Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 IL21R Gene 0 53.18 1.61 6.58 6.38 25.55 5.27 9.88 22.89 11.87 14.03 530.78 118.47 165.93 380.80 390.31 518.85 429.04 5.81 3.32 5.54 0.59 11.44 9.02 2 337929 Transcript 0 11.10 0.00 3.06 2.62 7.73 2.21 7.69 3.86 4.86 0.51 226.79 100.62 144.22 220.26 167.22 362.19 290.79 0.00 0.00 0.00 0.00 7.35 8.56 3 395755 Transcript 0 1.81 0.00 0.00 0.44 2.33 0.39 0.28 0.55 1.18 0.00 116.03 14.35 44.89 67.19 113.78 94.68 68.50 0.00 0.00 0.00 0.00 2.24 0.69 4 395754 Transcript 1 5.19 0.00 0.00 0.00 1.31 0.00 0.65 0.00 1.80 0.00 83.61 5.39 8.57 9.23 27.40 83.24 38.81 1.55 0.00 0.00 0.00 0.51 2.88 5 IG31_AR3 ActiveIntergenicRegion 0 2.88 0.00 0.00 0.00 0.00 0.00 1.80 0.00 0.00 0.00 1.47 0.69 0.00 0.58 0.00 2.38 1.98 0.00 0.00 0.00 1.15 4.25 10.69 6 IG31_AR4 ActiveIntergenicRegion 0 4.63 0.00 0.00 0.00 0.00 0.00 1.65 0.00 0.00 0.00 1.13 3.76 0.00 2.08 0.00 4.49 2.18 0.00 0.00 0.00 1.54 7.86 11.41 7 IG31_AR5 ActiveIntergenicRegion 0 7.77 0.00 0.00 1.74 0.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.10 0.71 0.00 2.54 0.00 0.00 0.00 0.00 0.63 4.12 10.83 8 IG31_AR10 ActiveIntergenicRegion 0 5.90 0.00 0.00 0.00 3.75 1.71 2.97 0.24 0.52 0.16 20.93 6.07 4.38 23.02 24.22 40.11 26.63 0.00 0.00 0.00 0.00 1.17 1.10 9 ER1a ExonRegion 0 11.67 0.00 1.30 1.14 11.22 4.42 8.89 3.29 6.37 1.03 252.21 89.01 122.70 221.90 195.11 371.40 269.46 0.00 0.00 0.00 0.00 5.94 12.76 10 E1a_E4a KnownJunction 0 10.52 0.00 4.82 4.10 4.24 0.00 6.49 4.44 3.36 0.00 201.37 112.24 165.74 218.61 139.32 352.98 312.11 0.00 0.00 0.00 0.00 8.76 4.35 11 E2_Aa NovelBoundary 0 6.59 0.00 0.00 0.00 15.11 0.00 0.00 0.00 4.48 0.00 137.40 24.91 80.35 63.45 86.16 150.64 80.69 0.00 0.00 0.00 0.00 3.00 4.35 12 ER2a ExonRegion 0 3.63 0.00 0.00 0.87 4.65 0.79 0.57 1.10 2.37 0.00 123.30 28.71 38.15 69.35 119.27 89.46 103.80 0.00 0.00 0.00 0.00 1.47 1.38 13 E2a_E4a KnownJunction 1 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 108.76 0.00 51.62 65.04 108.29 99.89 33.19 0.00 0.00 0.00 0.00 3.00 0.00 14 I2_SR2 SilentIntronRegion 0 8.16 0.05 0.04 0.50 7.24 0.33 3.94 2.67 2.86 0.23 13.52 23.71 31.15 6.91 22.79 42.51 30.67 0.00 0.00 0.00 0.00 0.33 0.66 15 ER3a ExonRegion 1 10.38 0.00 0.00 0.00 2.62 0.00 1.30 0.00 3.60 0.00 142.27 10.78 17.14 13.52 44.66 134.17 60.88 0.99 0.00 0.00 0.00 1.02 5.76 16 E3_Da NovelBoundary 0 0.00 0.00 0.00 0.00 8.23 0.00 1.77 1.81 3.62 0.00 7.05 6.00 27.27 7.42 19.66 55.71 29.55 0.00 0.00 0.00 0.00 0.00 12.63 17 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.95 0.00 0.00 4.94 10.14 32.30 16.74 2.11 0.00 0.00 0.00 0.00 0.00 18 ER4a ExonRegion 0 10.97 0.00 3.86 2.77 7.86 0.37 3.20 5.58 5.47 2.06 311.55 87.72 165.67 282.72 321.91 371.01 283.72 0.57 0.00 0.00 0.47 9.23 11.29 19 E4a_E5a KnownJunction 0 9.48 0.00 3.46 2.06 10.44 2.50 2.25 5.91 7.20 8.97 388.99 98.88 84.73 293.43 348.48 295.14 464.89 0.00 0.00 0.00 2.78 3.12 7.94 20 I4_SR1 SilentIntronRegion 0 10.64 0.00 0.00 0.40 3.92 0.48 2.22 1.65 1.50 0.04 9.30 9.04 14.49 8.58 19.19 34.54 28.33 0.06 0.00 0.00 0.00 0.14 0.84 21 ER5a ExonRegion 0 25.11 0.00 1.65 3.96 9.48 1.37 4.16 10.44 5.54 3.90 647.26 106.64 164.70 423.06 387.95 619.21 581.73 0.09 0.00 0.00 0.79 8.41 14.28 22 E5a_E6a KnownJunction 0 16.30 0.00 3.67 3.40 3.31 2.44 1.68 7.27 4.83 1.13 421.26 158.45 180.67 447.88 430.68 674.18 305.94 0.00 0.00 0.00 0.00 10.41 19.89 23 E5a_E7a NovelJunction 0 0.00 0.00 3.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.90 0.00 0.00 2.24 19.53 33.07 12.34 0.00 0.00 0.00 0.00 0.00 0.00 24 ER6a ExonRegion 0 32.29 0.00 4.89 4.05 20.47 4.14 6.80 12.05 9.19 10.92 652.99 172.53 276.74 443.90 381.89 550.91 521.05 1.13 0.00 0.54 0.00 15.33 8.25 25 E6a_E7a KnownJunction 0 23.93 0.00 1.83 3.66 12.31 7.55 0.00 9.36 7.93 5.86 612.94 135.64 161.68 420.92 387.42 475.94 437.87 0.00 0.00 2.75 0.00 23.45 4.35 26 E6a_E8a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27.06 0.00 0.00 7.36 0.00 15.72 33.94 0.00 0.00 0.00 0.00 0.00 0.00 27 I6 Intron 0 11.23 0.19 1.64 1.36 4.44 0.17 2.29 5.52 3.40 2.68 15.34 14.23 26.59 21.63 31.19 53.47 34.19 0.59 0.00 1.18 0.00 0.48 0.75 28 I6_SR1 SilentIntronRegion 0 11.10 0.16 1.77 1.35 4.32 0.05 2.37 5.60 3.62 2.84 15.37 15.13 27.09 21.27 31.22 52.99 34.68 0.52 0.00 1.14 0.00 0.53 0.83 29 I6_AR1 ActiveIntronRegion 0 12.57 0.49 0.44 1.46 5.67 1.32 1.57 4.87 1.32 1.21 15.22 5.98 22.15 25.27 31.12 58.55 29.89 1.32 0.00 1.53 0.00 0.00 0.00 30 E7_Aa NovelBoundary 0 72.46 0.00 3.67 3.16 22.50 0.00 8.97 5.87 3.53 3.60 39.38 11.70 6.82 36.91 32.63 91.51 63.86 0.00 0.00 0.00 0.00 2.82 4.01 31 ER7a ExonRegion 0 45.95 0.00 2.06 4.80 31.88 1.83 8.85 11.91 10.14 10.72 700.94 185.02 253.20 519.52 333.64 611.64 577.59 2.42 1.05 2.79 0.00 14.41 5.85 32 E7a_E8a KnownJunction 0 59.42 0.00 0.00 6.86 17.91 11.13 4.15 2.26 8.77 10.99 624.00 161.60 259.89 453.88 275.91 600.18 419.26 0.00 0.00 0.00 0.00 13.23 8.02 33 I7_AR1 ActiveIntronRegion 0 14.78 0.36 1.48 0.00 8.47 5.58 1.62 2.53 1.33 1.76 19.76 31.21 24.29 19.59 16.07 48.09 27.10 0.00 0.00 0.10 0.00 1.71 1.97 34 I7_SR2 SilentIntronRegion 0 11.71 0.36 0.22 0.20 3.72 0.18 2.18 2.00 1.48 1.68 18.81 20.62 20.01 11.60 19.35 42.79 34.17 0.00 0.00 0.20 0.00 0.36 1.81 35 E8_Aa NovelBoundary 0 27.86 0.00 0.00 0.00 8.57 2.50 1.99 2.55 0.00 4.54 18.11 6.30 6.82 0.00 31.28 66.22 49.18 2.53 0.00 0.00 0.00 0.00 0.00 36 ER8a ExonRegion 0 45.18 0.00 0.00 5.90 31.52 4.79 8.87 15.53 6.74 14.90 771.76 161.94 224.28 520.14 386.52 661.33 604.08 1.58 0.00 0.01 0.11 14.19 9.63 37 E8a_E9a KnownJunction 0 67.20 0.00 0.00 3.06 20.63 2.90 6.36 7.48 9.66 18.59 849.85 187.71 307.77 529.82 410.90 759.97 636.28 0.00 0.00 0.00 2.47 24.98 0.00 38 I8 Intron 0 16.67 0.00 0.72 0.00 7.90 0.36 3.91 1.52 0.36 1.35 12.18 2.71 16.19 11.17 13.85 31.02 18.20 0.36 0.63 1.26 0.00 0.41 0.58 39 I8_SR1 SilentIntronRegion 0 16.87 0.00 0.73 0.00 8.00 0.37 3.96 1.54 0.37 1.36 12.31 2.72 16.32 11.31 14.01 31.37 18.41 0.37 0.63 1.27 0.00 0.42 0.59 40 E9_Aa NovelBoundary 0 34.38 0.00 0.00 0.00 10.78 0.00 6.49 9.16 5.90 0.00 17.64 5.85 20.45 12.54 5.93 48.62 16.36 2.57 0.00 2.56 0.00 0.00 0.00 41 ER9a ExonRegion 0 67.47 0.00 1.49 5.94 41.69 7.08 11.37 21.33 6.24 11.62 796.55 185.65 257.25 552.28 482.48 836.09 610.10 0.00 0.00 3.26 0.93 12.83 10.37 42 E9_Da NovelBoundary 0 23.49 0.00 2.96 0.00 4.16 0.00 0.00 14.05 4.25 2.53 2.68 18.01 12.82 6.83 32.88 17.26 20.29 0.00 0.00 0.00 0.00 0.00 0.00 43 E9a_E10a KnownJunction 0 60.60 0.00 3.19 2.83 44.40 13.97 15.19 15.90 5.53 6.82 702.60 165.80 199.34 466.83 496.45 702.55 542.87 0.00 0.00 0.00 0.00 3.12 12.21 44 ER10a ExonRegion 0 48.06 0.00 1.64 7.28 23.20 6.46 5.25 8.35 5.68 6.66 688.68 151.21 155.34 492.13 375.29 604.50 626.04 0.05 0.00 1.32 1.37 14.53 11.75 45 E10a_E11a KnownJunction 0 44.01 0.00 0.00 11.15 19.44 4.77 8.44 7.15 7.20 12.17 607.94 126.64 145.12 494.91 322.89 601.38 528.94 0.00 0.00 0.00 0.00 24.86 4.18 46 I10_SR1 SilentIntronRegion 0 11.77 0.13 0.35 0.26 4.73 0.70 3.10 2.44 2.68 1.84 20.15 12.22 16.24 13.77 19.62 32.31 25.87 1.33 0.00 1.21 0.00 0.92 0.55 47 E11_Aa NovelBoundary 0 6.52 7.89 16.59 10.45 10.10 0.00 4.46 35.04 7.18 17.03 9.48 13.95 0.00 2.47 9.39 12.22 25.53 11.94 4.80 8.56 0.00 3.12 0.00 48 ER11a ExonRegion 0 70.62 2.44 10.43 8.68 31.17 6.11 12.13 33.54 16.58 19.95 589.44 115.65 165.25 424.34 482.44 579.25 460.47 9.34 4.93 8.95 0.72 13.26 9.74 49 E11_Da KnownBoundary 0 45.49 3.35 1.57 7.16 58.66 18.57 22.66 11.67 2.86 5.64 305.76 200.32 230.34 301.37 222.88 364.43 237.03 5.35 4.80 0.00 0.00 9.19 0.00 50 ER11b ExonRegion 0 40.14 3.73 1.63 3.16 14.99 9.04 9.54 11.59 2.18 6.00 148.87 118.60 118.56 144.70 132.09 182.42 177.94 4.67 7.95 4.14 1.43 4.35 1.90 51 IG32_SR1 SilentIntergenicRegion 0 32.56 1.07 4.74 1.95 12.56 3.82 8.65 15.90 3.44 9.30 154.24 34.21 70.53 138.02 180.14 176.23 158.48 5.68 2.75 5.97 0.12 3.29 2.32 52 IG32_AR4 ActiveIntergenicRegion 0 0.69 4.29 4.62 1.32 0.87 1.79 6.45 18.28 8.86 16.66 0.00 1.16 1.52 2.36 0.00 0.00 2.99 7.76 2.05 12.44 0.00 0.00 1.91