Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 EME2 Gene 0 27.40 8.10 56.31 15.00 15.93 21.10 17.91 46.51 52.06 62.18 46.10 10.38 9.58 52.87 63.71 32.69 31.14 64.65 24.70 40.35 35.90 20.74 25.60 2 454910 Transcript 0 1.89 0.00 8.26 0.00 2.16 1.33 0.00 9.82 3.53 7.53 12.11 2.70 0.00 19.72 11.43 6.37 6.59 7.30 1.93 9.08 5.59 1.56 0.00 3 307394 Transcript 0 2.74 0.00 10.94 4.93 6.28 6.30 1.63 4.56 7.49 9.94 5.79 0.00 0.00 6.42 4.33 6.32 3.27 9.20 0.00 11.70 6.86 0.00 2.99 4 422472 Transcript 0 10.63 1.38 38.33 10.41 11.99 15.27 13.23 33.19 45.15 54.03 47.97 19.21 10.24 44.53 67.09 35.87 39.81 68.04 21.58 31.54 29.68 13.81 26.56 5 ER1a ExonRegion 0 0.79 1.05 2.95 1.72 2.97 5.63 1.36 5.80 4.74 5.26 10.23 2.32 2.98 10.04 11.34 3.21 3.17 9.65 5.95 2.71 5.05 1.07 7.92 6 E1_Ab KnownBoundary 0 3.41 0.00 8.87 6.69 0.00 0.00 0.00 13.97 14.41 12.41 19.85 6.15 6.82 21.90 14.09 12.90 9.54 13.06 7.81 3.07 5.62 0.00 8.37 7 ER1b ExonRegion 0 1.66 0.00 7.91 2.90 1.90 0.51 1.45 5.94 4.13 11.08 16.40 4.33 2.98 13.83 15.56 5.50 11.87 13.43 3.44 3.69 4.05 1.20 5.56 8 E1_Da NovelBoundary 0 0.00 0.00 3.52 1.47 0.00 0.00 0.00 8.79 14.61 14.29 11.85 6.30 0.00 4.94 14.96 3.93 14.03 8.66 4.71 0.00 2.90 0.00 3.16 9 E1a_E2a KnownJunction 0 0.00 0.00 14.78 2.80 3.57 2.44 4.28 14.46 5.90 16.98 32.27 6.00 8.28 13.89 31.65 15.21 47.87 58.74 4.24 9.01 8.15 11.39 12.29 10 E2_Aa NovelBoundary 0 0.00 0.00 4.26 0.00 0.00 0.00 2.16 6.16 25.52 11.95 11.58 6.30 0.00 23.60 8.90 4.36 13.00 8.91 4.80 0.00 5.19 2.94 0.00 11 ER2a ExonRegion 0 0.83 2.24 18.34 2.28 7.56 4.87 7.31 25.42 14.00 20.75 38.21 10.81 3.77 29.68 37.44 16.01 30.77 33.19 11.70 11.03 24.16 9.90 14.73 12 E2a_E3a KnownJunction 0 3.78 3.29 17.09 5.36 3.90 0.00 0.00 16.68 19.04 22.43 33.53 0.00 0.00 36.38 34.37 7.69 21.51 18.86 4.80 7.99 31.88 10.47 8.71 13 I2 Intron 0 2.58 0.50 16.04 2.48 2.94 4.92 5.65 9.43 10.55 12.30 8.96 1.18 0.88 4.21 12.31 3.63 2.82 11.32 6.61 7.01 2.69 3.81 3.58 14 I2_SR1 SilentIntronRegion 0 2.59 0.50 16.12 2.49 2.95 4.95 5.68 9.47 10.61 12.36 9.00 1.19 0.88 4.23 12.36 3.64 2.83 11.38 6.64 7.05 2.70 3.83 3.60 15 E3_Aa NovelBoundary 0 0.00 0.00 13.22 0.00 4.33 2.44 4.50 3.98 12.76 6.72 2.00 0.00 0.00 0.00 14.83 8.12 0.00 10.11 4.80 20.58 0.00 4.78 4.18 16 ER3a ExonRegion 0 10.51 0.11 24.52 3.22 9.47 11.16 9.17 31.07 28.87 37.34 39.32 9.31 9.23 52.11 42.21 18.31 37.06 45.60 12.88 27.87 34.83 17.79 18.38 17 E3_Da NovelBoundary 0 2.74 0.00 19.57 3.60 3.82 15.22 16.38 8.26 16.17 16.92 9.63 5.85 0.00 11.60 9.64 4.10 8.79 12.44 8.85 5.88 14.70 14.57 0.00 18 E3a_E4a KnownJunction 0 6.59 0.00 37.91 6.39 3.74 0.00 5.52 24.27 40.45 46.85 53.17 17.86 6.82 28.43 28.31 20.08 30.11 56.63 16.28 17.58 24.83 22.23 32.95 19 I3 Intron 0 3.29 1.66 18.68 3.46 4.36 9.92 7.95 11.84 17.46 17.99 10.89 3.96 3.35 11.94 22.62 5.07 8.56 24.24 16.06 10.88 12.57 4.48 6.75 20 I3_SR1 SilentIntronRegion 0 3.38 1.93 18.80 3.43 4.49 11.02 8.47 12.16 17.82 20.04 11.67 4.09 2.95 12.47 22.15 5.61 8.31 26.06 18.04 11.16 13.43 4.64 7.45 21 I3_AR1 ActiveIntronRegion 0 2.83 0.00 18.30 3.72 3.66 3.30 4.89 10.08 15.60 5.65 6.29 3.28 5.92 8.87 25.99 1.78 10.35 13.46 4.06 9.38 7.47 3.57 2.53 22 E4_Aa NovelBoundary 0 17.04 3.35 44.08 4.59 12.22 30.10 19.25 23.78 26.91 27.05 20.69 11.40 0.00 4.65 31.15 7.69 8.23 53.68 44.61 13.04 14.52 3.12 11.10 23 ER4a ExonRegion 0 14.88 1.39 41.49 7.35 4.48 12.32 12.59 34.91 41.24 41.06 35.86 20.66 18.10 47.43 84.86 17.22 24.90 45.73 18.35 38.85 37.08 14.99 15.39 24 E4_Da KnownBoundary 0 29.41 2.70 36.84 12.22 8.32 13.12 28.71 37.01 27.75 32.29 12.90 11.85 32.95 44.26 95.56 12.39 12.16 37.72 4.80 32.92 34.41 22.90 15.19 25 E4a_E4c KnownJunction 0 3.78 0.00 16.53 0.00 4.33 2.67 0.00 19.63 7.06 15.07 24.22 5.40 0.00 39.44 22.87 12.73 13.18 14.59 3.86 18.15 11.18 3.12 0.00 26 ER4b ExonRegion 0 18.18 1.82 31.23 11.39 12.33 10.02 12.32 18.92 26.36 27.22 25.06 1.31 15.41 40.75 52.95 16.35 10.37 39.33 3.58 30.70 26.92 14.40 21.24 27 E4_Db KnownBoundary 0 10.52 0.00 31.96 8.82 24.02 13.23 12.10 4.81 29.17 26.97 28.01 0.00 6.82 46.68 48.83 23.50 19.92 39.55 12.52 36.62 25.51 10.96 20.74 28 E4b_E4b KnownJunction 0 2.74 0.00 10.94 4.93 6.28 6.30 1.63 4.56 7.49 9.94 5.79 0.00 0.00 6.42 4.33 6.32 3.27 9.20 0.00 11.70 6.86 0.00 2.99 29 ER4c ExonRegion 0 9.21 4.15 31.19 7.03 10.34 8.63 17.34 14.95 34.70 41.63 28.35 8.40 9.29 38.66 56.26 20.98 36.96 53.19 21.55 23.86 15.08 13.52 27.52 30 E4_Ab KnownBoundary 0 6.96 6.38 25.52 9.36 3.99 17.83 13.82 25.34 38.45 50.55 13.85 24.61 20.13 40.67 90.98 27.60 26.37 57.21 29.93 30.04 25.58 18.55 32.78 31 ER4d ExonRegion 0 2.87 1.10 38.87 7.17 6.44 11.90 10.92 21.51 37.54 48.79 23.75 7.35 13.64 50.48 66.31 30.97 25.93 73.52 24.85 35.39 28.27 16.20 22.49 32 E4_Ac KnownBoundary 0 0.00 0.00 56.83 3.53 3.99 23.23 14.35 28.01 45.60 59.50 33.96 6.60 33.28 64.87 92.71 23.75 33.47 98.20 25.13 30.55 30.70 11.88 36.71 33 ER4e ExonRegion 0 5.76 2.10 55.91 7.22 5.52 13.66 14.93 32.08 44.82 60.87 52.58 16.71 28.14 56.65 84.64 31.93 47.49 85.16 20.41 39.53 36.56 13.89 30.44 34 E4_Dc NovelBoundary 0 0.00 0.00 3.37 0.00 0.00 2.73 12.98 2.30 8.07 12.71 12.37 0.00 0.00 2.30 5.19 4.10 13.65 10.40 4.14 2.49 0.00 0.00 4.10 35 E4c_E5a KnownJunction 0 3.63 0.00 38.20 17.28 4.33 16.41 8.61 45.51 47.63 60.95 52.01 17.71 7.95 41.67 64.40 29.99 30.20 77.81 21.08 37.46 45.78 8.76 24.07 36 E4_Dd NovelBoundary 0 3.70 0.00 3.67 2.06 0.00 0.00 4.15 4.72 11.14 4.30 12.69 0.00 0.00 0.00 4.45 0.00 4.77 9.45 13.84 12.27 6.30 2.88 4.35 37 E4d_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 ER4f ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.17 3.34 0.08 1.18 3.28 8.19 0.21 0.22 0.77 0.00 0.00 9.12 1.85 0.00 1.11 0.31 0.00 0.14 39 I4 Intron 1 0.00 0.00 2.68 0.00 0.98 0.00 3.40 0.00 4.73 3.14 4.26 0.00 0.00 3.72 15.90 3.27 0.00 5.05 4.67 2.34 2.43 1.53 0.00 40 I4_SR1 SilentIntronRegion 1 0.00 0.00 2.72 0.00 1.00 0.00 3.45 0.00 4.79 3.18 4.32 0.00 0.00 3.77 16.09 3.32 0.00 5.13 4.74 2.38 2.46 1.55 0.00 41 E5_Aa NovelBoundary 0 7.26 0.00 12.09 0.00 3.14 0.00 1.81 4.76 6.02 2.23 14.79 7.65 0.00 4.94 8.90 0.00 13.18 17.37 4.52 8.44 11.24 0.00 4.35 42 ER5a ExonRegion 0 6.51 2.68 48.16 8.86 9.62 16.52 15.13 34.67 53.21 57.94 62.82 26.98 10.55 56.77 71.03 36.87 44.65 81.72 24.88 51.34 46.28 20.84 28.48 43 E5_Da KnownBoundary 0 0.00 0.00 1.12 0.00 0.00 0.00 7.82 1.68 6.77 2.77 2.53 0.00 0.00 0.00 9.52 3.25 3.83 2.03 12.71 9.20 2.78 0.00 0.00 44 E5a_E6a KnownJunction 0 19.04 0.00 45.59 6.93 21.31 20.78 13.73 39.10 53.12 59.53 63.54 31.51 13.47 53.27 80.60 56.65 52.27 73.12 22.12 33.30 28.17 19.17 28.08 45 ER5b ExonRegion 0 0.00 0.00 0.23 0.00 0.00 0.04 2.65 0.41 3.91 1.37 1.61 0.10 0.00 1.20 5.04 1.49 0.79 0.79 5.38 2.84 1.99 0.00 0.00 46 E5b_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 ER6a ExonRegion 0 9.21 1.94 31.60 8.06 6.35 9.10 13.48 26.93 43.17 44.96 37.65 15.08 11.03 51.25 72.12 27.30 26.42 54.13 17.96 42.36 34.88 22.11 25.10 48 E6a_E7a KnownJunction 0 12.89 8.68 40.06 8.26 8.66 14.20 8.21 34.67 44.47 45.48 34.22 26.11 13.64 42.85 71.57 35.03 24.12 39.51 0.00 40.59 32.19 13.29 31.33 49 ER7a ExonRegion 0 11.07 5.85 38.73 10.51 8.97 15.66 13.38 33.31 50.02 38.40 36.73 26.79 16.02 52.99 62.74 33.25 31.01 38.65 11.22 45.61 33.70 13.37 24.96 50 E7_Da KnownBoundary 0 10.67 6.05 44.74 12.95 12.82 26.63 16.34 27.97 63.74 41.50 36.64 25.51 32.79 60.75 46.48 48.62 35.16 62.30 22.02 38.16 30.46 8.88 29.02 51 E7a_E7b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52 ER7b ExonRegion 0 4.23 3.17 28.81 6.97 11.08 19.45 18.38 22.35 47.88 39.66 45.81 8.66 18.00 50.80 72.67 26.61 23.11 48.08 22.82 48.54 27.37 16.18 10.86 53 E7_Ab KnownBoundary 0 3.33 3.35 27.47 5.59 8.49 9.71 22.21 24.36 43.34 44.83 45.91 0.00 18.51 53.15 42.52 21.96 13.37 46.10 35.86 63.53 25.33 22.96 7.85 54 ER7c ExonRegion 0 9.89 0.56 46.89 3.22 10.44 18.36 15.01 26.73 40.37 45.46 48.64 7.25 11.14 48.66 82.50 19.76 21.04 48.46 24.77 49.18 30.38 15.44 13.62 55 E7_Db KnownBoundary 0 13.19 0.00 76.14 8.62 22.58 19.19 7.91 33.68 62.38 50.04 46.01 0.00 6.82 50.50 52.54 12.39 26.46 59.53 27.29 48.96 29.41 19.17 30.05 56 ER7d ExonRegion 0 33.99 10.13 64.96 17.97 18.86 24.72 20.30 54.04 58.92 70.90 49.83 10.02 9.30 57.10 66.97 36.68 32.89 70.92 27.78 43.93 38.99 23.21 28.05