Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ATXN2L Gene 0 213.61 211.64 456.31 285.41 187.61 211.43 197.29 353.96 409.91 711.04 1023.72 470.86 615.41 943.70 774.22 752.47 812.08 752.64 615.96 398.58 425.19 358.21 370.45 2 340394 Transcript 1 7.04 10.04 19.17 9.57 16.09 15.76 20.73 38.59 25.16 40.05 68.23 19.88 20.33 89.16 66.01 55.21 73.79 25.74 26.60 12.52 40.59 21.36 40.63 3 325200 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 359153 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 325215 Transcript 0 0.00 0.00 10.64 2.06 3.40 0.00 3.84 2.55 4.22 2.63 22.11 6.30 13.47 43.97 17.80 16.32 20.38 5.14 0.00 0.00 14.21 16.47 4.10 6 382686 Transcript 0 14.30 2.83 10.26 3.70 3.74 2.73 4.15 8.54 7.06 8.73 30.85 10.95 12.99 29.84 51.92 30.33 37.77 4.68 29.74 5.18 29.71 13.47 16.05 7 336783 Transcript 1 195.80 128.88 513.66 281.21 116.36 146.02 115.82 231.35 272.70 482.40 703.56 136.12 220.99 574.11 631.06 528.51 506.52 673.33 544.88 306.56 258.22 209.45 223.80 8 395547 Transcript 1 5.93 3.16 16.14 12.75 3.82 0.00 0.00 8.87 17.04 53.83 42.91 0.00 0.00 7.36 8.90 23.41 7.48 31.96 33.04 9.27 7.66 11.45 36.54 9 IG6 Intergenic 0 9.74 5.99 8.16 8.28 8.86 3.66 6.61 5.75 8.47 12.31 9.86 10.48 7.48 10.77 9.84 8.67 10.94 4.28 7.95 7.94 3.94 4.44 8.49 10 IG6_AR1 ActiveIntergenicRegion 0 15.05 9.68 7.87 8.87 10.36 4.90 10.10 6.03 12.47 18.60 6.92 12.96 10.16 21.12 15.99 13.56 13.30 5.42 8.15 10.87 3.70 8.65 14.28 11 IG6_SR2 SilentIntergenicRegion 0 3.03 1.40 9.34 3.61 1.58 0.49 4.01 4.91 12.41 18.29 54.53 10.13 8.14 22.53 19.57 12.81 41.58 2.73 14.01 12.95 7.94 4.22 4.70 12 ER1a ExonRegion 0 0.00 1.86 0.44 0.00 0.00 3.36 4.28 0.00 1.98 2.02 31.01 2.10 5.43 61.36 15.09 35.57 22.10 4.22 26.19 4.52 9.70 12.17 45.41 13 E1_Ab KnownBoundary 0 0.00 6.31 2.78 0.00 0.00 13.29 21.68 4.19 1.48 11.95 46.22 12.60 6.82 135.21 35.97 122.36 56.47 12.23 94.12 14.83 23.54 32.70 98.85 14 ER1b ExonRegion 0 16.80 20.79 24.83 8.24 8.11 17.63 21.67 21.65 22.34 75.69 167.53 23.73 22.43 227.33 107.51 83.04 143.20 57.02 66.34 46.03 80.84 38.12 50.16 15 E1a_E2a KnownJunction 1 85.57 100.77 80.81 45.62 51.61 46.28 104.36 106.87 111.72 247.37 455.48 12.60 60.06 436.76 239.94 395.28 278.73 336.89 277.00 160.18 187.56 151.19 151.26 16 ER2a ExonRegion 0 123.50 178.19 161.65 109.33 61.76 77.76 128.35 170.46 176.02 339.42 628.87 137.02 185.70 666.33 423.97 503.65 468.55 437.22 398.51 248.94 235.98 190.73 196.76 17 E2a_E3a KnownJunction 0 246.12 318.17 222.08 198.11 129.88 151.16 187.21 240.41 267.27 391.32 856.16 307.45 373.35 812.12 629.34 678.97 688.45 551.25 624.49 387.59 323.28 287.12 283.58 18 ER3a ExonRegion 0 164.83 223.73 247.18 233.72 152.19 131.58 204.49 286.62 347.70 528.06 935.32 352.59 300.57 823.12 499.93 545.05 808.95 691.19 505.41 466.37 367.13 306.50 317.88 19 E3a_E4a KnownJunction 0 298.50 268.70 274.62 288.97 175.38 153.04 274.82 316.15 449.56 676.12 1033.05 472.20 439.42 813.29 613.88 530.63 872.09 708.52 414.79 631.63 377.15 365.99 411.45 20 ER4a ExonRegion 0 231.38 203.78 356.31 321.11 162.70 167.69 210.55 370.63 494.73 770.15 1288.46 506.97 537.66 1160.68 693.60 696.51 1062.20 782.11 709.10 574.76 477.32 408.23 435.93 21 E4a_E5a KnownJunction 0 270.49 270.28 501.11 402.55 243.89 206.70 284.76 478.64 590.50 836.75 1366.50 617.90 663.59 1254.35 879.66 829.10 1146.89 894.61 827.22 749.68 541.60 372.30 425.19 22 ER5a ExonRegion 0 205.47 261.56 432.97 397.62 270.22 253.14 288.83 447.43 558.08 874.50 1398.19 695.18 618.03 1253.62 859.35 913.33 1190.36 994.10 761.62 753.06 550.97 494.86 481.98 23 E5a_E6a KnownJunction 0 292.79 384.01 491.94 441.84 410.27 398.46 409.83 489.85 599.70 1035.72 1481.53 674.92 580.81 1644.13 1063.73 988.03 1336.51 750.60 1108.83 859.37 561.68 725.98 515.76 24 ER6a ExonRegion 0 249.68 296.53 535.25 446.90 261.77 246.05 307.10 514.22 686.51 1020.67 1545.96 1098.54 1079.50 1474.41 1082.28 1245.96 1372.27 1155.73 1241.17 815.86 627.46 614.02 658.40 25 E6a_E7a KnownJunction 0 314.87 354.02 680.31 594.40 322.50 202.44 278.00 545.87 835.06 1249.51 1775.71 1071.50 894.58 1521.05 1284.63 1545.66 1365.87 1431.68 2140.20 925.90 584.85 817.47 858.50 26 ER7a ExonRegion 0 301.26 312.86 495.08 443.03 343.57 313.10 321.91 520.96 711.67 1137.84 1758.79 978.60 831.82 1510.15 910.77 1106.99 1453.97 1150.73 978.70 744.84 680.73 564.77 555.31 27 E7a_E8a KnownJunction 0 340.73 325.67 493.15 390.73 400.76 359.51 344.20 527.47 664.72 1065.94 1445.63 863.38 748.98 1676.33 845.30 1086.55 1242.82 1016.48 848.40 697.59 528.26 436.90 523.79 28 ER8a ExonRegion 0 303.84 263.26 493.75 370.67 226.45 287.34 274.64 426.98 593.91 944.22 1328.07 891.46 728.33 1305.59 891.26 1076.65 1090.69 1199.45 977.00 609.54 568.63 506.73 563.79 29 E8a_E9a KnownJunction 0 270.20 319.88 422.90 278.25 310.78 238.56 324.20 387.86 524.07 870.73 1317.60 572.14 389.91 1349.64 738.86 974.79 1056.66 1022.24 683.69 470.43 605.23 411.98 491.61 30 ER9a ExonRegion 0 229.01 270.71 398.83 228.09 238.14 233.11 268.18 349.70 460.55 787.14 1193.91 458.75 425.10 1312.74 755.83 938.95 967.82 1011.01 621.27 441.45 577.20 423.79 472.92 31 ER9b ExonRegion 0 248.14 194.95 445.30 275.60 176.24 260.50 232.51 375.74 498.67 917.06 1162.95 394.44 390.14 1121.23 806.39 921.56 963.05 1025.28 614.78 484.32 520.25 386.71 453.53 32 E9b_E10a KnownJunction 1 240.93 212.53 402.14 227.34 166.38 202.78 269.66 404.78 490.01 936.60 1320.70 321.85 284.72 1064.22 801.41 728.19 1126.69 856.14 521.33 442.37 593.50 341.19 541.46 33 ER10a ExonRegion 0 250.38 221.73 486.97 279.94 198.97 239.25 264.29 458.02 574.84 1035.16 1325.31 391.45 538.68 1226.39 819.64 1225.53 1047.31 1242.30 766.75 494.71 594.60 510.46 583.04 34 E10a_E11a KnownJunction 0 436.89 342.11 583.51 354.23 278.35 327.31 360.15 565.84 682.14 1236.56 1600.04 491.26 733.07 1355.24 1065.21 1615.05 1297.15 1497.42 1025.25 640.07 653.42 607.62 826.49 35 I10_SR1 SilentIntronRegion 0 72.69 16.34 44.80 27.86 27.04 13.12 18.95 22.14 16.63 25.05 68.32 71.69 52.65 56.59 58.96 91.00 63.46 97.97 50.02 37.49 24.14 32.22 30.97 36 E11_Aa NovelBoundary 0 132.69 60.58 129.21 74.65 41.60 44.69 100.43 89.79 67.85 143.12 247.75 174.66 94.15 159.16 161.82 156.20 182.80 333.41 182.69 128.28 80.68 60.44 54.03 37 ER11a ExonRegion 0 287.63 277.75 467.34 296.69 278.70 316.90 312.64 428.55 514.87 946.24 1376.05 523.24 609.97 1280.93 766.51 1093.19 1134.24 1020.68 794.67 441.16 601.04 484.15 552.37 38 E11a_E12a KnownJunction 0 236.12 346.39 580.97 371.61 405.60 360.02 363.50 535.77 527.19 1023.82 1422.57 474.00 615.54 1572.67 722.91 947.02 1244.22 915.66 950.24 486.41 625.87 480.50 533.26 39 E11a_E13a NovelJunction 0 10.89 25.52 6.42 1.66 7.13 16.24 16.12 30.03 26.16 31.89 53.22 25.36 19.64 52.21 46.85 59.81 49.28 29.27 0.00 11.31 12.60 12.31 0.00 40 ER12a ExonRegion 0 275.91 279.65 508.99 315.55 352.53 341.65 307.78 478.33 524.48 1001.15 1615.90 692.11 776.46 1411.13 700.05 918.22 1274.88 833.21 791.61 441.01 682.60 471.95 418.51 41 E12a_E13a KnownJunction 0 397.85 293.43 568.19 369.02 310.87 313.23 347.91 509.98 565.97 1006.28 1146.92 568.09 702.55 1211.02 755.55 873.96 1098.18 844.94 823.65 390.60 622.10 505.67 384.65 42 I12 Intron 0 48.82 24.10 37.48 39.54 53.23 13.58 45.67 41.43 22.98 36.16 50.72 25.49 25.80 25.70 26.87 26.39 51.69 19.45 23.59 22.06 5.60 25.13 21.75 43 I12_AR1 ActiveIntronRegion 0 53.83 26.10 41.38 43.43 58.55 14.61 50.11 45.14 25.63 39.94 56.08 28.71 27.94 27.75 30.19 29.54 56.78 21.65 25.69 23.79 5.93 27.95 24.26 44 E13_Aa NovelBoundary 0 72.68 11.77 90.33 51.84 41.17 24.53 103.65 51.79 45.66 80.61 48.85 13.05 68.50 42.56 50.56 38.79 50.77 24.66 32.85 28.19 20.39 24.68 15.96 45 ER13a ExonRegion 0 377.46 309.79 610.01 432.32 390.09 381.38 369.89 605.01 640.19 1159.73 1559.52 1015.66 1078.58 1593.86 865.59 1371.70 1334.91 1165.12 999.40 491.37 666.79 575.58 705.70 46 E13a_E14a KnownJunction 0 574.84 416.04 805.94 596.53 550.34 433.67 412.61 738.88 843.08 1368.48 2069.73 1223.35 1073.14 1802.76 1066.08 1767.91 1604.39 1668.62 1577.83 597.05 842.77 777.97 894.09 47 ER14a ExonRegion 0 382.02 429.96 645.33 441.21 389.54 419.31 368.90 602.33 678.49 1135.66 1578.65 809.57 846.61 1513.07 994.35 1259.95 1276.31 1060.31 1016.04 531.51 646.86 627.09 648.24 48 E14a_E15a KnownJunction 0 892.45 727.17 759.64 611.08 491.34 489.77 506.06 654.88 718.19 1329.00 1766.08 1029.94 1004.15 1757.68 1115.03 1504.73 1267.88 1014.61 1228.27 671.39 618.82 866.27 817.18 49 ER15a ExonRegion 0 623.53 607.46 776.11 651.30 532.55 504.98 509.76 764.17 807.24 1394.39 2018.58 935.91 1193.88 1609.90 987.13 1337.33 1443.53 1341.70 1162.25 623.46 704.53 746.47 657.39 50 E15a_E16a KnownJunction 0 825.55 686.65 928.03 775.79 770.71 816.92 737.34 942.98 933.90 1572.69 2138.70 1163.18 1535.45 1534.71 1294.52 1518.23 1545.02 1696.98 1213.31 624.47 773.39 830.75 732.33 51 ER16a ExonRegion 0 571.65 532.52 870.39 678.36 427.79 500.51 445.86 781.43 818.60 1369.73 1818.75 1177.44 1582.74 1602.45 1300.29 1470.49 1380.02 1581.28 1131.09 709.16 697.77 818.57 727.33 52 E16a_E17a KnownJunction 0 446.30 703.89 951.80 711.36 314.69 460.70 459.12 815.73 803.23 1405.74 1620.04 850.48 1271.18 1884.93 1489.47 1214.04 1318.28 1424.92 1459.15 769.63 674.98 1076.12 650.21 53 ER17a ExonRegion 0 243.05 555.58 863.33 517.63 343.41 426.35 423.29 654.09 694.32 1273.35 1780.12 1052.36 1423.01 1392.92 1201.52 982.39 1422.78 1212.66 909.75 660.88 771.78 645.52 433.09 54 E17a_E18a KnownJunction 0 349.17 515.76 867.03 543.92 485.91 445.54 439.68 638.54 718.16 1179.45 1506.75 1008.18 1401.69 1386.20 1282.65 1147.56 1224.40 1315.61 880.78 690.31 721.93 601.13 446.36 55 ER18a ExonRegion 0 273.85 291.60 553.11 271.82 174.88 234.91 229.47 398.78 464.48 899.44 1361.36 825.29 1644.55 1231.07 1439.67 913.53 1084.66 776.44 776.74 496.87 593.24 517.31 480.44 56 E18a_E19a KnownJunction 1 182.11 218.78 860.35 388.43 84.55 150.88 148.30 643.92 730.58 1315.94 1520.81 404.83 787.61 630.06 871.26 450.91 1083.22 612.93 324.24 553.59 571.38 213.03 236.80 57 ER19a ExonRegion 0 427.96 317.07 797.54 401.54 245.18 320.22 247.33 597.27 668.88 1183.25 1603.47 811.01 1860.43 1355.48 1382.02 1110.48 1159.07 1310.44 805.33 589.11 654.45 404.46 583.26 58 E19a_E20a KnownJunction 1 1036.04 636.60 1076.13 522.24 356.88 570.86 452.18 782.46 846.98 1377.78 2125.06 1095.06 3028.05 2179.89 2236.61 2193.19 1701.07 1843.60 1618.59 1037.31 841.96 768.30 1157.01 59 ER20a ExonRegion 0 157.09 140.62 680.07 245.86 107.47 181.59 134.11 369.85 415.62 731.80 1142.39 559.81 1243.90 1013.22 1223.54 843.82 878.50 841.06 586.73 404.48 501.02 319.72 398.88 60 E20a_E21a KnownJunction 1 72.01 70.58 712.48 293.47 59.42 106.64 52.16 372.01 484.28 708.30 759.14 417.59 967.63 725.83 828.24 670.42 742.03 639.71 312.01 356.98 365.29 152.90 366.63 61 ER21a ExonRegion 0 107.71 105.10 607.66 261.21 102.53 125.64 91.03 414.80 415.96 746.44 966.95 387.86 620.31 767.04 931.65 603.71 737.44 605.84 427.78 359.28 461.53 268.15 266.17 62 E21a_E22a KnownJunction 0 480.38 225.62 660.56 340.15 209.93 311.92 246.87 514.95 548.61 947.47 1629.68 387.28 577.56 911.48 897.71 981.02 1155.59 980.17 779.22 438.79 605.29 412.59 535.99 63 ER22a ExonRegion 0 103.36 108.30 344.66 153.70 95.38 145.82 99.22 232.99 253.14 469.35 685.52 280.57 426.84 706.51 722.87 463.46 506.79 451.78 350.52 207.17 306.83 206.01 236.38 64 E22_Da KnownBoundary 0 145.21 55.91 328.40 137.18 90.32 53.83 65.14 169.84 175.14 330.89 337.51 68.57 129.70 472.54 445.76 481.07 290.14 531.52 282.55 168.74 168.10 100.73 207.01 65 E22a_E22b NovelJunction 0 0.00 3.35 2.93 3.20 8.06 0.00 0.00 15.53 10.82 19.53 41.75 0.00 25.49 10.48 19.53 10.51 13.09 1.62 18.17 5.62 16.25 8.57 11.10 66 E22a_E22c KnownJunction 0 14.08 18.22 37.91 19.15 32.17 28.17 37.19 77.18 48.35 78.09 105.45 37.66 35.22 116.96 116.94 74.85 125.48 47.26 27.01 20.52 71.48 30.56 35.85 67 E22a_E22d KnownJunction 0 14.30 2.83 10.26 3.70 3.74 2.73 4.15 8.54 7.06 8.73 30.85 10.95 12.99 29.84 51.92 30.33 37.77 4.68 29.74 5.18 29.71 13.47 16.05 68 ER22b ExonRegion 0 99.71 63.15 298.85 138.56 58.52 69.31 60.44 127.71 182.36 328.04 435.87 105.75 141.31 513.64 463.07 475.26 316.52 530.03 338.42 173.72 191.52 142.30 217.31 69 E22_Db KnownBoundary 1 198.26 120.24 384.64 210.63 106.88 46.62 67.79 186.72 227.31 418.70 547.35 109.69 181.64 560.01 543.79 594.12 405.14 605.51 425.14 288.39 209.36 188.23 285.11 70 E22b_E22b KnownJunction 0 0.00 0.00 1.74 0.00 0.00 0.00 0.00 3.78 0.00 10.07 19.37 0.00 0.00 0.00 0.00 0.00 9.54 4.85 0.00 3.26 0.00 3.12 11.87 71 E22b_E22c NovelJunction 0 0.00 3.22 18.75 8.39 4.16 19.02 9.98 17.33 11.34 45.56 17.16 5.70 0.00 29.67 24.11 22.47 4.39 1.91 12.80 8.31 10.81 3.12 10.67 72 E22b_E22d KnownJunction 0 0.00 0.00 10.64 2.06 3.40 0.00 3.84 2.55 4.22 2.63 22.11 6.30 13.47 43.97 17.80 16.32 20.38 5.14 0.00 0.00 14.21 16.47 4.10 73 ER22c ExonRegion 1 210.35 110.90 386.32 182.15 96.49 120.87 100.82 173.08 221.03 403.44 632.10 108.27 141.51 537.61 514.06 382.75 426.74 484.71 435.40 239.42 230.17 179.46 178.25 74 E22_Ab KnownBoundary 1 486.83 162.34 348.01 171.31 155.77 193.52 142.51 152.63 223.58 373.76 532.56 103.68 153.89 422.63 481.00 373.41 360.07 407.45 336.29 246.21 226.66 143.78 158.86 75 ER22d ExonRegion 0 149.08 140.46 458.91 221.29 111.32 144.57 110.53 192.97 247.59 432.25 649.78 145.71 295.84 625.58 750.97 529.75 469.46 580.63 500.27 292.59 244.17 217.17 236.72 76 E22_Dc KnownBoundary 1 32.60 81.30 306.35 163.22 83.87 72.00 40.59 113.08 151.97 283.18 428.00 41.71 79.70 251.69 272.70 211.06 389.62 266.71 179.30 256.12 152.53 80.15 95.27 77 E22c_E22c NovelJunction 0 0.00 0.00 20.99 4.13 0.00 0.00 0.00 24.77 28.07 59.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35.24 0.00 0.00 0.00 0.00 0.00 78 E22_Dd KnownBoundary 1 69.79 125.18 270.81 173.64 83.36 140.26 86.29 116.32 177.40 269.16 438.43 57.32 109.08 236.27 214.72 241.99 314.91 375.69 234.08 192.01 185.70 64.17 87.33 79 E22d_E22c KnownJunction 0 5.93 3.16 16.14 12.75 3.82 0.00 0.00 8.87 17.04 53.83 42.91 0.00 0.00 7.36 8.90 23.41 7.48 31.96 33.04 9.27 7.66 11.45 36.54 80 ER22e ExonRegion 1 71.54 133.81 504.36 267.81 125.22 152.39 104.46 207.59 295.93 486.63 733.15 88.32 232.63 538.07 517.00 386.08 538.71 565.04 351.03 350.21 284.50 132.51 183.54 81 ER22f ExonRegion 0 181.24 146.87 641.01 380.26 136.24 171.18 130.82 289.62 324.37 561.36 775.03 163.97 300.46 610.62 748.06 674.27 586.30 861.94 654.36 373.71 286.28 239.43 269.34 82 E22_Ac KnownBoundary 0 596.62 215.09 627.27 445.66 260.53 294.83 220.11 295.32 314.72 511.10 960.61 285.84 364.10 605.63 573.71 881.31 679.66 915.37 1074.95 438.98 315.50 337.21 405.22 83 E22_Ad KnownBoundary 0 334.28 179.51 406.61 198.38 194.99 197.95 147.24 208.49 196.50 373.54 591.47 123.19 215.73 521.46 660.73 529.69 384.38 356.79 397.56 254.77 237.84 142.00 278.71 84 ER22g ExonRegion 1 418.52 211.93 634.26 396.36 255.94 251.95 184.43 350.50 347.77 620.58 963.68 185.41 299.75 717.72 727.84 848.61 675.25 880.25 786.37 384.83 368.40 267.96 404.49 85 ER22h ExonRegion 0 165.30 173.84 489.27 281.69 157.35 157.44 129.06 295.94 299.16 529.83 763.87 230.88 332.39 789.04 901.64 618.10 603.46 524.18 489.38 308.01 347.66 252.12 244.48 86 E22_Ae KnownBoundary 0 29.63 66.63 395.17 241.99 86.50 96.08 82.98 209.27 270.66 439.19 586.31 211.42 258.26 572.49 678.41 364.69 366.25 256.06 249.04 251.39 288.87 162.39 148.79 87 ER22i ExonRegion 1 58.92 97.16 359.42 242.65 145.33 118.99 102.70 270.15 260.12 448.00 613.78 117.50 142.08 625.42 669.86 397.62 473.85 222.78 333.95 231.30 250.19 251.84 155.62 88 E22_De KnownBoundary 1 104.17 100.64 281.48 218.19 202.04 112.49 120.61 210.55 201.16 404.94 489.76 157.70 133.60 514.57 433.28 348.54 279.94 112.79 222.12 180.37 152.71 368.81 105.17 89 ER22j ExonRegion 0 71.36 79.41 143.68 130.88 104.17 49.69 64.11 126.12 113.90 187.00 224.13 77.15 125.40 241.07 234.52 145.56 176.05 55.86 125.33 81.98 64.63 137.39 46.14 90 ER22k ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.81 0.97 10.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 91 ER22l ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00