Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HIRIP3 Gene 0 57.07 58.37 89.23 54.23 75.28 60.74 111.28 60.84 46.35 119.25 73.90 40.83 53.08 133.74 126.10 93.11 113.86 196.24 71.23 140.10 18.60 17.60 20.15 2 352552 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 279392 Transcript 0 39.86 49.74 67.01 43.54 88.29 72.36 106.42 49.74 35.27 110.99 64.58 29.72 40.36 110.77 92.79 70.25 105.65 154.01 50.75 121.07 14.45 15.24 16.63 4 ER1a ExonRegion 0 22.84 28.70 21.09 16.41 24.77 32.47 53.97 13.13 10.25 29.20 30.52 7.14 4.64 48.27 50.83 51.84 41.08 96.47 39.71 52.16 10.05 9.41 9.42 5 E1a_E2a KnownJunction 0 26.97 12.56 111.88 87.80 7.30 9.94 41.91 72.66 47.31 123.32 45.49 25.36 25.49 45.62 67.50 62.29 36.65 475.26 36.99 72.10 11.24 5.94 16.22 6 ER2a ExonRegion 1 23.82 28.25 57.94 35.55 16.50 25.69 33.79 42.17 36.37 110.50 67.76 10.30 8.29 79.96 83.49 59.91 150.40 171.64 31.77 97.13 25.41 14.19 16.04 7 E2_Da NovelBoundary 0 9.33 9.60 6.33 4.56 0.00 8.52 2.25 12.03 9.58 5.61 20.11 0.00 6.66 4.94 19.90 12.73 18.98 25.49 28.33 24.61 5.44 0.00 8.37 8 E2a_E3a KnownJunction 1 21.41 45.39 109.16 73.62 28.27 41.62 38.51 87.49 83.59 179.03 121.29 25.51 5.84 144.33 132.52 73.66 260.87 350.74 61.93 246.21 20.32 27.68 10.93 9 E3_Aa NovelBoundary 0 13.63 6.71 13.84 8.76 12.31 24.64 19.34 4.31 10.65 8.68 7.53 0.00 0.00 17.19 8.90 0.00 0.00 10.16 22.78 11.51 2.84 0.00 0.00 10 ER3a ExonRegion 1 27.51 52.87 117.12 78.87 63.00 69.65 87.61 93.70 65.61 171.19 87.96 18.31 40.65 214.30 169.90 218.06 144.75 406.13 181.96 215.40 25.52 25.06 41.47 11 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E3b_E4a KnownJunction 0 46.01 58.34 60.67 36.16 148.81 118.57 158.32 49.82 30.41 147.50 82.86 25.96 44.96 133.09 69.84 75.62 152.50 146.99 52.05 138.89 16.80 20.21 16.13 13 E3b_E5a NovelJunction 1 11.04 6.38 39.32 26.07 63.75 57.81 72.25 28.18 22.95 48.46 38.69 11.85 12.66 84.00 43.88 16.24 87.70 81.87 27.95 32.85 15.44 0.00 8.62 14 ER3b ExonRegion 1 25.40 48.81 62.49 39.52 96.33 115.53 111.21 48.40 25.94 137.63 86.98 17.32 42.21 116.94 60.93 80.25 125.43 149.67 50.97 125.53 17.63 16.67 11.75 15 ER4a ExonRegion 0 99.90 88.85 130.57 77.30 132.51 86.85 179.98 78.22 60.22 153.83 93.29 77.23 114.64 182.21 156.76 115.15 153.51 265.72 92.51 185.24 22.98 21.05 28.13 16 E4a_E5a KnownJunction 0 26.60 50.65 80.90 61.06 60.70 37.82 77.95 66.79 54.66 112.74 59.75 25.21 0.00 113.49 172.08 79.72 87.98 206.73 54.50 153.91 14.83 17.57 27.15 17 ER5a ExonRegion 1 43.77 74.58 111.81 67.35 74.70 90.55 143.76 86.65 63.77 155.48 88.80 39.76 18.09 160.61 165.41 111.53 128.75 220.63 61.37 183.48 19.10 20.91 30.15 18 E5a_E6a KnownJunction 0 69.94 63.02 112.83 76.68 66.72 91.08 92.04 97.59 50.23 123.70 65.75 32.86 6.49 215.14 268.87 114.41 134.74 278.73 67.58 198.53 30.21 34.05 28.94 19 ER6a ExonRegion 1 54.32 36.58 84.41 50.91 34.89 35.40 70.10 73.26 47.37 143.92 93.60 11.94 10.19 151.11 190.13 89.22 116.70 171.65 66.80 144.53 18.63 16.29 15.37 20 E6a_E7a KnownJunction 0 64.60 42.69 82.32 36.99 35.99 16.58 65.89 75.99 42.79 126.87 75.23 18.91 14.77 147.80 153.16 52.64 117.06 127.01 48.57 148.48 17.42 14.08 3.84 21 ER7a ExonRegion 1 25.38 34.51 75.60 43.93 37.71 37.75 50.00 66.35 52.25 125.04 73.15 22.54 13.23 110.61 122.94 62.84 89.80 105.26 48.02 123.02 15.42 18.39 7.17 22 ER7b ExonRegion 0 1.41 2.03 0.41 3.63 3.12 3.06 4.63 5.47 5.15 3.25 0.00 2.89 0.00 8.12 4.35 0.50 8.80 0.92 3.72 1.77 0.00 0.69 0.00 23 IG49 Intergenic 0 12.16 13.29 20.61 9.05 15.37 7.08 15.21 16.32 10.39 24.37 9.95 4.24 2.68 10.77 14.65 7.65 7.52 17.28 14.51 22.76 2.40 3.09 2.62 24 IG49_SR2 SilentIntergenicRegion 0 15.81 7.10 20.86 8.16 18.20 8.44 17.13 15.73 8.92 21.81 10.74 8.98 1.45 7.98 17.09 11.45 11.61 20.19 18.72 21.70 2.78 9.00 4.13 25 IG49_AR1 ActiveIntergenicRegion 0 12.24 16.29 24.06 10.78 17.36 7.45 16.93 19.23 12.47 28.89 11.47 3.92 3.40 13.20 16.33 8.12 7.90 19.58 16.06 26.85 2.73 2.33 2.73