Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SULT1A1 Gene 0 44.32 9.91 33.75 6.30 21.28 5.93 9.27 35.45 37.21 55.34 1.81 1.75 3.49 12.30 7.39 2.61 5.08 7.41 30.74 3.40 1.93 17.83 8.82 2 350842 Transcript 0 0.00 0.00 0.07 0.00 0.00 0.00 0.00 3.16 12.56 5.96 0.00 0.00 0.00 0.19 0.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 395609 Transcript 0 26.38 7.49 26.69 0.66 3.17 1.53 0.35 21.57 23.03 44.56 0.00 0.07 3.33 9.28 1.72 0.00 7.94 4.66 30.85 0.73 0.00 2.71 0.51 4 314752 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 395632 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 395140 Transcript 0 46.02 19.11 52.68 7.83 14.69 6.47 12.36 42.86 54.79 80.62 13.05 5.76 5.25 30.07 32.05 12.68 21.84 20.39 44.93 21.68 13.37 16.04 18.89 7 395607 Transcript 0 0.00 0.00 3.02 0.00 3.90 0.00 2.25 2.46 0.00 6.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.15 0.00 0.00 8 434167 Transcript 0 32.51 9.10 18.41 1.14 10.19 1.23 2.10 23.19 24.41 37.76 0.00 0.79 0.78 6.01 3.22 0.66 2.21 5.11 27.76 3.10 0.49 2.34 4.30 9 ER1a ExonRegion 0 0.00 0.00 0.14 0.00 0.00 0.00 0.00 0.00 0.04 0.47 0.00 0.00 0.00 0.38 0.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 E1_Ab KnownBoundary 0 6.67 0.00 0.00 0.00 0.00 0.00 0.00 2.18 3.10 7.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER1b ExonRegion 0 8.45 3.92 15.27 0.51 1.29 0.22 0.64 10.37 11.36 25.29 0.00 0.00 0.81 5.36 2.08 0.00 1.13 2.82 11.40 0.00 0.00 0.25 0.00 12 E1a_E2a KnownJunction 0 13.78 16.18 41.78 4.13 0.00 0.00 2.08 36.80 45.28 88.05 0.00 0.00 6.82 26.25 5.19 0.00 8.13 1.70 40.66 0.00 0.00 0.00 0.00 13 ER2a ExonRegion 0 16.90 13.58 35.73 2.65 0.45 0.39 0.00 26.00 34.43 59.62 0.00 4.45 0.73 17.61 1.88 0.00 9.58 3.31 43.88 0.00 0.00 0.38 0.00 14 E2_Da NovelBoundary 0 25.19 2.76 12.77 0.00 3.65 2.84 0.00 14.99 18.63 24.79 0.00 0.00 0.00 9.59 5.93 0.00 0.00 0.00 8.66 0.00 0.00 0.00 0.00 15 E2a_E3a KnownJunction 0 6.96 6.25 33.65 1.27 3.14 2.61 0.00 16.80 18.17 27.18 0.00 0.00 0.00 10.18 0.00 0.00 9.44 6.26 24.57 0.00 0.00 2.33 0.00 16 E2a_E7b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.33 25.09 11.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 I2 Intron 0 8.63 5.54 7.73 0.36 4.00 0.36 1.15 12.55 14.57 21.25 0.00 0.32 1.78 5.35 2.57 0.34 1.26 1.53 16.60 0.26 0.02 0.32 0.21 18 I2_SR1 SilentIntronRegion 0 6.74 5.61 7.53 0.25 4.26 0.28 1.00 11.48 13.32 18.74 0.00 0.36 2.06 5.65 2.45 0.23 1.20 1.70 14.93 0.29 0.00 0.28 0.18 19 I2_AR1 ActiveIntronRegion 0 1.72 3.70 5.38 0.37 2.03 0.50 0.72 9.49 13.96 17.08 0.00 0.32 1.12 3.02 2.42 0.54 1.49 0.50 21.92 0.19 0.00 0.75 0.00 20 I2_SR2 SilentIntronRegion 0 8.53 6.51 4.95 0.00 2.78 0.00 1.63 8.10 9.25 13.02 0.00 0.00 3.52 3.14 1.01 0.00 1.36 1.65 22.25 0.60 0.00 0.00 0.00 21 I2_AR2 ActiveIntronRegion 0 21.28 6.64 10.91 0.86 4.70 0.67 2.00 20.18 21.56 36.45 0.00 0.22 0.93 6.21 3.52 0.72 1.40 1.59 19.78 0.17 0.13 0.25 0.53 22 E3_Aa NovelBoundary 0 3.63 2.96 11.09 0.00 0.00 0.00 0.00 13.55 14.06 25.71 0.00 0.00 0.00 2.12 0.00 0.00 0.00 0.00 31.34 3.26 0.00 0.00 0.00 23 ER3a ExonRegion 0 45.79 8.74 19.73 0.06 3.20 0.45 0.71 26.35 27.90 61.94 0.00 0.15 6.65 8.38 3.43 0.00 6.45 3.06 37.13 1.47 0.00 3.10 1.01 24 E3_Ab KnownBoundary 0 13.48 3.16 9.67 0.00 0.00 0.00 0.00 12.40 9.06 22.83 0.00 0.00 0.00 0.00 4.45 0.00 0.00 0.00 8.28 0.00 0.00 0.00 0.00 25 E3_Ac KnownBoundary 0 26.97 3.09 12.06 1.63 19.10 0.00 7.91 12.65 13.37 44.43 0.00 0.00 0.00 2.77 0.00 0.00 9.26 1.62 29.93 0.00 0.00 8.76 0.00 26 ER3b ExonRegion 0 27.51 7.63 18.23 0.00 13.04 3.67 6.95 23.98 18.06 46.59 0.00 0.00 0.00 2.84 1.81 0.00 6.60 1.85 31.85 0.00 0.00 6.25 0.00 27 ER3c ExonRegion 0 95.59 10.54 25.04 7.29 62.31 25.55 41.07 29.88 28.34 41.89 0.00 1.48 3.66 8.48 3.23 1.44 6.76 2.55 30.52 0.00 0.00 46.97 24.25 28 E3_Da NovelBoundary 0 6.96 2.57 19.48 0.00 12.14 0.00 2.25 29.61 30.35 36.45 0.00 0.00 0.00 4.83 0.00 0.00 0.00 2.45 22.68 0.00 0.00 0.00 0.00 29 E3a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 E3a_E4c KnownJunction 0 33.27 0.00 17.95 3.60 12.99 0.00 8.79 18.36 23.00 13.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.80 0.00 0.00 3.12 0.00 31 I3 Intron 0 9.79 3.02 13.26 1.01 9.72 1.21 1.09 12.33 16.10 18.62 0.00 0.59 2.55 7.51 2.62 0.49 1.09 3.03 23.66 0.00 0.36 2.75 0.97 32 I3_SR1 SilentIntronRegion 0 10.67 4.78 17.16 0.68 8.98 1.85 1.33 14.69 21.61 22.94 0.00 1.20 3.89 8.08 4.52 1.00 1.11 4.32 26.72 0.00 0.00 4.19 0.99 33 I3_AR2 ActiveIntronRegion 0 9.05 1.34 9.61 1.34 10.56 0.60 0.87 10.17 10.89 14.62 0.00 0.00 1.27 7.04 0.79 0.00 1.09 1.81 20.96 0.00 0.73 1.37 0.97 34 E4_Aa NovelBoundary 0 19.93 15.85 26.85 5.33 28.52 5.56 2.16 32.53 36.28 61.30 0.00 0.00 0.00 15.42 0.00 0.00 8.98 43.03 16.75 12.53 0.00 3.00 0.00 35 ER4a ExonRegion 0 20.53 8.12 32.85 5.45 9.70 2.27 3.73 29.25 39.06 64.69 2.19 1.23 1.65 14.38 3.34 3.52 4.89 11.35 30.44 4.64 3.54 1.58 6.24 36 E4_Da KnownBoundary 0 34.82 3.35 34.62 2.06 4.24 2.27 2.12 32.37 51.65 57.81 0.00 0.00 6.33 4.94 0.00 3.85 0.00 11.15 22.21 0.00 0.00 0.00 4.10 37 E4a_E4c KnownJunction 0 0.00 0.00 3.02 0.00 3.90 0.00 2.25 2.46 0.00 6.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.15 0.00 0.00 38 ER4b ExonRegion 0 46.02 19.11 52.68 7.83 14.69 6.47 12.36 42.86 54.79 80.62 13.05 5.76 5.25 30.07 32.05 12.68 21.84 20.39 44.93 21.68 13.37 16.04 18.89 39 E4_Ab KnownBoundary 0 140.40 50.98 143.22 45.48 90.66 28.00 80.60 84.41 75.52 155.32 61.86 18.61 13.64 92.88 70.96 60.24 88.17 83.45 126.31 76.38 36.57 70.60 67.78 40 E4_Ac KnownBoundary 0 6.82 6.71 14.01 0.00 4.33 0.00 0.00 19.80 31.37 19.10 0.00 0.00 0.00 0.00 15.95 4.27 0.00 2.57 9.60 0.00 0.00 0.00 0.00 41 ER4c ExonRegion 0 119.07 51.10 115.86 19.04 43.50 16.92 46.04 90.33 78.37 132.45 31.67 7.68 14.98 61.61 87.04 44.58 56.54 75.82 111.38 43.45 14.72 43.96 57.69 42 ER4d ExonRegion 0 46.65 13.40 61.44 7.56 13.95 4.43 5.56 60.27 50.12 86.11 4.35 1.81 1.21 19.27 15.77 5.49 9.75 22.72 42.82 5.23 4.71 37.12 17.85 43 E4_Db NovelBoundary 0 2.82 3.09 1.21 0.00 0.00 0.00 0.00 13.18 15.77 11.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.34 0.00 0.00 0.00 3.67 44 E4b_E5a KnownJunction 0 12.45 0.00 0.00 5.26 25.47 0.00 3.75 18.24 0.00 95.84 0.00 0.00 6.01 14.36 4.70 0.00 0.00 9.45 31.91 0.00 0.00 42.80 16.13 45 E5_Aa NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 2.16 7.31 0.00 18.91 0.00 0.00 0.00 2.12 4.45 0.00 0.00 2.32 0.00 0.00 0.00 0.00 0.00 46 ER5a ExonRegion 0 60.56 10.33 39.73 7.61 70.19 20.59 23.45 42.53 39.48 79.51 0.00 1.44 2.27 14.58 2.30 0.00 2.44 5.75 40.10 0.00 0.00 22.60 13.66 47 E5_Da NovelBoundary 0 12.74 5.79 9.40 0.00 7.13 0.00 0.00 12.40 19.59 10.83 0.00 0.00 0.00 7.42 8.90 0.00 0.00 0.00 13.08 0.00 0.00 0.00 0.00 48 E5a_E6a KnownJunction 0 142.03 17.96 72.03 4.59 132.09 55.54 71.81 48.39 51.62 70.86 0.00 0.00 6.82 19.60 13.35 0.00 9.54 9.33 80.10 0.00 0.00 26.70 32.52 49 E6_Aa NovelBoundary 0 14.22 6.58 10.88 0.00 0.00 9.37 4.50 18.32 20.98 24.69 0.00 7.65 0.00 4.89 0.00 0.00 0.00 2.40 23.44 0.00 0.00 0.00 0.00 50 ER6a ExonRegion 0 77.90 8.47 47.69 8.26 40.60 17.46 27.76 35.72 43.44 55.92 0.00 0.00 3.78 17.40 8.64 0.00 2.02 3.34 35.04 0.00 0.00 31.42 9.17 51 E6_Da NovelBoundary 0 9.48 5.85 2.75 0.00 8.66 5.74 8.26 21.48 26.04 13.65 0.00 0.00 0.00 0.00 0.00 0.00 4.11 6.47 41.79 0.00 0.00 3.12 0.00 52 E6a_E7b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 53 I6 Intron 0 12.12 4.40 5.93 0.94 4.96 1.13 0.82 7.56 11.66 14.53 0.00 0.00 0.00 1.62 0.69 0.46 1.02 0.43 13.28 0.00 0.00 1.29 0.45 54 I6_SR1 SilentIntronRegion 0 12.18 4.42 5.96 0.95 4.99 1.14 0.82 7.60 11.73 14.62 0.00 0.00 0.00 1.63 0.69 0.46 1.03 0.43 13.36 0.00 0.00 1.30 0.46 55 E7_Aa NovelBoundary 0 52.16 6.31 9.49 3.73 35.14 7.61 6.76 33.35 26.50 30.11 0.00 0.00 0.00 7.77 9.64 0.00 0.00 16.46 56.66 5.56 0.00 2.69 0.00 56 ER7a ExonRegion 0 32.51 9.10 18.41 1.14 10.19 1.23 2.10 23.19 24.41 37.76 0.00 0.79 0.78 6.01 3.22 0.66 2.21 5.11 27.76 3.10 0.49 2.34 4.30 57 E7_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58 ER7b ExonRegion 0 89.62 9.91 61.50 11.40 40.35 3.75 6.88 65.06 86.02 85.62 0.00 1.44 5.21 13.21 7.60 0.00 0.00 3.92 46.85 1.25 0.00 33.80 10.07 59 E7_Da NovelBoundary 0 0.00 0.00 9.17 0.00 0.00 0.00 0.00 3.57 1.45 6.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.46 0.00 0.00 0.00 0.00 60 E7a_E8a KnownJunction 0 128.39 3.29 77.17 19.31 22.33 10.28 7.99 58.82 83.62 103.34 0.00 0.00 12.66 31.31 0.00 0.00 0.00 8.75 65.41 0.00 0.00 61.29 23.39 61 E8_Aa NovelBoundary 0 3.70 3.16 4.73 0.00 4.16 0.00 0.00 8.09 1.68 13.19 0.00 0.00 0.00 2.24 0.00 0.00 4.39 1.62 12.99 0.00 0.00 0.00 4.35 62 ER8a ExonRegion 0 70.85 11.56 51.79 12.25 30.95 10.66 13.03 43.43 58.73 67.09 1.00 0.00 4.39 11.51 5.89 0.00 0.00 2.22 37.22 0.00 0.00 50.29 14.53 63 E8_Da NovelBoundary 0 13.63 0.00 8.25 2.06 11.54 0.00 4.46 7.64 2.98 14.21 0.00 0.00 5.84 7.42 0.00 0.00 3.83 4.10 30.78 0.00 0.00 0.00 0.00 64 E8a_E9a KnownJunction 0 49.42 3.03 0.00 3.16 46.26 5.62 20.27 32.61 0.00 65.92 8.05 0.00 0.00 14.30 0.00 0.00 0.00 0.00 4.80 0.00 0.00 34.05 20.40 65 I8 Intron 0 12.15 2.18 3.55 0.59 6.25 0.36 1.55 8.27 5.37 15.80 0.00 0.00 0.75 3.57 2.06 0.00 0.96 2.41 9.60 0.00 0.00 1.83 0.86 66 I8_SR1 SilentIntronRegion 0 13.13 2.28 3.58 0.49 5.85 0.00 1.74 7.50 3.88 14.38 0.00 0.00 0.54 3.18 1.57 0.00 1.19 2.23 8.66 0.00 0.00 1.86 1.05 67 I8_AR1 ActiveIntronRegion 0 8.07 1.78 3.52 1.08 8.14 1.95 0.73 11.88 12.11 22.45 0.00 0.00 1.71 5.38 4.29 0.00 0.00 3.25 14.00 0.00 0.00 1.71 0.00 68 ER9a ExonRegion 0 79.33 9.06 31.40 13.01 43.98 10.43 13.88 46.57 38.29 55.64 1.11 1.48 5.16 10.51 4.62 1.36 0.00 5.76 30.46 0.60 0.39 36.11 14.42 69 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 70 ER10a ExonRegion 0 44.34 10.72 31.82 11.21 24.52 5.24 9.98 51.38 44.12 48.48 0.00 4.29 7.56 9.25 5.45 2.87 3.50 2.89 23.76 1.93 1.46 26.51 6.36 71 ER10b ExonRegion 0 2.96 0.41 0.00 0.00 1.25 0.00 0.00 0.92 0.74 0.31 0.00 0.00 0.00 0.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.14 0.00