Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC092338.3 Gene 0 22.76 20.26 9.82 12.45 14.39 7.47 10.21 6.52 6.77 5.20 3.13 13.76 27.29 7.63 13.12 14.69 15.14 2.07 4.79 10.18 5.49 6.42 8.13 2 420133 Transcript 0 12.02 10.80 4.67 6.13 7.22 4.15 5.17 3.63 3.17 2.67 2.05 10.17 17.38 3.88 7.91 8.30 8.79 1.10 2.16 5.69 1.96 3.46 3.77 3 IG42 Intergenic 0 14.12 12.22 5.07 6.45 8.12 4.18 5.14 4.05 4.00 3.45 1.73 5.84 9.65 2.71 6.81 6.55 5.14 1.56 2.36 3.41 2.10 2.89 4.03 4 IG42_SR2 SilentIntergenicRegion 0 2.01 0.00 0.00 0.00 0.00 0.00 0.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.27 0.00 10.03 0.00 0.00 5 IG42_AR3 ActiveIntergenicRegion 0 10.92 6.99 1.68 5.59 8.59 4.41 5.61 2.66 3.80 4.11 0.44 3.62 16.98 2.12 5.61 6.13 5.67 0.21 3.29 3.41 2.27 0.96 1.68 6 IG42_AR4 ActiveIntergenicRegion 0 16.18 19.13 9.92 14.61 13.56 9.05 7.61 8.21 7.72 5.54 4.52 11.98 17.40 5.13 13.94 8.44 8.51 2.69 1.63 7.79 3.59 3.71 5.96 7 IG42_SR4 SilentIntergenicRegion 0 9.66 16.40 2.59 9.06 8.59 4.72 5.67 11.13 7.05 3.46 6.42 5.20 7.41 4.22 7.90 4.84 9.21 2.38 0.64 4.90 2.10 6.07 9.73 8 IG42_AR5 ActiveIntergenicRegion 0 19.77 18.24 8.19 11.76 11.50 5.82 4.45 8.18 5.16 5.75 1.44 6.28 3.76 5.25 10.65 4.43 9.87 1.20 2.98 2.38 1.24 3.11 3.29 9 ER1a ExonRegion 0 7.85 12.57 8.53 7.53 8.21 4.53 2.05 9.55 7.36 4.23 1.79 2.05 13.22 2.43 8.70 6.43 7.14 0.85 0.00 6.58 2.72 5.10 3.63 10 E1_Da NovelBoundary 0 55.71 24.34 9.46 10.49 33.02 10.62 8.26 8.63 10.50 9.05 0.00 0.00 13.64 9.89 8.90 22.90 8.88 3.94 3.95 0.00 0.00 8.51 7.68 11 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 I1 Intron 0 29.08 21.41 8.26 8.36 15.85 6.34 7.41 5.72 5.45 3.37 2.07 4.78 10.96 5.37 13.41 11.98 5.70 1.74 2.88 3.68 2.36 5.14 7.25 13 I1_SR1 SilentIntronRegion 0 31.57 23.25 8.97 9.07 17.21 6.88 8.04 6.21 5.92 3.66 2.24 5.19 11.56 5.83 14.56 13.01 6.19 1.89 3.13 3.99 2.56 5.58 7.87 14 E2_Aa NovelBoundary 0 77.57 28.35 13.96 29.07 54.84 31.69 29.50 6.41 18.03 3.33 10.16 13.95 6.82 7.12 4.45 29.74 9.44 4.48 8.66 7.99 5.68 7.35 15.11 15 ER2a ExonRegion 0 24.79 21.10 11.25 14.00 15.42 7.24 11.43 6.54 7.28 5.15 2.72 10.01 23.91 8.51 11.82 16.12 15.24 2.76 5.76 10.54 7.52 6.56 9.83 16 E2_Da NovelBoundary 0 26.08 35.98 8.57 17.41 21.56 0.00 8.08 11.58 6.97 3.92 2.32 17.71 26.30 9.12 14.09 29.22 7.85 1.62 9.41 6.52 0.00 5.51 3.93 17 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 I2 Intron 0 22.31 14.91 9.59 11.53 15.57 8.23 10.93 6.40 5.55 5.82 2.95 7.61 19.65 8.97 15.25 13.08 10.48 2.09 5.31 6.23 2.74 5.62 5.73 19 I2_SR1 SilentIntronRegion 0 22.74 15.39 9.79 11.77 15.82 8.44 10.84 6.72 5.62 5.98 2.89 7.18 19.65 8.62 14.81 12.69 10.07 2.09 5.48 6.11 2.79 5.49 5.72 20 I2_AR1 ActiveIntronRegion 0 15.33 6.94 6.25 7.71 11.54 4.81 12.58 1.10 4.45 3.30 4.06 15.02 19.93 14.97 22.87 19.89 17.64 2.15 2.51 8.40 1.82 7.93 5.95 21 E3_Aa NovelBoundary 0 32.52 35.19 16.56 24.84 37.01 10.28 25.84 7.02 5.32 17.43 7.48 24.76 39.93 7.30 24.85 49.47 27.12 16.33 8.28 18.09 11.43 14.88 3.41 22 ER3a ExonRegion 0 26.49 30.76 10.48 15.06 17.17 10.60 12.76 7.67 8.81 10.40 4.35 30.22 47.90 9.12 24.01 6.71 20.18 1.19 7.19 12.34 1.41 8.69 6.63 23 E3_Da NovelBoundary 0 35.19 21.77 28.65 45.35 46.86 19.53 48.71 11.17 16.20 10.29 17.21 38.56 76.78 21.84 53.28 38.96 33.94 0.00 8.00 25.25 3.09 8.57 3.67 24 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 I3 Intron 0 30.32 17.22 11.67 18.44 19.28 11.20 15.74 8.28 9.96 7.51 4.72 21.38 49.05 13.95 21.42 18.87 18.82 2.70 6.48 12.38 2.15 8.57 6.81 26 I3_SR1 SilentIntronRegion 0 30.37 17.24 11.69 18.46 19.30 11.21 15.76 8.30 9.98 7.52 4.73 21.42 49.13 13.97 21.45 18.90 18.85 2.70 6.49 12.40 2.16 8.58 6.82 27 E4_Aa NovelBoundary 0 17.04 25.78 8.78 18.11 0.00 16.69 20.76 6.74 15.10 9.21 7.48 12.00 56.17 9.59 15.45 15.72 13.84 4.23 4.80 9.27 0.00 3.12 7.60 28 ER4a ExonRegion 0 25.68 23.24 10.97 13.34 4.87 3.32 9.63 5.91 1.16 2.06 4.67 25.56 38.47 7.85 14.89 25.19 23.93 1.96 3.79 15.35 1.34 6.32 8.84 29 E4_Da NovelBoundary 1 21.56 15.79 28.62 24.54 33.96 2.90 15.68 11.38 8.01 15.47 2.37 12.60 138.63 18.84 36.10 7.35 16.36 4.68 3.67 18.28 5.68 7.78 4.35 30 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 0.00 0.00 0.00 31 I4 Intron 0 28.86 17.87 11.39 19.40 16.84 11.23 13.47 9.93 8.61 10.32 8.11 20.77 39.31 11.42 21.43 21.57 25.27 4.93 8.13 13.03 4.62 7.74 6.66 32 I4_AR1 ActiveIntronRegion 0 32.38 25.68 15.80 30.13 18.01 9.22 14.93 9.08 11.24 11.96 9.95 22.74 51.90 15.59 23.15 19.06 32.04 5.65 9.52 16.05 3.93 8.27 5.73 33 I4_SR2 SilentIntronRegion 0 29.39 15.40 11.17 20.30 12.28 14.44 14.65 14.29 9.70 11.98 8.85 23.35 36.61 13.13 26.17 31.48 26.81 7.69 11.41 16.91 7.01 8.37 9.40 34 I4_AR3 ActiveIntronRegion 0 32.35 15.83 11.42 10.16 26.02 13.25 13.25 7.87 6.65 8.54 7.52 18.08 42.90 7.04 17.43 15.28 23.85 2.05 3.98 8.27 3.67 7.53 6.94 35 I4_SR3 SilentIntronRegion 0 14.56 10.40 1.73 6.74 13.32 3.91 7.54 3.05 2.62 4.87 2.74 13.77 11.98 3.97 10.65 9.77 7.80 0.00 2.27 2.52 1.05 5.44 0.70 36 E5_Aa NovelBoundary 0 27.26 15.00 0.00 12.35 11.97 5.79 19.61 7.19 6.34 9.62 0.00 5.70 29.87 2.12 26.21 7.35 25.25 1.70 4.80 8.50 2.78 7.23 7.09 37 ER5a ExonRegion 0 23.37 9.52 0.79 5.24 19.35 11.69 10.69 1.11 3.91 2.18 4.93 23.67 32.95 6.98 11.73 20.21 12.63 0.54 2.71 6.37 4.68 4.43 4.99 38 IG43 Intergenic 0 67.88 40.03 32.16 29.01 38.06 19.74 22.29 20.79 16.60 18.43 19.75 26.32 54.18 27.50 53.56 49.07 52.78 12.45 13.69 18.70 7.55 12.70 16.82 39 IG43_SR1 SilentIntergenicRegion 0 54.13 21.36 14.78 14.01 28.65 11.65 16.94 10.97 9.71 8.66 6.19 19.49 34.15 10.52 26.36 24.25 25.63 5.16 8.12 8.19 4.08 7.81 8.24 40 IG43_AR2 ActiveIntergenicRegion 0 104.34 30.83 45.26 34.10 43.92 25.20 26.87 30.28 24.57 28.82 16.97 27.50 87.33 23.18 66.90 65.96 64.75 18.04 20.38 29.25 9.85 18.31 18.72 41 IG43_AR3 ActiveIntergenicRegion 0 65.36 45.78 54.36 55.76 51.54 32.24 22.33 36.99 27.26 22.29 15.82 22.47 53.69 30.60 62.37 62.21 57.43 17.43 12.75 21.97 7.29 12.05 19.37 42 IG43_SR3 SilentIntergenicRegion 0 39.03 35.04 29.91 25.14 38.78 23.41 24.14 15.79 13.74 17.44 8.53 21.11 40.57 14.87 41.55 37.78 42.29 10.76 10.23 15.79 7.51 6.10 17.55 43 IG43_AR4 ActiveIntergenicRegion 0 95.45 80.21 46.96 42.34 46.26 23.26 29.56 28.42 21.43 29.55 55.08 44.63 83.24 67.16 99.82 86.25 100.96 21.32 23.25 32.54 13.02 23.35 30.11