Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NPIP Gene 0 31.71 18.19 40.46 22.55 9.77 16.99 8.99 27.17 37.85 33.73 8.44 2.92 3.43 10.06 11.38 11.33 8.25 30.33 14.03 17.06 16.03 9.69 26.60 2 472413 Transcript 0 6.42 5.72 13.52 9.67 5.70 7.18 3.68 11.14 15.06 14.23 5.32 0.77 1.11 3.78 3.38 6.25 5.82 17.98 6.59 8.71 6.26 4.33 8.40 3 424549 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 328085 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 432470 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 Ix Intron 0 2.30 0.83 6.69 6.89 3.27 7.46 4.85 10.13 16.48 15.53 6.03 3.63 2.62 8.37 5.51 6.05 7.16 22.18 19.01 11.83 12.55 3.67 17.13 9 Ix_SR1 SilentIntronRegion 0 2.31 0.83 6.72 6.92 3.28 7.50 4.87 10.19 16.56 15.62 6.06 3.65 2.63 8.42 5.54 6.08 7.20 22.30 19.11 11.90 12.62 3.69 17.22 10 ER2a ExonRegion 0 0.00 0.00 0.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.06 0.00 0.00 0.00 0.00 0.00 11 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER3a ExonRegion 0 0.00 0.00 0.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.75 0.00 0.00 0.79 0.00 0.00 13 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER4a ExonRegion 0 0.00 0.00 0.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.05 0.00 0.00 0.62 0.00 0.00 15 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER5a ExonRegion 0 0.00 0.00 0.00 0.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.41 0.00 0.00 0.00 17 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER6a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.54 0.00 0.00 0.00 0.00 0.00 0.00 0.18 0.00 0.00 0.00 19 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER7a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.05 0.00 0.00 0.00 0.00 0.00 0.20 0.00 0.00 0.00 0.00 0.28 0.00 0.00 0.00 0.00 0.00 21 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER8a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.50 0.00 0.00 0.00 0.00 0.00 23 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER9a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.92 0.00 0.00 0.00 0.00 0.00 25 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 ER10a ExonRegion 0 0.00 0.00 1.72 5.68 0.00 0.00 0.00 3.67 9.67 8.92 0.00 0.00 0.00 0.00 0.00 1.05 0.25 29.36 1.12 0.00 0.96 0.73 0.00 27 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER11a ExonRegion 0 0.00 0.27 5.05 5.05 0.70 0.00 0.00 4.87 9.26 10.51 0.00 0.00 0.00 0.21 0.00 0.20 0.38 16.13 2.50 0.00 2.27 0.68 1.53 29 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 ER12a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 ER13a ExonRegion 0 0.00 0.00 0.00 0.12 0.00 0.00 0.00 0.00 0.00 0.34 0.55 0.00 0.00 0.23 0.00 0.00 0.00 0.56 0.00 0.00 0.45 0.00 0.00 33 E13a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 ER14a ExonRegion 0 0.00 0.00 0.48 0.37 0.00 0.00 0.00 0.00 0.00 0.00 0.31 0.00 0.00 0.35 0.00 0.35 0.00 0.48 0.00 0.00 0.00 0.00 0.00 35 E14a_E15a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 ER15a ExonRegion 0 1.92 0.12 0.00 0.00 0.00 0.00 0.39 0.00 0.55 0.00 0.00 0.00 0.00 0.00 0.00 0.49 0.00 0.00 0.28 0.00 0.00 0.00 0.00 37 E15a_E16a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 ER16a ExonRegion 0 8.70 2.23 0.00 0.00 0.00 0.00 0.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.80 0.00 0.00 0.00 0.00 39 E16a_E17a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 ER17a ExonRegion 0 23.44 17.76 1.31 2.93 5.72 28.67 11.24 0.25 2.92 1.01 0.47 0.00 0.00 0.38 0.59 2.04 0.00 8.39 0.69 1.53 0.00 1.08 4.86 41 E17a_E18a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 ER18a ExonRegion 0 6.32 7.57 57.23 34.35 4.55 13.59 3.12 44.16 69.22 64.63 18.08 0.00 0.00 17.33 9.91 18.07 15.62 50.14 31.23 47.53 38.40 28.84 29.76 43 E18a_E19a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 ER19a ExonRegion 0 44.36 54.18 121.37 98.96 46.60 102.42 36.01 98.72 154.58 159.71 49.82 7.09 7.63 29.38 22.94 32.89 36.78 206.82 56.80 70.16 64.85 43.90 66.83 45 E19a_E21a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 46 I19 Intron 0 16.94 11.69 23.98 29.53 20.21 32.55 17.68 31.07 34.64 31.98 14.60 5.53 10.81 9.15 10.69 19.43 13.39 58.59 38.60 39.21 43.21 15.15 47.17 47 I19_AR1 ActiveIntronRegion 0 5.03 2.27 20.15 18.73 7.10 37.92 4.81 18.00 26.23 22.21 15.66 3.49 7.56 8.18 4.94 21.18 15.68 85.18 55.63 34.19 41.88 12.82 42.68 48 I19_SR1 SilentIntronRegion 0 25.03 18.09 26.61 36.90 29.12 28.98 26.43 39.98 40.41 38.65 13.90 6.92 13.03 9.82 14.61 18.28 11.87 40.68 27.13 42.68 44.19 16.76 50.29 49 ER20a ExonRegion 0 9.84 4.94 0.00 0.06 0.00 1.95 1.26 0.00 0.04 0.00 46.14 22.88 31.19 90.54 80.77 23.92 89.70 5.98 51.22 101.82 56.74 34.53 30.86 50 E20a_E22a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 ER21a ExonRegion 0 178.30 152.23 365.84 248.38 176.04 147.15 99.44 304.97 371.25 338.26 149.06 24.47 36.10 106.97 104.98 201.00 185.46 421.78 176.75 237.48 148.26 102.17 241.42 52 E21a_E22a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 53 E22_Ab NovelBoundary 0 678.19 418.28 858.19 1097.70 489.64 655.25 464.02 682.20 832.43 877.23 306.50 199.57 235.86 203.60 160.95 343.84 324.82 767.43 470.23 859.49 252.11 418.90 758.28 54 ER22a ExonRegion 0 49.10 17.90 193.00 154.01 23.28 23.66 15.62 214.67 251.22 229.27 22.04 13.42 39.87 118.72 94.87 71.33 35.32 293.05 63.39 72.55 35.04 74.80 85.75 55 ER22b ExonRegion 0 16.17 9.30 59.03 62.68 23.45 46.51 18.37 70.74 82.88 76.81 9.16 1.13 5.87 26.19 18.16 29.02 3.44 89.84 36.27 13.79 4.56 41.08 39.53 56 E22a_E23a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 57 ER23a ExonRegion 0 40.81 41.87 73.78 57.42 12.15 77.61 16.44 79.65 74.30 54.40 1.62 4.20 11.82 20.33 16.83 48.33 0.69 87.73 49.69 16.19 0.20 15.83 68.45 58 E23a_E24a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 59 ER24a ExonRegion 0 125.72 58.72 11.90 7.09 19.45 27.68 23.63 19.32 22.43 17.03 0.00 0.00 0.00 0.00 0.00 1.05 0.00 2.94 0.00 1.16 0.78 0.00 1.30 60 E24a_E25a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 61 I24_AR2 ActiveIntronRegion 0 10.58 4.07 4.08 19.08 12.04 15.89 8.83 11.81 14.00 19.31 0.97 8.66 1.56 2.17 5.32 12.88 6.60 15.71 8.49 7.09 11.75 9.03 22.51 62 I24_SR2 SilentIntronRegion 0 6.88 2.46 5.11 6.84 9.93 11.85 2.60 6.48 11.23 9.46 0.00 2.91 0.00 0.06 0.61 2.23 1.65 13.01 19.36 3.93 11.32 14.95 14.68 63 I24_AR3 ActiveIntronRegion 0 4.51 3.71 5.35 11.71 7.51 9.14 7.41 9.27 15.79 12.15 0.52 2.29 1.60 1.71 1.41 1.76 3.90 15.93 8.09 4.08 4.33 4.02 4.83 64 ER25a ExonRegion 0 151.08 84.15 3.45 4.71 0.00 6.57 19.91 2.50 2.44 3.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.50 0.00 0.99 0.73 0.00 1.39 65 E25a_E26a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 66 ER26a ExonRegion 0 74.08 23.60 20.83 4.36 0.00 8.69 15.95 3.94 10.31 6.98 0.00 8.94 0.00 1.84 6.56 2.14 0.00 2.33 2.66 6.77 0.54 3.04 28.45 67 E26a_E27a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 68 ER27a ExonRegion 0 57.15 51.86 79.04 17.49 6.54 31.48 11.62 17.96 36.23 14.30 0.00 0.12 0.00 25.67 39.73 10.90 4.49 12.52 0.71 21.87 1.96 9.26 86.47 69 E27a_E28a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 70 E27a_E29a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 71 ER28a ExonRegion 0 9.62 12.61 25.65 7.94 2.75 22.61 5.37 17.14 30.56 17.63 0.00 5.57 0.00 10.46 21.14 8.58 0.00 27.90 29.35 4.86 1.54 18.84 29.32 72 E28a_E29a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 73 ER29a ExonRegion 0 208.59 92.21 285.01 115.17 39.11 58.89 39.93 148.25 211.18 175.89 32.67 20.84 20.84 50.95 75.85 49.44 25.58 61.29 59.29 85.14 108.53 40.64 185.81 74 ER29b ExonRegion 0 0.00 4.07 11.03 8.86 2.68 12.84 3.97 4.32 1.85 4.59 1.93 0.00 0.00 0.00 0.00 0.00 0.00 3.70 0.00 0.00 0.00 0.00 0.00 75 ER29c ExonRegion 0 0.00 1.69 3.17 0.45 1.56 7.03 2.21 0.00 0.00 1.15 1.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 76 ER29d ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00