Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC002310.3 Gene 0 0.73 1.41 2.77 1.30 1.85 1.08 1.84 1.99 0.93 2.59 0.98 1.45 0.93 1.90 2.51 1.19 1.14 3.17 1.19 2.89 0.58 0.72 1.10 2 486926 Transcript 0 0.13 0.87 0.00 0.00 0.83 0.28 0.36 0.00 0.05 0.10 0.00 0.42 0.37 0.22 1.44 0.18 0.30 0.16 0.20 0.19 0.20 0.07 0.36 3 492040 Transcript 0 0.61 0.96 3.56 1.28 1.48 0.82 1.43 1.97 0.87 3.84 2.21 1.07 0.49 2.61 4.54 2.77 0.87 4.78 0.84 2.58 0.41 0.66 0.77 4 ER1a ExonRegion 0 0.00 2.03 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.38 0.00 0.00 0.00 0.00 1.93 0.00 0.00 0.31 0.00 0.00 0.00 0.00 0.00 5 ER1b ExonRegion 0 0.00 0.59 0.27 0.00 1.65 0.00 0.43 0.00 0.02 1.61 0.98 0.00 0.00 2.01 2.12 0.00 0.00 2.16 1.04 0.70 0.00 0.00 0.00 6 E1_Da NovelBoundary 0 5.93 5.53 9.11 7.39 4.24 12.72 6.18 21.81 24.10 30.27 2.47 0.00 0.00 4.83 0.00 17.94 8.70 31.26 28.05 5.82 13.47 0.00 15.62 7 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E1a_E3a KnownJunction 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 3.09 2.68 0.00 0.00 2.47 6.30 3.50 0.00 4.15 0.00 0.00 0.00 0.00 0.00 9 I1 Intron 0 23.16 27.65 25.09 15.56 88.09 34.30 43.21 37.37 26.79 43.50 6.52 14.44 15.28 14.65 16.91 9.74 10.34 22.81 28.41 24.31 10.94 20.28 28.59 10 I1_SR1 SilentIntronRegion 0 8.18 7.86 0.09 0.00 22.74 15.62 11.27 0.13 0.09 0.05 2.99 2.76 3.62 11.17 6.59 6.89 2.55 1.51 4.92 13.15 8.51 6.44 6.81 11 I1_AR1 ActiveIntronRegion 0 25.07 25.67 30.95 19.53 121.47 42.67 50.82 57.30 40.46 59.38 5.94 14.74 14.99 15.59 14.21 8.55 11.93 31.99 31.20 30.02 16.32 27.31 28.10 12 I1_SR2 SilentIntronRegion 0 24.13 30.60 22.22 14.44 66.17 29.61 40.00 21.84 16.33 35.17 6.52 15.15 16.84 13.54 18.66 11.02 9.75 16.56 24.86 19.92 5.86 13.95 28.55 13 I1_AR2 ActiveIntronRegion 0 17.35 44.31 25.65 8.62 47.51 21.07 39.94 28.39 20.59 22.51 15.18 19.73 19.30 18.98 37.62 13.50 10.34 16.72 57.13 22.04 6.61 24.11 56.95 14 E2_Aa NovelBoundary 0 24.89 37.56 80.81 61.06 44.06 24.64 26.54 45.63 75.98 72.37 20.27 0.00 87.66 33.43 50.68 14.10 49.65 132.82 133.09 97.60 29.16 28.78 60.52 15 ER2a ExonRegion 0 0.50 1.46 0.00 0.00 0.64 1.13 1.46 0.00 0.21 0.00 0.00 1.66 1.49 0.87 3.84 0.71 1.20 0.33 0.79 0.77 0.79 0.26 1.44 16 E2_Da NovelBoundary 0 12.45 64.46 129.21 59.93 30.05 37.31 50.35 45.55 53.70 66.64 14.53 0.00 0.00 26.31 41.66 23.24 12.44 112.38 59.95 26.59 24.83 27.00 33.97 17 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 E3_Aa NovelBoundary 0 114.46 262.65 138.20 67.32 74.28 48.21 74.81 113.90 106.31 152.41 54.96 29.86 55.03 84.58 80.23 39.22 21.32 148.03 144.29 93.38 53.62 74.89 119.17 19 ER3a ExonRegion 0 0.00 0.29 0.40 0.00 0.38 0.00 0.19 0.00 0.00 0.74 0.12 0.00 0.54 0.83 0.45 0.00 0.00 1.00 0.45 0.30 0.00 0.00 0.00 20 E3_Da KnownBoundary 0 33.78 14.87 15.85 12.25 8.06 12.72 6.18 7.64 16.03 12.09 2.26 0.00 0.00 0.00 0.00 0.00 8.79 59.57 13.18 2.68 2.59 0.00 10.93 21 ER3b ExonRegion 0 1.23 1.93 5.29 2.57 2.96 1.64 2.86 3.94 1.75 4.59 1.73 2.15 0.99 2.74 2.77 2.04 1.74 5.42 1.68 5.16 0.81 1.32 1.55