Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CASKIN1 Gene 0 1.54 14.59 58.85 14.06 7.43 29.30 6.83 57.76 63.57 45.38 0.81 0.22 0.15 0.21 0.51 0.00 1.12 54.88 37.06 38.60 1.30 1.27 1.89 2 382453 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 343516 Transcript 0 0.99 7.56 35.81 8.09 2.82 13.97 2.65 36.60 36.52 26.23 0.65 0.15 0.00 0.11 0.38 0.00 1.20 25.67 21.16 18.61 0.53 0.41 0.51 4 ER1a ExonRegion 0 0.00 1.45 20.94 1.57 0.28 5.47 2.63 9.90 20.59 14.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.41 9.51 12.38 0.00 0.00 1.19 5 E1a_E2a KnownJunction 0 0.00 8.49 29.30 2.60 3.74 15.22 7.33 24.03 39.15 29.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.60 21.65 30.49 0.00 0.00 0.00 6 E2_Aa NovelBoundary 0 0.00 0.00 6.71 0.00 4.33 2.56 0.00 2.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.17 0.00 7.73 0.00 0.00 0.00 7 ER2a ExonRegion 0 0.00 13.57 46.56 6.95 7.77 12.17 7.10 55.81 52.09 40.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 81.91 34.43 52.45 3.26 1.08 0.11 8 E2a_E3a KnownJunction 0 0.00 29.86 72.65 14.98 19.86 9.82 8.26 86.05 75.87 52.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 107.57 31.34 78.23 5.37 2.94 0.00 9 ER3a ExonRegion 0 1.10 17.26 78.40 15.70 14.53 24.72 5.78 72.61 86.14 58.82 1.30 0.00 0.00 0.35 1.21 0.00 0.00 89.33 50.41 68.24 0.56 3.32 1.47 10 E3a_E4a KnownJunction 0 0.00 2.43 75.04 15.92 4.16 37.48 11.48 77.84 101.79 58.42 7.05 0.00 0.00 2.47 5.07 0.00 0.00 98.00 80.76 73.95 0.00 5.08 0.00 11 ER4a ExonRegion 0 1.48 11.21 86.84 23.67 6.80 34.90 6.40 81.21 99.66 67.41 3.57 0.00 3.28 0.23 0.20 0.00 1.15 97.55 67.94 67.95 0.80 2.03 1.79 12 E4a_E5a KnownJunction 0 0.00 20.59 107.24 37.69 16.13 62.18 13.82 85.52 118.46 101.54 7.00 0.00 0.00 0.00 0.00 0.00 0.00 144.59 57.60 75.29 0.00 3.06 3.76 13 ER5a ExonRegion 0 1.12 13.62 75.48 18.70 14.02 24.41 16.40 76.74 105.64 71.55 4.45 0.00 0.00 0.00 0.00 0.00 0.00 118.10 51.46 66.69 4.52 2.91 0.76 14 E5a_E6a KnownJunction 0 0.00 28.22 73.50 19.54 11.38 21.75 7.73 78.45 89.29 61.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 122.33 21.74 51.39 6.05 0.00 3.67 15 ER6a ExonRegion 0 1.03 26.39 66.12 18.85 11.85 34.03 11.30 63.82 84.74 51.42 0.81 0.00 0.00 0.00 0.80 0.00 0.00 81.81 49.41 61.39 2.00 1.92 3.16 16 E6_Da NovelBoundary 0 0.00 19.60 20.08 6.86 0.00 17.60 3.84 15.07 10.07 12.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.93 7.44 9.65 2.72 2.94 0.00 17 E6a_E7a KnownJunction 0 3.41 28.68 54.94 12.19 7.64 40.66 4.11 78.49 80.35 32.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 55.17 17.60 53.50 2.66 3.06 0.00 18 Ix Intron 0 0.56 4.85 12.58 2.69 2.48 4.86 1.05 4.78 9.26 5.21 0.00 0.00 0.00 0.18 0.00 0.00 0.44 21.54 11.39 6.20 0.29 0.55 0.78 19 Ix_SR1 SilentIntronRegion 0 0.56 4.87 12.64 2.70 2.49 4.88 1.06 4.81 9.31 5.24 0.00 0.00 0.00 0.18 0.00 0.00 0.44 21.65 11.45 6.23 0.29 0.55 0.78 20 E7_Aa NovelBoundary 0 3.48 12.17 38.23 8.92 3.57 20.84 12.50 22.88 27.72 18.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.89 26.64 11.95 2.90 0.00 0.00 21 ER7a ExonRegion 0 2.12 26.03 69.41 15.35 9.25 31.02 8.55 45.62 73.76 50.23 0.00 0.00 0.00 0.00 0.96 0.00 3.97 72.23 39.01 51.67 1.82 2.56 1.51 22 E7a_E8a KnownJunction 0 9.71 42.36 118.83 20.24 16.64 33.96 22.39 57.54 113.95 67.50 0.00 0.00 0.00 0.00 0.00 0.00 4.39 108.23 62.78 47.49 0.00 0.00 0.00 23 ER8a ExonRegion 0 5.22 22.01 95.14 20.16 13.28 36.22 12.44 69.41 106.47 58.79 0.98 1.67 0.00 0.00 2.87 0.00 2.45 105.92 67.45 72.46 1.03 0.00 4.74 24 E8_Da NovelBoundary 0 3.78 12.50 24.78 7.99 6.54 30.55 3.97 49.99 33.62 25.68 0.00 5.85 0.00 0.00 0.00 0.00 0.00 41.99 18.92 20.45 0.00 0.00 0.00 25 E8a_E9a KnownJunction 0 3.56 6.18 102.18 29.67 12.05 31.69 6.18 55.04 94.94 47.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 62.93 58.07 60.79 0.00 0.00 4.35 26 E9_Aa NovelBoundary 0 7.11 11.84 37.02 15.45 11.71 27.37 2.03 50.07 42.07 41.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 61.43 16.38 32.09 0.00 0.00 0.00 27 ER9a ExonRegion 0 3.45 24.60 92.86 27.52 5.10 47.95 14.74 79.89 84.94 61.63 1.71 0.00 0.00 0.00 0.00 0.00 1.49 106.66 67.63 83.58 2.06 1.29 2.91 28 E9_Da NovelBoundary 0 0.00 2.89 19.43 5.56 0.00 6.98 16.83 24.60 18.78 18.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29.10 4.80 0.00 0.00 0.00 0.00 29 E9a_E10a KnownJunction 0 3.41 42.49 104.61 29.20 4.33 38.84 6.45 95.33 109.23 69.92 2.21 0.00 0.00 0.00 0.00 0.00 0.00 120.71 84.61 105.66 2.47 2.33 4.35 30 E10_Aa NovelBoundary 0 0.00 3.16 7.39 12.69 3.31 5.51 4.37 23.66 20.49 15.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.59 8.00 2.36 0.00 0.00 0.00 31 ER10a ExonRegion 0 2.26 35.47 92.01 23.13 15.40 46.99 12.95 93.42 102.38 68.65 0.23 0.00 0.00 0.00 0.89 0.00 1.43 98.34 48.51 76.96 1.23 0.87 4.45 32 E10a_E11a KnownJunction 0 10.22 36.51 73.18 25.77 8.32 46.68 14.62 106.01 93.66 58.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 106.49 24.94 67.37 0.00 0.00 3.41 33 ER11a ExonRegion 0 1.93 24.60 80.17 32.60 16.13 51.58 13.78 90.47 102.14 72.29 0.00 0.00 0.00 0.00 0.00 0.00 1.65 106.23 54.93 68.69 1.97 2.84 3.05 34 E11a_E12a KnownJunction 0 0.00 29.21 104.73 25.47 15.79 62.75 6.27 97.14 109.20 85.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 128.51 49.70 54.84 2.47 2.39 8.71 35 ER12a ExonRegion 0 1.02 21.46 64.19 16.35 7.22 44.20 8.39 71.66 64.74 60.05 0.00 0.00 0.00 0.00 0.00 0.00 2.00 69.59 37.01 35.62 0.22 0.44 3.04 36 E12a_E13a KnownJunction 0 2.89 18.48 66.35 20.21 7.81 62.29 10.55 96.69 84.03 74.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 113.62 56.57 60.34 0.00 2.57 3.59 37 ER13a ExonRegion 0 1.47 23.06 52.24 13.61 11.96 58.31 17.85 65.60 79.38 55.47 1.16 0.00 2.32 0.00 0.00 0.00 1.86 88.04 51.19 56.50 0.36 1.03 2.14 38 E13_Da NovelBoundary 0 3.11 6.12 42.64 5.83 0.00 10.45 4.11 13.27 25.55 7.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 56.87 8.56 6.52 0.00 0.00 0.00 39 E13a_E14a KnownJunction 0 0.00 24.86 63.16 21.08 3.40 46.17 11.75 92.54 103.01 79.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 71.42 58.26 78.11 2.78 0.00 0.00 40 E14_Aa NovelBoundary 0 0.00 3.16 25.10 6.13 3.99 13.12 12.54 28.63 15.86 13.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.64 0.00 20.39 0.00 3.12 0.00 41 ER14a ExonRegion 0 2.76 20.05 39.28 9.82 8.43 35.18 9.43 56.78 82.90 49.49 1.47 0.00 0.00 0.00 0.35 0.00 4.31 60.96 64.75 55.27 0.89 1.11 0.00 42 E14_Da NovelBoundary 0 0.00 3.03 25.04 7.03 7.56 2.90 1.99 16.35 32.61 17.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42.12 32.00 11.44 0.00 2.45 0.00 43 E14a_E15a KnownJunction 0 13.56 14.14 33.26 11.59 3.14 28.90 6.23 57.83 87.07 38.95 4.95 0.00 0.00 0.00 4.45 0.00 4.49 60.52 40.94 65.77 0.00 0.00 0.00 44 E14a_E17a NovelJunction 0 0.00 5.85 17.56 2.86 3.90 9.09 0.00 20.82 11.31 37.28 2.47 0.00 0.00 0.00 0.00 0.00 0.00 7.46 7.81 7.86 0.00 0.00 0.00 45 Ix Intron 0 0.00 3.99 23.28 5.32 3.89 6.67 2.41 15.74 15.00 11.69 0.28 0.00 0.00 0.10 0.30 0.00 0.24 26.99 8.57 11.45 1.28 0.15 0.64 46 Ix_SR1 SilentIntronRegion 0 0.00 4.01 23.34 5.33 3.90 6.69 2.41 15.78 15.04 11.72 0.28 0.00 0.00 0.10 0.30 0.00 0.24 27.07 8.60 11.49 1.29 0.15 0.64 47 E15_Aa NovelBoundary 0 0.00 9.41 19.66 10.85 0.00 18.28 0.00 40.29 16.90 20.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31.59 14.12 11.76 2.78 0.00 0.00 48 ER15a ExonRegion 0 5.53 21.00 78.21 17.50 6.00 46.41 5.44 101.93 95.42 45.08 2.35 0.00 1.77 0.00 0.65 0.00 2.50 93.07 58.54 81.33 1.01 0.00 1.90 49 E15a_E16a KnownJunction 0 7.26 20.59 104.02 37.46 15.28 31.00 11.92 147.17 73.84 48.86 4.90 0.00 0.00 0.00 0.00 0.00 0.00 88.54 53.65 76.83 0.00 0.00 4.35 50 ER16a ExonRegion 0 3.13 38.50 90.95 23.62 9.52 65.68 14.28 116.48 108.62 57.31 2.67 1.78 0.00 0.00 1.96 0.00 1.65 74.98 59.05 81.91 2.14 0.00 0.86 51 E16_Da NovelBoundary 0 0.00 5.99 32.23 9.36 11.97 2.90 2.12 34.13 30.47 18.43 0.00 0.00 0.00 0.00 0.00 0.00 4.68 33.99 4.24 3.26 0.00 0.00 0.00 52 E16a_E17a KnownJunction 0 0.00 33.35 82.08 19.68 0.00 52.02 4.20 106.87 98.87 47.06 2.21 0.00 0.00 0.00 0.00 0.00 0.00 66.04 73.23 73.31 0.00 0.00 0.00 53 Ix Intron 0 0.73 4.42 33.81 8.53 4.19 12.60 3.89 18.58 27.33 12.72 0.37 0.27 0.25 0.10 0.63 0.68 1.01 36.47 8.63 14.54 0.50 0.80 1.23 54 Ix_SR1 SilentIntronRegion 0 0.73 4.43 33.86 8.54 4.19 12.62 3.90 18.61 27.37 12.74 0.37 0.27 0.25 0.10 0.63 0.68 1.01 36.52 8.65 14.56 0.51 0.80 1.23 55 E17_Aa NovelBoundary 0 11.11 12.50 42.67 12.95 8.15 10.51 3.93 22.10 50.46 16.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.98 15.81 24.35 2.29 0.00 3.84 56 ER17a ExonRegion 0 5.38 36.82 150.60 41.37 21.96 73.66 12.68 191.95 170.05 107.01 2.09 0.09 0.00 0.00 1.57 0.00 1.69 123.92 93.15 86.30 4.09 3.63 2.98 57 E17a_E18a KnownJunction 0 23.71 28.68 187.57 52.64 24.11 81.37 16.43 208.41 215.97 162.17 2.42 0.00 0.00 0.00 0.00 0.00 4.77 144.01 72.47 116.07 0.00 2.39 3.67 58 ER18a ExonRegion 0 2.88 20.19 93.63 22.71 11.67 47.83 10.72 89.71 103.71 70.76 1.41 0.49 0.00 0.48 0.29 0.00 1.79 81.06 56.92 49.10 2.07 2.82 4.77 59 E18_Da KnownBoundary 0 0.00 11.25 85.77 20.48 12.99 32.42 8.70 85.06 97.54 48.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47.96 52.14 41.61 0.00 2.69 4.10 60 E18a_E20b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 61 ER18b ExonRegion 0 0.67 8.41 65.59 13.69 4.76 25.91 4.15 57.51 63.50 51.06 0.53 0.00 0.00 0.35 0.49 0.00 0.95 54.02 34.45 33.98 1.46 0.93 2.14 62 E18_Db NovelBoundary 0 0.00 2.70 33.03 1.53 0.00 0.00 0.00 14.58 5.18 8.81 0.00 0.00 0.00 0.00 4.45 0.00 0.00 11.19 8.47 5.75 0.00 0.00 0.00 63 E18b_E19a KnownJunction 0 0.00 0.00 25.99 5.43 4.33 10.96 0.00 55.12 47.95 26.32 0.00 0.00 0.00 0.00 0.00 0.00 4.11 26.70 23.06 17.96 0.00 0.00 0.00 64 I18 Intron 0 0.00 1.17 17.44 3.10 0.00 3.50 0.76 7.38 3.52 7.18 0.00 0.00 0.00 0.00 0.39 0.00 0.00 17.19 7.30 2.44 0.00 0.00 0.00 65 I18_SR1 SilentIntronRegion 0 0.00 1.17 17.57 3.13 0.00 3.53 0.76 7.44 3.54 7.24 0.00 0.00 0.00 0.00 0.39 0.00 0.00 17.31 7.36 2.46 0.00 0.00 0.00 66 E19_Aa NovelBoundary 0 0.00 2.96 19.31 0.00 0.00 0.00 0.00 3.98 1.62 8.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.46 0.00 0.00 0.00 0.00 0.00 67 ER19a ExonRegion 0 0.03 3.62 17.76 3.71 0.78 3.87 1.35 18.41 13.30 10.71 0.13 0.00 0.00 0.00 0.25 0.00 0.69 11.11 12.47 12.80 0.27 0.25 0.35 68 E19a_E20a KnownJunction 0 2.82 13.42 48.05 13.42 0.00 13.34 2.25 41.32 44.65 24.26 2.68 0.00 0.00 0.00 0.00 0.00 0.00 19.81 24.00 11.57 0.00 0.00 0.00 69 ER20a ExonRegion 0 1.86 14.39 49.85 10.18 4.49 19.71 5.27 35.16 40.13 36.57 0.36 0.92 0.00 0.17 1.44 0.00 1.28 39.98 27.57 32.51 0.86 0.81 0.38 70 E20_Ab KnownBoundary 0 0.00 18.35 42.16 13.62 19.10 28.34 11.61 17.74 39.50 41.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 55.17 47.91 17.58 0.00 0.00 0.00 71 ER20b ExonRegion 0 1.55 35.62 65.89 18.40 28.18 55.32 11.82 79.36 71.62 59.17 0.31 1.27 0.00 0.74 0.00 0.00 1.18 37.50 48.54 32.05 0.79 2.97 1.05 72 E20_Da KnownBoundary 0 0.00 19.54 66.73 21.78 37.35 80.18 27.07 110.24 97.68 86.82 4.90 0.00 0.00 2.83 0.00 14.78 0.00 27.36 34.54 42.82 0.00 5.14 0.00 73 ER20c ExonRegion 0 0.58 5.52 7.62 2.10 2.57 10.01 2.89 12.05 9.64 8.43 0.16 0.00 0.00 0.14 0.11 0.00 0.18 2.38 5.41 2.86 0.60 0.46 0.16