Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 YPEL3 Gene 0 320.88 118.65 228.12 209.87 98.10 173.23 54.22 227.18 242.75 216.50 22.74 22.54 31.48 49.04 90.43 62.75 50.27 96.53 59.45 71.91 99.68 127.66 62.01 2 398838 Transcript 0 30.30 19.77 16.30 6.50 13.68 67.99 13.01 11.65 24.59 25.42 8.79 0.00 3.08 13.54 6.41 14.33 7.67 3.28 23.34 18.92 34.24 16.11 11.33 3 398841 Transcript 0 32.73 12.71 41.18 52.05 11.70 19.44 4.55 45.13 38.91 38.83 2.96 1.19 8.03 8.85 12.69 12.20 6.58 23.04 8.71 11.18 19.75 13.79 14.46 4 IG5_AR3 ActiveIntergenicRegion 0 1.43 1.89 0.77 1.55 5.88 19.55 4.37 3.70 3.89 6.65 0.16 0.00 0.00 0.50 0.17 0.25 0.00 5.13 2.96 4.32 1.30 0.00 1.24 5 ER1a ExonRegion 0 36.23 12.44 0.79 0.88 19.20 40.13 9.19 8.85 5.59 10.39 3.41 0.00 0.00 12.90 3.93 20.63 7.77 4.02 23.05 5.76 20.61 24.63 18.31 6 ER1b ExonRegion 0 92.49 28.27 25.16 6.39 25.87 104.95 27.80 33.96 32.46 44.26 6.02 1.77 0.00 19.11 12.11 30.70 17.02 27.36 50.53 15.47 25.14 36.19 36.84 7 E1_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.18 2.63 2.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E1a_E1c KnownJunction 0 24.37 27.10 31.81 12.12 8.15 95.85 16.83 14.46 43.58 40.45 14.16 0.00 6.17 14.19 8.90 8.03 7.57 2.53 23.62 32.09 47.88 7.59 4.35 9 ER1c ExonRegion 0 58.06 16.27 79.91 93.20 20.72 28.80 8.44 80.75 69.78 73.65 4.95 2.37 16.06 12.82 22.47 24.39 9.85 42.38 17.42 19.17 37.30 27.59 21.58 10 E1_Ac KnownBoundary 0 94.98 36.24 112.03 114.00 29.54 73.54 12.76 101.17 76.45 93.43 4.53 6.30 0.00 16.78 37.33 11.11 25.34 79.76 24.57 44.10 46.64 10.78 28.17 11 ER1d ExonRegion 0 213.70 66.09 234.69 228.47 72.95 159.72 42.16 216.94 244.62 235.64 23.40 24.57 28.60 63.01 95.34 75.07 56.08 101.24 73.60 92.53 115.02 102.95 73.58 12 E1b_E2a KnownJunction 0 472.60 112.94 344.49 313.68 122.67 261.55 70.57 308.71 330.78 290.16 28.06 29.71 59.25 85.88 135.73 88.44 46.28 198.56 95.34 156.92 153.58 187.44 117.37 13 ER2a ExonRegion 1 424.65 88.97 370.98 283.05 117.67 280.07 68.48 290.85 356.36 298.77 29.96 20.86 74.83 87.52 131.02 75.59 60.17 165.42 79.71 118.71 146.35 202.15 114.13 14 E2_Da NovelBoundary 0 72.46 12.37 59.55 43.28 79.37 67.97 18.37 40.50 31.45 48.43 0.00 0.00 0.00 17.66 19.66 3.33 0.00 26.32 8.38 12.46 25.45 14.76 0.00 15 E2a_E3a KnownJunction 0 824.07 127.28 402.00 265.60 214.26 367.63 68.50 321.49 383.50 316.11 50.07 18.16 73.70 72.87 141.91 96.73 66.48 149.19 61.27 103.87 161.30 206.72 90.14 16 I2 Intron 0 38.96 11.13 29.98 32.34 21.30 26.92 13.18 30.76 40.29 38.27 4.33 3.74 1.78 10.67 7.56 11.83 6.57 21.49 4.75 14.29 15.90 8.81 10.96 17 I2_AR1 ActiveIntronRegion 0 39.35 11.22 30.26 32.66 21.50 27.18 13.30 31.06 40.68 38.62 4.37 3.77 1.80 10.78 7.63 11.95 6.63 21.70 4.80 14.43 16.06 8.90 11.05 18 E3_Aa NovelBoundary 0 70.53 18.29 52.54 58.17 52.80 30.83 11.75 46.41 55.09 54.18 4.63 0.00 0.00 9.42 4.45 11.54 4.58 15.46 0.00 26.97 5.75 2.69 12.55 19 ER3a ExonRegion 0 595.65 194.27 447.43 295.32 121.69 296.55 78.31 410.82 509.88 411.14 59.49 40.99 40.45 83.90 149.40 83.66 87.00 128.90 69.99 122.95 181.43 187.98 81.74 20 E3_Da NovelBoundary 0 112.61 26.25 49.38 63.59 38.37 81.15 23.36 58.16 56.34 41.05 9.27 5.40 6.82 22.01 17.80 16.24 17.67 54.88 3.58 26.27 14.09 26.02 7.85 21 E3a_E4a KnownJunction 0 1359.87 344.61 514.80 434.94 193.63 389.78 121.09 578.53 590.42 461.43 46.64 74.27 33.60 110.25 233.02 141.33 90.88 197.28 95.63 210.61 194.04 208.32 116.69 22 I3 Intron 0 75.20 17.52 14.11 19.53 54.68 35.98 15.65 24.78 24.30 21.39 4.25 4.85 7.75 8.67 9.69 12.15 6.23 15.02 5.81 12.31 6.79 12.05 5.17 23 I3_AR1 ActiveIntronRegion 0 53.09 16.44 11.49 19.79 56.61 45.13 19.36 22.65 25.59 20.11 4.60 6.21 8.59 9.09 10.67 9.89 6.28 20.95 3.79 14.92 9.17 10.65 6.98 24 I3_AR2 ActiveIntronRegion 0 111.08 20.80 18.94 21.37 58.31 28.54 12.76 30.17 25.38 25.34 4.29 3.70 7.55 9.11 9.54 16.30 6.85 9.27 8.97 10.41 4.57 15.14 3.48 25 E4_Aa NovelBoundary 0 364.66 55.32 24.63 18.31 84.72 70.02 24.73 56.97 37.21 30.70 7.48 11.85 20.45 6.89 27.20 3.85 9.54 22.30 0.00 11.82 6.24 8.82 8.45 26 ER4a ExonRegion 0 709.78 287.74 418.41 388.26 225.01 358.56 122.18 434.16 462.56 398.44 42.26 50.71 55.66 89.87 184.78 113.36 103.04 173.74 110.92 135.28 175.75 277.29 110.97 27 ER4b ExonRegion 0 7.41 9.15 2.45 10.90 2.68 10.09 0.66 9.51 8.03 4.01 0.97 0.00 0.00 4.87 2.90 0.00 3.30 3.70 0.00 3.19 2.20 0.00 7.34