Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ALDOA Gene 0 484.86 729.19 1456.70 337.09 379.45 446.08 308.26 730.70 872.78 1260.54 3480.30 756.01 404.51 2187.34 2658.60 1775.53 1821.10 933.40 1025.93 812.07 1618.08 1402.60 1360.18 2 395248 Transcript 0 0.67 0.21 1.16 0.45 3.06 1.67 1.01 1.75 1.35 2.61 12.26 1.07 0.79 4.85 7.30 3.32 2.55 1.30 1.33 1.34 1.65 2.14 2.27 3 338110 Transcript 1 322.34 111.83 104.98 28.41 144.87 84.28 174.08 67.02 77.50 224.48 2126.57 22.54 18.40 650.50 918.39 1281.49 1095.46 125.16 327.89 124.88 127.94 229.30 387.89 4 436540 Transcript 1 13.03 18.41 9.34 4.26 16.24 13.69 17.67 4.46 11.53 20.06 146.73 7.44 2.41 48.23 44.13 68.30 53.13 11.11 38.81 17.37 8.72 16.81 25.44 5 412304 Transcript 0 0.88 2.42 2.92 0.06 1.69 2.61 1.27 3.28 3.41 5.70 10.76 8.74 0.74 2.30 1.84 2.45 6.96 4.18 1.62 5.21 4.98 0.89 1.99 6 395240 Transcript 0 250.23 295.98 781.12 67.34 161.69 372.37 164.09 334.88 382.80 550.92 1141.43 178.19 126.12 481.16 669.56 481.64 908.30 373.86 396.53 396.69 1730.82 409.76 558.59 7 IG1_AR1 ActiveIntergenicRegion 0 0.39 5.13 19.77 3.70 2.80 12.31 1.35 9.47 8.17 33.57 0.00 0.79 0.00 0.48 0.00 0.00 0.83 21.52 29.79 47.72 0.00 0.00 0.53 8 ER1a ExonRegion 0 0.31 0.08 0.00 0.00 5.63 4.13 3.14 0.25 0.08 0.19 0.00 1.53 0.00 0.00 2.36 0.00 0.21 0.96 4.05 1.55 0.69 0.00 3.18 9 E1_Ab KnownBoundary 0 0.00 0.00 3.19 0.00 10.27 4.60 5.87 0.00 0.00 1.10 0.00 6.30 0.00 0.00 4.45 0.00 3.83 1.70 3.58 8.76 2.78 0.00 0.00 10 ER1b ExonRegion 0 5.72 4.07 0.00 0.00 3.87 20.41 6.08 3.31 3.63 3.49 0.00 2.30 0.00 2.25 8.70 2.15 3.30 7.94 35.72 10.14 4.50 0.00 8.87 11 E1a_E2a KnownJunction 0 3.11 0.00 0.00 0.00 3.23 20.05 4.42 9.41 5.18 4.65 0.00 0.00 0.00 5.47 4.45 4.27 0.00 21.89 8.75 13.74 6.30 0.00 3.33 12 ER2a ExonRegion 0 1.23 0.34 0.00 0.00 5.43 18.24 3.16 5.67 3.02 4.81 2.58 0.00 0.00 3.74 1.29 4.54 0.18 14.63 6.46 8.92 2.57 0.87 0.82 13 E2a_E3a KnownJunction 0 0.00 0.00 1.60 0.00 11.97 22.49 4.37 11.09 0.00 8.33 4.90 0.00 0.00 2.47 5.07 3.76 4.68 19.32 0.00 2.88 0.00 5.08 0.00 14 ER3a ExonRegion 0 6.70 2.85 5.02 0.74 5.02 11.49 1.37 9.39 5.00 9.40 5.89 2.53 1.37 2.48 2.10 4.48 3.48 19.25 21.37 19.71 7.18 2.39 7.93 15 E3a_E4a KnownJunction 0 0.00 0.00 4.17 0.00 0.00 8.23 0.00 8.46 3.21 13.70 2.68 0.00 0.00 2.47 0.00 0.00 0.00 21.80 18.82 13.87 5.44 3.12 11.61 16 ER4a ExonRegion 0 1.40 1.45 10.09 2.84 5.21 16.20 7.68 17.88 9.58 18.23 9.76 2.39 2.22 4.47 4.58 7.74 7.83 38.54 14.58 18.39 6.43 5.13 7.12 17 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 E4a_E6a KnownJunction 0 3.26 5.72 11.59 6.19 0.00 13.17 8.48 17.21 8.01 21.25 7.90 0.00 6.82 19.01 0.00 0.00 13.09 36.44 20.99 21.48 0.00 0.00 19.55 19 ER5a ExonRegion 0 0.00 0.00 0.78 1.00 2.42 0.02 0.60 0.00 0.86 1.50 0.00 3.14 4.98 0.00 1.85 2.68 0.00 2.49 0.00 1.88 0.00 0.00 2.65 20 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER6a ExonRegion 0 5.07 6.58 10.35 2.66 7.13 15.22 6.50 20.77 19.52 16.44 10.71 1.06 2.13 10.55 7.44 7.03 12.97 34.06 16.72 21.90 8.85 5.83 6.66 22 E6_Da KnownBoundary 0 7.48 17.10 17.89 3.93 37.44 61.50 15.99 37.83 21.24 26.35 16.95 0.00 0.00 9.83 36.10 23.75 15.99 55.84 35.01 38.73 15.20 5.88 20.91 23 E6a_E7b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER6b ExonRegion 1 181.84 59.80 64.99 18.21 88.16 82.02 102.12 57.60 60.33 134.06 1165.51 18.42 15.58 455.40 545.14 746.47 704.41 115.29 246.69 104.53 76.61 159.83 252.67 25 E6b_E7b KnownJunction 1 781.92 269.95 238.34 60.83 346.43 157.64 411.64 126.26 164.15 518.14 5206.32 49.22 32.79 1477.08 2210.03 3097.99 2568.86 223.77 715.97 248.64 307.22 528.08 891.45 26 ER7a ExonRegion 0 13.03 18.41 9.34 4.26 16.24 13.69 17.67 4.46 11.53 20.06 146.73 7.44 2.41 48.23 44.13 68.30 53.13 11.11 38.81 17.37 8.72 16.81 25.44 27 E7_Ab KnownBoundary 0 42.90 75.78 28.41 23.54 60.27 75.64 74.37 13.31 33.68 54.13 149.72 41.11 6.82 66.93 70.34 57.85 103.60 11.81 57.32 67.69 19.65 9.00 40.46 28 ER7b ExonRegion 1 567.51 759.63 322.42 198.44 719.94 484.51 566.23 269.34 352.77 745.54 3685.82 256.03 99.24 1351.27 1376.05 1621.72 1769.32 441.04 887.62 724.93 244.23 326.26 657.88 29 E7a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.52 1.68 1.26 7.37 0.00 0.00 4.83 8.90 0.00 4.77 1.95 0.00 0.00 0.00 0.00 0.00 30 E7a_E11a KnownJunction 1 419.48 1131.84 424.64 279.55 829.54 667.51 457.22 451.73 606.01 1026.21 3899.04 487.81 118.99 1066.64 1345.33 784.32 2228.52 585.28 1040.88 1001.71 278.80 262.14 492.55 31 ER8a ExonRegion 0 1.75 1.48 1.04 0.11 3.38 0.33 0.47 1.62 2.39 2.78 13.88 17.48 1.48 4.60 3.69 1.65 9.80 6.03 3.23 7.15 7.31 1.79 3.97 32 E8a_E11a KnownJunction 0 0.00 3.35 4.79 0.00 0.00 4.88 2.08 4.93 4.43 8.62 7.63 0.00 0.00 0.00 0.00 3.25 4.11 2.32 0.00 3.26 2.66 0.00 0.00 33 ER9a ExonRegion 0 269.30 271.36 394.69 46.52 121.43 434.58 196.54 167.62 191.89 297.90 682.73 58.54 30.17 473.53 568.12 463.67 553.29 331.49 313.51 199.71 921.85 493.52 607.73 34 E9a_E11a KnownJunction 1 231.15 320.60 1167.55 88.17 201.95 310.16 131.65 502.13 573.72 803.95 1600.14 297.85 222.06 488.79 771.00 499.61 1263.30 416.23 479.54 593.66 2539.79 326.01 509.45 35 ER10a ExonRegion 0 5.02 1.58 8.54 1.33 7.75 9.22 2.09 4.75 4.68 10.49 46.65 3.88 1.34 19.94 23.29 11.91 11.72 2.71 2.75 7.29 6.38 8.63 12.32 36 E10a_E11a KnownJunction 0 0.00 0.00 0.00 1.30 8.66 0.00 2.25 4.48 3.47 7.41 44.06 0.00 0.00 14.07 22.00 11.96 3.74 2.28 3.86 0.00 6.12 8.45 0.00 37 ER11a ExonRegion 0 266.43 608.50 2316.67 462.81 366.76 409.36 230.71 1219.76 1391.17 2213.33 8041.66 1157.20 501.27 3696.83 4243.07 3606.95 3969.12 1716.93 2239.84 1561.30 3175.89 2800.45 2872.39 38 E11a_E12a KnownJunction 0 396.51 562.27 3388.91 650.90 515.54 584.04 246.83 1455.46 1814.10 2761.01 7420.35 1359.74 615.87 3919.97 4459.74 4070.39 3859.46 2043.65 2319.03 2092.52 3261.91 2354.43 2576.94 39 ER12a ExonRegion 0 942.75 1796.57 3158.47 609.56 979.11 1114.29 841.91 1517.09 1974.03 2841.53 7369.34 1530.22 686.36 4768.09 5117.62 3290.05 4031.14 1684.60 1992.17 1895.92 3702.56 2921.48 2602.27 40 E12a_E13a KnownJunction 0 1968.05 3400.71 3462.68 812.42 836.50 1099.42 810.16 1851.49 2324.92 3141.13 7654.20 1714.46 597.53 5875.89 6535.03 3589.14 4343.15 1958.59 2017.28 2250.52 3577.53 3322.59 2914.98 41 ER13a ExonRegion 0 1805.62 3044.45 3523.41 866.40 1016.05 1221.11 779.09 1772.80 2211.48 3016.23 8483.39 1947.39 818.45 5734.82 6691.13 4536.98 4481.48 2387.46 2427.48 2090.71 4099.62 3898.76 3515.91 42 E13a_E14a KnownJunction 0 1831.29 3406.63 4042.02 1058.07 1274.02 1529.29 886.96 1787.17 2198.13 2978.18 7870.78 2122.14 1056.10 5570.69 6895.99 4417.56 4204.11 2474.10 2381.06 2158.93 4223.22 3649.76 3521.23 43 ER14a ExonRegion 0 1445.16 2276.09 5121.32 1300.30 1240.47 1243.10 883.31 2309.53 2783.27 3843.74 10718.46 2338.13 1248.16 6711.69 8009.87 5720.53 5265.07 3266.59 3210.51 2631.02 4836.53 4513.63 4143.02 44 E14a_E15a KnownJunction 0 1888.33 2094.82 6653.61 1803.80 1490.92 1575.23 1143.33 2970.52 3390.82 4581.87 12325.49 2061.07 1068.60 6621.26 7362.65 6806.25 5822.06 3677.83 3923.97 3202.57 5145.56 5374.46 5448.30 45 ER15a ExonRegion 0 1702.71 2156.25 5681.46 1400.40 1125.02 1283.51 886.72 2477.72 2920.93 4172.55 10526.77 2740.76 1405.06 6382.48 8491.38 5875.96 5004.90 3374.63 3284.26 2661.52 4651.48 4770.99 4358.50 46 E15a_E16a KnownJunction 0 1902.93 3383.21 5633.39 1364.79 1107.39 1330.94 853.93 2579.61 2921.15 4340.25 10646.38 2370.17 1369.72 5381.69 8189.77 5821.55 5178.30 3231.46 3237.93 2553.49 4671.48 4262.22 3885.47 47 ER16a ExonRegion 0 1394.42 2825.02 4237.28 980.50 1131.05 1376.54 946.49 2156.18 2499.90 3586.96 9639.38 2164.44 1206.17 6171.40 7638.12 4684.72 4831.68 2567.59 2829.39 2153.14 4515.17 3711.20 3646.09 48 E16a_E17a KnownJunction 0 1211.99 2022.67 3280.31 837.82 991.51 1189.54 747.50 1721.41 1976.57 2823.14 6842.68 1999.25 1147.98 5094.20 6014.36 3797.55 3314.72 2753.21 1608.89 1854.81 3174.92 2389.21 3040.46 49 ER17a ExonRegion 0 836.44 1277.70 3270.75 757.53 706.46 934.38 600.46 1826.09 2119.30 3019.55 8004.99 1972.63 1168.10 5720.29 7372.21 4458.92 4358.44 2464.73 2538.30 1833.19 4010.50 3295.40 3582.25 50 E17a_E18a KnownJunction 0 720.79 779.60 2677.61 663.09 738.96 779.66 528.67 1699.60 1923.01 2813.17 5825.16 1033.69 466.37 3220.45 4906.74 2093.30 3246.37 1302.67 1207.47 1670.22 3276.61 2382.17 1754.30 51 ER18a ExonRegion 0 833.02 704.73 1819.04 439.18 431.11 454.39 312.85 984.39 1171.29 1689.97 3916.83 1173.68 739.97 2865.71 3738.40 2024.27 2214.53 972.71 1164.02 932.16 2049.43 1890.92 1631.43 52 ER18b ExonRegion 0 12.09 20.63 14.53 7.79 10.32 5.76 13.43 12.59 13.23 16.55 48.60 38.97 46.90 89.56 49.74 21.23 27.35 15.84 14.11 18.84 30.54 6.85 20.98 53 IG2 Intergenic 0 2.23 5.49 7.52 2.65 6.61 3.13 2.75 11.34 15.90 5.68 2.64 4.01 1.01 2.35 2.09 3.88 3.94 3.37 2.90 4.17 1.81 2.01 9.76 54 IG2_SR1 SilentIntergenicRegion 0 1.21 5.32 8.97 1.33 2.15 1.69 1.22 8.38 15.66 4.84 4.82 2.00 0.00 5.34 3.22 2.94 4.86 4.10 5.11 6.99 2.47 1.12 7.55 55 IG2_AR1 ActiveIntergenicRegion 0 2.12 4.69 17.25 2.73 6.38 2.68 2.04 21.01 30.50 12.00 5.06 0.00 0.00 4.62 1.56 5.94 3.30 9.67 3.92 12.27 2.03 0.32 14.46 56 IG2_SR2 SilentIntergenicRegion 0 2.37 3.90 16.96 4.74 8.13 2.57 3.71 21.02 31.37 14.27 5.33 0.00 0.00 1.95 2.79 7.13 0.79 12.34 6.37 14.13 2.20 0.67 11.28 57 IG2_AR2 ActiveIntergenicRegion 0 3.42 10.53 11.42 5.68 14.87 5.38 6.43 21.26 27.71 11.62 5.73 1.55 0.00 2.39 4.66 7.54 7.16 5.15 5.45 6.89 3.26 2.96 12.42 58 IG2_SR3 SilentIntergenicRegion 0 3.29 8.16 13.47 4.73 11.08 5.93 2.23 19.67 30.74 8.41 2.50 7.12 2.00 4.02 1.33 6.54 6.84 5.94 4.54 6.06 3.42 4.58 17.49