Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 IL4R Gene 0 287.59 3.47 44.98 31.00 123.64 18.35 26.20 54.85 38.93 27.46 172.32 33.01 77.23 140.86 105.42 324.57 83.17 13.39 10.56 4.23 132.62 453.50 356.23 2 380925 Transcript 0 33.00 0.00 0.81 0.00 5.60 8.32 7.88 3.21 1.79 2.82 14.95 3.15 3.33 13.65 4.82 58.79 8.60 0.00 0.00 0.00 11.28 24.56 48.60 3 380922 Transcript 0 12.63 0.00 4.68 2.38 22.83 5.35 9.28 1.00 0.72 0.67 13.66 1.39 6.18 7.14 4.22 18.04 7.25 0.54 0.00 0.83 4.62 18.84 23.00 4 449195 Transcript 1 71.03 0.00 6.55 2.76 24.99 0.44 10.61 5.70 5.63 3.78 7.63 7.05 15.79 19.63 4.06 37.80 7.39 2.75 0.90 0.60 19.01 71.84 55.03 5 395762 Transcript 0 12.70 0.00 0.00 1.36 10.70 0.00 0.00 0.00 1.24 0.00 1.93 0.00 0.00 1.62 0.00 5.94 0.00 0.00 0.00 0.00 0.00 2.08 5.87 6 170630 Transcript 0 32.81 0.51 4.29 2.73 7.36 4.13 4.30 4.75 4.32 5.16 33.83 3.25 14.07 19.08 15.96 84.71 20.63 1.39 0.80 0.53 31.40 79.17 76.35 7 IG30_AR2 ActiveIntergenicRegion 0 0.96 0.00 0.25 0.00 1.21 0.00 0.00 0.00 0.00 0.00 1.74 0.00 0.00 0.60 0.36 0.00 1.11 0.00 0.00 0.96 14.14 21.96 39.27 8 ER1a ExonRegion 0 1.69 0.00 0.00 0.00 0.00 0.00 0.00 1.73 0.00 0.00 5.41 0.00 0.00 2.27 0.00 0.00 0.00 0.00 0.00 0.00 3.97 4.17 6.46 9 ER1b ExonRegion 0 8.47 0.00 0.00 0.00 0.00 0.00 0.00 1.73 0.00 0.00 5.80 0.00 0.00 6.50 0.00 0.00 0.00 0.00 0.00 0.00 6.61 8.33 14.68 10 ER1c ExonRegion 1 144.30 0.55 1.73 1.33 72.12 19.24 26.82 9.65 5.44 7.89 60.35 2.87 4.74 36.99 36.58 213.33 30.23 2.14 7.34 0.00 32.49 94.27 133.80 11 E1a_E2a KnownJunction 0 137.58 6.64 4.70 1.86 175.64 13.69 57.81 18.52 11.05 10.72 67.07 0.00 5.84 29.96 30.04 165.60 36.47 2.40 0.00 0.00 27.24 71.15 93.90 12 E1a_E3b KnownJunction 0 64.31 0.00 1.63 0.00 11.21 16.64 15.77 4.68 3.59 5.64 24.48 6.30 6.66 25.02 9.64 117.58 17.20 0.00 0.00 0.00 18.59 44.95 90.74 13 I1 Intron 0 13.68 0.19 1.44 1.74 4.37 0.54 2.99 1.79 2.28 0.93 1.05 1.22 2.90 1.68 2.30 8.57 3.14 0.40 0.27 0.44 10.12 29.43 78.07 14 I1_SR1 SilentIntronRegion 0 8.62 0.00 1.54 0.70 3.42 0.12 2.54 1.48 3.21 0.69 0.86 1.43 1.48 1.45 1.85 7.25 3.59 0.53 0.41 0.54 11.57 21.41 74.34 15 I1_SR2 SilentIntronRegion 0 6.70 0.00 2.45 2.27 11.15 0.00 3.75 2.88 3.71 0.00 3.22 0.00 4.69 1.62 0.00 8.92 9.90 0.00 0.00 0.00 21.30 25.70 101.80 16 I1_AR3 ActiveIntronRegion 0 6.35 0.00 2.31 1.71 5.33 0.00 1.12 0.99 0.79 0.00 1.14 0.00 2.65 1.17 0.91 7.88 3.65 1.22 0.00 0.94 8.32 29.91 82.46 17 I1_SR3 SilentIntronRegion 0 14.41 0.43 0.96 1.06 3.08 0.19 4.02 0.00 1.73 0.72 1.21 0.37 5.20 1.41 2.14 8.40 3.46 0.29 0.33 0.00 6.22 23.78 77.81 18 I1_AR4 ActiveIntronRegion 0 10.01 0.40 0.18 1.19 1.83 1.56 2.18 1.34 1.78 0.75 0.87 0.00 3.04 1.54 1.61 8.40 5.23 0.67 0.00 0.42 8.59 18.35 72.68 19 I1_AR6 ActiveIntronRegion 0 22.34 0.00 0.32 0.77 3.09 3.08 3.57 1.48 2.57 0.55 3.38 0.00 5.69 1.32 2.99 4.27 10.99 0.41 0.00 1.05 11.45 18.85 73.67 20 I1_SR4 SilentIntronRegion 0 11.67 0.28 0.30 2.28 2.55 0.54 4.20 0.75 1.91 0.48 1.35 2.89 3.07 1.31 2.02 6.61 3.32 0.00 0.00 0.00 8.02 30.47 78.23 21 I1_AR7 ActiveIntronRegion 0 16.66 0.00 0.58 1.23 0.20 0.00 2.60 0.87 1.32 0.65 0.00 1.56 0.00 2.67 0.00 12.60 5.83 1.08 0.00 0.00 13.89 19.66 82.95 22 I1_SR5 SilentIntronRegion 0 19.36 0.29 1.59 2.41 5.96 0.45 3.95 2.77 2.38 1.35 1.25 1.89 3.73 1.94 3.21 10.67 2.96 0.32 0.52 0.60 11.94 38.43 96.15 23 E2_Aa NovelBoundary 0 160.99 0.00 1.33 9.42 27.67 2.90 10.51 2.09 0.00 1.10 2.00 0.00 6.82 2.41 4.45 8.54 12.53 0.00 0.00 0.00 7.97 53.21 125.06 24 ER2a ExonRegion 0 81.73 6.62 11.70 10.47 58.75 16.96 28.31 24.84 14.08 14.79 71.74 19.40 31.74 47.58 58.09 118.35 48.97 11.85 20.74 15.66 80.01 218.21 197.37 25 E2_Da NovelBoundary 0 69.49 46.77 59.96 90.13 29.80 18.46 47.47 113.28 85.85 42.42 18.11 0.00 6.49 10.89 0.00 68.79 48.06 118.39 55.53 51.20 29.53 52.66 163.56 26 E2a_E3b KnownJunction 0 114.84 0.00 18.42 10.02 27.42 0.00 1.85 17.05 15.48 18.02 115.24 7.35 43.50 70.87 46.73 257.88 64.14 4.60 0.00 2.62 85.44 298.08 212.72 27 ER3a ExonRegion 0 32.81 0.51 4.29 2.73 7.36 4.13 4.30 4.75 4.32 5.16 33.83 3.25 14.07 19.08 15.96 84.71 20.63 1.39 0.80 0.53 31.40 79.17 76.35 28 ER3b ExonRegion 0 71.77 0.02 17.79 16.81 23.96 9.19 4.25 29.22 13.43 17.61 134.08 21.70 60.32 74.19 52.59 238.97 61.12 10.13 7.40 3.28 138.66 263.41 271.32 29 E3a_E4a KnownJunction 0 3.56 0.00 3.64 2.06 7.98 0.00 0.00 0.00 0.00 0.00 9.90 0.00 0.00 4.41 0.00 7.18 9.16 0.00 0.00 0.00 2.41 5.14 4.35 30 E3a_E5a KnownJunction 0 23.71 0.00 17.44 12.22 34.13 16.58 0.00 30.23 14.90 17.27 161.30 23.41 58.92 78.93 68.61 161.24 51.15 4.31 0.00 2.43 109.72 198.64 225.53 31 ER4a ExonRegion 0 21.70 0.00 5.72 2.70 37.69 10.71 18.56 2.01 1.43 1.33 17.43 2.78 12.35 9.86 8.44 28.90 5.34 1.07 0.00 1.66 6.83 32.54 41.65 32 E4_Da NovelBoundary 0 85.20 0.00 6.89 4.73 47.03 0.00 19.21 7.43 7.12 4.65 18.06 0.00 12.82 24.90 10.26 53.06 23.00 4.68 0.00 0.00 21.37 84.81 116.01 33 I4_SR1 SilentIntronRegion 0 58.84 0.51 3.22 7.72 25.35 1.60 8.40 7.77 3.04 1.96 5.14 2.67 6.23 5.93 2.31 15.81 4.61 0.27 0.40 0.92 9.42 44.49 58.80 34 I4_SR2 SilentIntronRegion 0 37.87 0.00 4.70 7.85 14.75 0.00 5.73 6.12 5.14 1.80 1.51 4.33 6.08 12.12 3.92 10.12 5.00 1.85 0.00 1.04 9.95 44.54 72.38 35 ER5a ExonRegion 0 86.52 2.60 29.33 19.93 127.70 19.66 32.56 32.48 18.38 21.75 167.41 43.51 87.83 125.30 75.04 291.14 84.85 11.78 16.77 1.88 124.64 388.09 393.91 36 E5a_E6a KnownJunction 1 92.61 3.35 38.85 24.07 110.27 10.62 24.42 32.28 39.55 27.67 115.13 62.72 165.09 96.71 29.67 216.78 64.80 14.18 20.52 2.81 107.62 308.56 389.94 37 E6_Aa NovelBoundary 0 32.75 0.00 1.71 2.63 65.20 0.00 0.00 1.64 3.59 0.00 7.42 0.00 0.00 0.00 4.45 11.71 4.77 2.57 0.00 0.00 8.59 11.21 24.67 38 ER6a ExonRegion 0 67.27 2.39 35.73 16.79 45.93 9.98 12.53 40.20 35.32 29.75 197.49 48.56 144.84 170.67 94.12 350.59 91.64 13.60 10.77 5.94 118.46 437.20 383.83 39 E6a_E7a KnownJunction 0 87.05 0.00 47.49 17.41 48.56 2.78 8.21 71.43 53.33 21.84 266.75 31.96 117.69 120.31 113.11 354.52 95.56 19.57 12.80 3.26 139.25 515.16 366.12 40 E6a_E8a NovelJunction 0 3.78 0.00 1.51 1.63 7.13 0.00 0.00 0.00 0.00 3.28 14.42 0.00 6.82 28.67 8.90 38.96 7.85 0.00 0.00 0.00 3.15 14.14 23.22 41 I6 Intron 0 50.63 0.26 3.34 5.77 46.95 2.78 9.36 5.53 5.34 2.05 9.27 1.77 12.10 14.39 11.55 33.58 8.96 1.04 0.80 0.81 20.03 67.20 73.96 42 I6_AR2 ActiveIntronRegion 0 43.62 0.24 6.06 8.43 47.27 3.48 7.22 7.95 7.26 2.23 12.38 1.69 9.26 16.44 12.90 39.54 10.78 1.31 1.33 1.01 27.23 67.69 91.45 43 I6_SR2 SilentIntronRegion 0 73.92 0.36 0.32 3.55 59.81 2.56 14.79 3.60 3.86 2.39 6.75 2.40 19.85 14.68 12.46 29.58 6.92 0.96 0.00 0.74 14.24 83.31 68.21 44 E7_Aa NovelBoundary 0 155.21 2.70 0.00 12.15 32.00 0.00 1.99 10.60 7.47 2.39 22.11 16.06 26.95 21.48 21.51 54.34 36.37 2.11 0.00 2.49 30.95 144.39 112.68 45 ER7a ExonRegion 0 366.63 6.14 43.54 20.86 147.69 19.03 39.02 71.59 57.34 30.80 256.74 61.92 247.28 198.06 91.29 415.73 121.79 24.80 11.19 10.02 161.94 539.04 495.17 46 E7a_E8a KnownJunction 0 441.49 0.00 53.58 33.50 192.70 42.93 61.47 116.81 68.40 23.85 240.80 70.22 309.40 226.50 83.81 572.33 123.61 17.20 18.64 5.56 144.06 686.98 610.69 47 ER8a ExonRegion 0 204.84 2.18 37.36 24.95 83.02 10.36 22.72 45.96 44.81 26.88 211.52 59.76 208.27 176.29 87.85 383.73 102.10 17.91 15.56 5.23 156.44 492.31 417.25 48 E8_Da NovelBoundary 0 76.24 0.00 3.22 1.23 34.21 0.00 12.01 15.73 10.45 6.96 13.00 0.00 12.99 0.00 10.75 54.26 29.36 1.62 0.00 0.00 19.40 146.47 98.85 49 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.85 0.00 2.20 0.00 0.00 0.00 0.00 0.00 50 E8a_E10a KnownJunction 1 112.91 9.87 33.41 18.45 115.79 7.44 8.83 51.51 35.59 21.73 221.16 54.77 141.39 128.02 40.67 300.18 69.19 8.12 0.00 6.14 150.92 303.04 291.43 51 I8_AR1 ActiveIntronRegion 0 30.16 0.00 0.00 0.00 28.88 1.34 2.92 0.00 0.00 0.00 10.47 10.28 2.83 12.99 3.57 8.85 8.46 0.00 0.00 0.00 6.43 68.67 54.63 52 E9_Aa NovelBoundary 0 71.79 0.00 14.67 10.26 95.59 0.00 19.87 13.35 17.16 5.86 4.90 6.30 13.47 24.90 19.66 35.97 3.83 0.00 0.00 0.00 26.56 87.07 60.27 53 ER9a ExonRegion 0 19.65 0.00 2.28 1.36 9.75 1.18 3.50 1.73 1.32 1.23 0.69 0.31 13.74 3.48 0.00 19.74 1.41 1.85 0.00 0.00 4.25 18.01 19.51 54 ER9b ExonRegion 0 71.03 0.00 6.55 2.76 24.99 0.44 10.61 5.70 5.63 3.78 7.63 7.05 15.79 19.63 4.06 37.80 7.39 2.75 0.90 0.60 19.01 71.84 55.03 55 E9_Db NovelBoundary 0 89.94 0.00 5.82 5.83 73.43 4.77 33.48 4.07 9.35 5.80 13.27 5.85 6.33 18.25 17.80 49.90 0.00 0.00 0.00 0.00 16.99 69.44 69.83 56 ER10a ExonRegion 0 138.89 3.82 30.52 25.17 89.29 24.19 21.32 40.27 38.07 20.86 160.51 52.21 95.72 159.99 69.40 297.51 88.93 12.32 4.36 3.91 154.96 388.24 363.12 57 E10a_E11a KnownJunction 0 378.59 0.00 39.97 36.73 232.34 37.31 33.12 53.68 38.19 29.28 218.69 38.56 110.54 157.87 71.20 457.66 111.36 16.37 11.48 2.75 165.13 557.22 545.98 58 ER11a ExonRegion 0 242.52 1.24 38.28 20.74 164.27 20.59 25.98 41.20 30.14 20.11 180.44 48.77 129.60 172.28 93.76 352.40 103.04 11.62 12.62 3.61 138.33 436.83 421.80 59 E11a_E12a KnownJunction 0 242.19 0.00 39.56 19.24 101.78 0.00 19.92 42.39 23.03 11.50 134.93 24.61 127.59 148.33 75.90 272.58 84.62 9.24 9.13 3.26 110.21 345.48 302.44 60 E11a_E13a NovelJunction 0 13.93 0.00 14.10 2.06 0.00 0.00 2.16 2.55 12.73 0.00 9.79 0.00 18.18 11.89 0.00 25.04 13.09 0.00 0.00 0.00 4.94 37.23 15.96 61 I11_SR2 SilentIntronRegion 0 26.47 0.00 3.41 5.25 34.39 1.20 6.11 2.66 2.20 2.36 9.18 2.22 8.14 23.15 10.66 49.30 10.57 1.42 1.10 0.73 13.49 80.30 81.08 62 ER12a ExonRegion 0 175.25 1.95 37.57 18.92 78.51 12.91 14.70 44.97 24.33 12.75 126.60 46.76 134.60 131.16 82.51 298.46 66.61 12.90 11.53 4.81 99.34 450.25 347.46 63 E12_Da NovelBoundary 0 23.63 0.00 4.17 4.76 34.04 5.28 5.48 12.73 5.03 2.82 9.27 6.30 6.33 21.60 0.00 26.06 41.33 1.95 0.00 0.00 8.90 62.76 72.13 64 E12a_E13a KnownJunction 0 262.71 5.79 46.10 19.34 96.43 18.91 15.10 53.40 23.32 17.49 163.73 63.47 95.12 149.51 107.67 364.43 65.45 17.04 21.65 5.75 109.84 580.31 449.78 65 I12_AR1 ActiveIntronRegion 0 36.24 0.41 1.82 4.05 19.19 0.73 2.11 6.67 6.23 2.72 11.54 1.42 3.85 16.23 6.53 36.12 17.10 2.01 0.00 0.42 7.02 46.49 52.07 66 E13_Aa NovelBoundary 0 118.02 5.85 2.87 8.29 42.19 7.78 7.77 24.44 12.90 9.43 24.90 12.15 12.99 28.96 22.25 93.82 4.21 0.00 0.00 0.00 9.14 76.85 69.83 67 ER13a ExonRegion 0 377.03 4.11 57.30 40.62 151.46 21.25 28.91 68.52 47.46 33.25 196.63 32.48 64.63 160.37 131.96 372.86 93.18 14.71 11.04 3.88 152.21 538.56 398.37 68 ER13b ExonRegion 0 12.70 0.00 0.00 1.36 10.70 0.00 0.00 0.00 1.24 0.00 1.93 0.00 0.00 1.62 0.00 5.94 0.00 0.00 0.00 0.00 0.00 2.08 5.87 69 IG31_AR3 ActiveIntergenicRegion 0 2.88 0.00 0.00 0.00 0.00 0.00 1.80 0.00 0.00 0.00 1.47 0.69 0.00 0.58 0.00 2.38 1.98 0.00 0.00 0.00 1.15 4.25 10.69 70 IG31_AR4 ActiveIntergenicRegion 0 4.63 0.00 0.00 0.00 0.00 0.00 1.65 0.00 0.00 0.00 1.13 3.76 0.00 2.08 0.00 4.49 2.18 0.00 0.00 0.00 1.54 7.86 11.41 71 IG31_AR5 ActiveIntergenicRegion 0 7.77 0.00 0.00 1.74 0.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.10 0.71 0.00 2.54 0.00 0.00 0.00 0.00 0.63 4.12 10.83 72 IG31_AR10 ActiveIntergenicRegion 0 5.90 0.00 0.00 0.00 3.75 1.71 2.97 0.24 0.52 0.16 20.93 6.07 4.38 23.02 24.22 40.11 26.63 0.00 0.00 0.00 0.00 1.17 1.10