Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NFATC2IP Gene 0 219.50 126.52 109.35 84.09 187.66 73.31 126.29 129.14 93.12 157.96 230.72 120.17 91.77 293.55 273.34 310.42 203.48 137.65 75.90 119.40 97.87 102.66 96.85 2 426355 Transcript 0 2.12 0.00 0.00 0.00 2.68 1.83 0.00 0.00 0.00 1.15 1.93 0.00 0.00 12.45 2.90 3.96 0.00 3.70 3.19 0.00 0.73 0.00 0.00 3 320805 Transcript 0 228.85 124.97 105.85 84.57 228.47 79.02 123.31 140.60 95.25 137.84 111.79 118.03 84.14 168.03 154.07 172.95 100.24 83.11 66.70 100.66 67.68 107.33 79.32 4 ER1a ExonRegion 0 2.12 0.00 0.00 0.00 2.68 1.83 0.00 0.00 0.00 1.15 1.93 0.00 0.00 12.45 2.90 3.96 0.00 3.70 3.19 0.00 0.73 0.00 0.00 5 ER1b ExonRegion 1 8.58 5.54 18.41 5.73 17.64 18.45 19.33 19.08 16.49 38.32 97.78 6.47 20.34 145.43 103.63 122.75 98.87 42.75 40.76 26.06 43.78 20.95 37.14 6 E1a_E2a KnownJunction 1 31.26 29.93 66.97 20.38 27.25 50.82 74.33 68.06 57.70 99.87 206.79 18.01 42.69 302.67 221.77 228.74 225.43 127.47 59.86 85.39 104.59 58.05 72.90 7 ER2a ExonRegion 0 48.13 36.80 57.24 19.29 51.79 32.98 60.92 79.34 54.26 115.90 232.32 63.22 58.34 335.41 279.75 297.29 251.59 139.72 88.01 72.66 101.85 58.60 82.31 8 E2a_E3a KnownJunction 1 60.38 28.61 52.98 17.38 51.87 16.01 36.92 75.86 62.33 123.46 194.21 38.56 52.11 302.14 269.61 247.88 160.82 125.52 71.06 54.39 71.72 61.05 92.02 9 E2a_E4a NovelJunction 0 0.00 0.00 11.03 7.72 0.00 2.38 0.00 13.10 2.75 8.60 4.90 0.00 0.00 7.00 9.64 7.78 0.00 9.82 4.33 23.01 0.00 0.00 0.00 10 I2 Intron 0 60.77 34.14 26.00 20.23 44.15 15.71 38.70 20.87 11.40 34.43 27.52 60.47 62.19 78.38 53.01 83.28 51.01 29.94 26.18 25.74 13.26 15.20 17.68 11 I2_AR1 ActiveIntronRegion 0 17.35 10.75 25.74 16.19 27.43 13.81 30.07 18.03 9.46 36.10 31.38 33.57 16.46 80.44 53.90 87.84 60.65 36.43 33.79 28.00 14.77 13.17 14.99 12 I2_AR3 ActiveIntronRegion 1 128.74 71.11 32.18 29.93 74.22 20.93 57.58 29.40 16.49 40.01 28.20 106.09 130.54 87.61 60.80 96.19 50.07 28.81 22.09 27.67 14.33 20.47 24.61 13 E3_Aa NovelBoundary 1 54.16 38.74 40.30 30.53 28.86 24.53 54.50 20.78 13.60 52.11 26.01 66.92 78.24 104.54 59.21 117.92 90.79 47.80 21.65 24.80 14.21 8.82 19.46 14 ER3a ExonRegion 0 43.59 31.97 53.52 20.36 41.45 33.23 60.45 79.48 75.62 126.30 301.97 111.25 139.71 413.90 275.37 376.81 280.63 135.78 68.35 61.54 121.48 83.78 83.79 15 E3_Da NovelBoundary 1 44.08 40.19 52.57 16.12 134.30 35.89 118.14 37.42 24.86 73.71 90.81 145.70 120.61 240.33 117.81 147.31 146.14 75.69 34.73 47.17 52.08 35.27 42.94 16 E3a_E4a KnownJunction 0 29.78 9.41 42.64 11.85 34.55 30.27 46.24 56.56 68.26 123.83 269.86 160.25 146.74 308.14 296.31 414.16 291.35 109.27 88.57 64.05 105.08 98.28 94.33 17 E3a_E5a NovelJunction 0 3.63 0.00 0.00 0.00 0.00 0.00 2.25 2.51 0.00 0.00 0.00 0.00 0.00 5.42 15.20 3.25 9.54 0.00 0.00 0.00 0.00 0.00 0.00 18 I3 Intron 0 55.92 33.43 43.76 29.33 62.69 28.59 59.49 40.95 29.69 52.12 113.58 81.84 63.22 194.39 136.14 183.76 126.02 65.37 46.49 47.72 32.65 43.69 52.78 19 I3_AR1 ActiveIntronRegion 1 45.27 33.92 44.69 29.52 65.09 26.11 59.91 35.86 27.27 54.74 111.20 74.44 55.20 203.74 142.28 183.08 131.03 70.67 40.34 46.53 34.83 42.71 54.42 20 I3_SR1 SilentIntronRegion 0 64.51 38.98 50.29 33.68 71.83 33.88 70.05 58.62 39.18 59.22 130.13 102.31 81.91 190.39 132.48 196.27 124.08 68.09 53.58 49.18 24.16 51.38 52.89 21 I3_AR2 ActiveIntronRegion 0 78.83 18.64 25.09 18.61 32.17 26.27 33.38 19.19 16.83 25.45 85.29 63.34 51.01 170.95 123.48 160.09 113.45 38.99 54.72 49.96 45.34 29.80 47.05 22 E4_Aa NovelBoundary 1 175.66 51.64 110.67 44.82 113.75 22.83 32.50 114.60 72.68 110.70 157.78 195.96 73.21 348.40 316.71 336.75 191.77 205.77 114.45 90.63 67.58 90.20 169.62 23 ER4a ExonRegion 0 77.89 41.88 57.89 25.66 106.27 53.13 53.53 69.27 66.09 145.70 440.25 165.05 178.51 452.29 390.59 418.41 423.86 122.32 66.50 102.63 145.09 76.50 102.09 24 E4_Da NovelBoundary 0 48.23 29.21 72.68 44.12 28.18 27.71 70.35 35.24 22.05 59.26 55.28 37.81 19.97 134.44 82.08 152.78 66.85 128.01 56.00 25.44 54.92 26.58 51.39 25 E4a_E5a KnownJunction 0 56.82 31.31 36.13 27.04 69.95 28.00 44.52 67.73 75.14 121.15 277.75 128.89 153.07 393.02 302.00 278.90 333.71 68.03 59.11 85.01 89.89 71.70 87.75 26 I4 Intron 0 18.77 7.89 11.13 9.01 4.45 1.02 13.21 7.14 5.10 5.68 18.22 9.88 9.02 47.82 55.72 46.13 40.26 20.89 23.02 18.87 28.10 6.93 14.65 27 I4_SR1 SilentIntronRegion 0 19.36 8.16 11.51 9.23 4.57 1.05 13.63 7.38 5.26 5.86 18.81 10.22 9.33 49.40 57.57 47.59 41.54 21.57 23.73 19.46 28.99 7.12 15.11 28 E5_Aa NovelBoundary 0 64.46 53.87 78.18 30.33 13.92 28.11 41.69 37.87 29.69 41.77 49.07 7.35 19.48 64.10 96.92 71.86 100.05 74.86 40.94 48.13 27.31 13.29 31.58 29 ER5a ExonRegion 0 151.02 46.10 82.22 49.10 94.27 65.62 97.94 87.10 75.22 146.75 355.50 145.86 107.07 464.06 350.00 529.28 353.07 197.66 71.46 106.72 126.34 96.73 132.02 30 E5_Da NovelBoundary 0 46.60 23.55 109.81 40.95 74.70 25.84 31.71 71.84 39.03 73.60 80.34 43.36 46.26 191.89 202.61 259.68 127.91 174.56 126.12 82.13 39.72 42.31 72.73 31 E5a_E6a KnownJunction 0 99.80 33.02 32.17 27.90 65.70 18.06 42.62 64.03 41.32 100.57 245.06 54.47 46.26 313.15 255.27 261.73 236.75 90.58 25.60 35.60 101.99 44.64 63.85 32 E5a_E8a NovelJunction 0 0.00 0.00 0.00 0.00 4.16 2.90 0.00 1.56 0.00 0.00 12.37 0.00 0.00 9.59 4.45 0.00 4.30 0.00 0.00 0.00 0.00 0.00 0.00 33 I5 Intron 0 64.11 39.84 65.19 31.96 71.89 34.79 67.77 41.34 27.93 59.00 77.66 56.09 54.21 140.27 105.56 155.08 104.70 89.87 56.26 53.99 38.37 29.55 46.04 34 I5_AR1 ActiveIntronRegion 0 62.41 41.10 77.04 35.97 73.94 34.52 69.49 48.50 31.74 69.58 93.19 52.98 52.73 159.25 117.24 179.40 127.32 106.12 69.11 57.01 45.14 31.88 55.56 35 I5_AR2 ActiveIntronRegion 0 35.09 25.81 11.42 2.75 58.05 25.88 75.79 3.57 4.96 10.75 51.00 54.05 33.36 131.74 78.57 75.31 73.47 9.83 33.14 41.32 19.90 15.32 15.30 36 I5_AR3 ActiveIntronRegion 0 96.75 51.21 62.45 37.89 88.20 47.32 75.73 42.44 30.90 56.88 54.68 80.94 80.73 114.55 102.99 143.24 66.74 89.15 36.65 61.52 32.21 34.34 37.42 37 E6_Aa NovelBoundary 0 84.01 95.90 95.27 84.40 50.85 25.04 92.39 70.89 48.64 89.13 86.07 91.68 54.05 189.06 152.91 240.88 82.66 156.20 42.35 94.53 54.43 33.74 24.58 38 ER6a ExonRegion 0 222.76 73.74 99.84 74.65 117.18 58.95 95.13 116.01 69.33 169.50 322.90 77.93 65.40 459.27 367.38 398.82 307.21 152.71 76.21 108.51 137.97 108.77 115.56 39 E6_Da NovelBoundary 0 29.49 23.02 36.07 12.92 6.96 5.22 12.10 20.41 7.81 21.79 15.11 25.21 0.00 9.42 52.17 29.74 35.16 37.18 13.37 12.08 19.21 2.76 14.60 40 E6a_E7a KnownJunction 1 394.07 115.51 128.59 92.63 168.08 95.80 145.30 168.20 91.61 218.20 402.42 84.93 178.88 504.39 460.60 442.62 392.15 245.98 103.81 141.45 172.05 105.93 127.02 41 E7_Aa NovelBoundary 0 16.82 12.37 28.21 12.25 26.57 26.06 23.94 23.99 7.52 17.65 10.11 0.00 0.00 15.30 27.20 19.74 35.62 58.82 22.31 17.45 13.96 12.31 19.63 42 ER7a ExonRegion 0 351.19 98.72 122.68 91.33 174.07 72.60 147.75 147.33 93.55 208.07 382.31 100.84 114.39 530.14 470.11 573.65 394.40 240.64 115.74 144.97 161.75 108.85 137.68 43 E7_Da NovelBoundary 0 13.26 9.80 38.11 21.78 30.73 9.82 3.75 30.81 20.51 35.94 23.11 12.30 13.31 11.42 50.31 62.04 35.72 54.18 39.81 46.21 16.49 8.94 26.97 44 E7a_E8a KnownJunction 0 308.94 100.18 105.11 87.93 207.47 83.59 157.09 163.23 92.30 186.91 400.42 102.33 107.14 537.00 450.71 583.61 389.71 233.59 94.78 127.32 194.48 155.66 145.46 45 I7_AR1 ActiveIntronRegion 0 20.24 7.45 16.30 4.53 11.09 6.43 9.28 13.14 9.39 17.16 17.25 16.44 9.85 19.54 26.27 46.89 21.04 28.85 13.71 15.60 12.97 3.32 13.57 46 ER8a ExonRegion 0 285.06 185.87 145.65 116.18 224.82 88.26 169.57 156.90 117.23 207.43 332.03 152.06 109.28 385.65 394.77 431.43 273.78 199.53 91.58 167.13 125.50 121.60 121.32 47 E8_Da KnownBoundary 0 368.73 266.07 218.47 107.28 648.81 211.75 353.70 143.88 106.10 123.35 82.39 69.47 19.97 229.50 151.31 205.84 132.40 125.81 78.59 118.76 92.67 81.26 113.96 48 ER8b ExonRegion 0 228.85 124.97 105.85 84.57 228.47 79.02 123.31 140.60 95.25 137.84 111.79 118.03 84.14 168.03 154.07 172.95 100.24 83.11 66.70 100.66 67.68 107.33 79.32 49 IG12_AR2 ActiveIntergenicRegion 0 7.34 2.03 5.59 1.63 6.00 2.20 4.67 5.42 5.18 4.52 3.10 5.66 0.77 3.12 7.21 5.93 3.73 5.94 7.41 4.48 8.24 2.92 5.48