59 583.80 461.72 424.15 374.46 166.59 197.14 232.05 231.83 302.01 237.08 30 E7a_E8a KnownJunction 1 290.42 522.60 296.77 167.14 230.82 192.39 221.26 151.48 177.43 215.24 556.67 1120.72 275.96 590.03 559.24 486.62 369.61 195.33 172.99 243.01 194.35 245.49 223.74 31 ER8a ExonRegion 0 309.94 406.35 293.90 171.32 284.59 217.61 218.00 168.01 184.99 242.70 556.75 671.68 217.90 578.06 474.29 450.11 327.77 198.43 207.65 266.87 216.60 298.32 238.21 32 E8a_E9a KnownJunction 0 413.33 561.61 400.07 226.81 361.21 315.56 339.30 213.09 220.05 310.36 557.09 736.14 173.69 592.45 574.82 397.33 360.54 240.84 195.21 324.95 277.20 289.14 217.08 33 ER9a ExonRegion 0 36.21 49.52 18.92 10.99 12.72 17.17 15.81 11.04 11.73 17.04 21.26 32.58 11.68 28.80 26.28 22.92 15.12 11.52 10.24 13.88 10.00 14.81 12.28