Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MLST8 Gene 0 40.67 57.10 263.26 83.46 30.56 62.93 30.93 82.65 61.55 131.10 117.49 50.90 71.47 143.03 218.11 137.60 131.03 217.81 195.92 119.60 151.67 92.42 95.38 2 382450 Transcript 0 1.10 2.97 1.36 0.36 1.51 3.37 2.21 1.33 2.22 2.72 5.46 2.17 1.07 4.90 10.29 6.86 2.12 5.52 5.63 3.71 2.86 1.07 1.56 3 436727 Transcript 0 6.02 0.89 1.63 2.05 3.01 0.02 2.23 5.89 3.31 5.30 7.36 1.50 1.71 11.48 8.82 17.32 7.45 5.36 1.40 4.71 3.57 3.17 0.70 4 301724 Transcript 0 1.32 0.84 14.90 2.38 2.31 0.94 1.69 2.97 2.61 6.55 3.44 0.68 1.00 3.38 8.88 6.09 6.06 7.30 6.57 2.04 6.07 1.88 1.65 5 397124 Transcript 0 9.86 11.02 45.61 9.27 7.77 24.64 6.29 2.59 4.96 11.35 10.46 8.81 4.95 8.27 19.73 11.33 12.82 36.48 29.97 12.63 25.08 6.62 16.93 6 301725 Transcript 0 3.11 0.00 5.59 1.47 3.78 3.95 1.13 3.24 4.51 2.71 9.66 0.00 7.30 23.28 14.34 25.21 15.19 9.14 3.76 4.03 12.32 5.11 4.05 7 ER1a ExonRegion 0 1.10 2.97 1.36 0.36 1.51 3.37 2.21 1.33 2.22 2.72 5.46 2.17 1.07 4.90 10.29 6.86 2.12 5.52 5.63 3.71 2.86 1.07 1.56 8 E1a_E3a KnownJunction 1 111.72 103.27 63.01 38.09 96.94 126.40 68.58 38.81 31.11 44.19 90.02 0.00 6.98 54.98 145.25 152.87 90.60 229.44 122.26 85.52 63.82 22.72 59.50 9 E1a_E3b NovelJunction 0 78.68 41.44 17.27 28.00 28.01 40.66 27.78 20.82 9.49 14.34 30.22 0.00 0.00 30.31 47.10 112.02 51.24 48.67 18.45 38.54 41.27 20.51 110.29 10 ER1b ExonRegion 1 44.75 58.97 29.06 12.27 42.81 71.78 36.13 22.47 20.29 19.99 49.98 0.00 4.69 38.28 112.73 95.96 49.51 106.91 89.19 45.90 31.17 8.33 38.60 11 ER1c ExonRegion 1 61.97 66.43 36.01 14.61 46.53 83.03 44.94 28.62 25.32 27.65 60.35 0.24 7.30 51.07 122.66 109.97 62.53 144.54 101.40 58.04 38.20 14.82 44.05 12 ER2a ExonRegion 0 6.45 3.70 17.99 1.53 7.64 30.66 8.61 3.21 0.26 3.86 6.49 4.87 3.25 6.18 15.48 5.14 22.19 8.33 13.26 8.27 22.55 10.68 19.43 13 E2_Ab KnownBoundary 0 0.00 8.75 67.56 12.05 23.60 44.75 8.21 16.84 6.11 14.51 7.11 0.00 13.64 10.42 28.68 15.47 27.49 60.56 54.31 7.48 25.14 23.76 56.08 14 E2_Da NovelBoundary 0 6.08 9.01 3.93 2.06 0.00 12.15 0.00 6.33 4.95 6.80 11.63 5.55 0.00 9.54 39.06 40.25 8.23 12.10 49.04 10.35 18.29 14.27 49.85 15 E2a_E3a KnownJunction 0 13.26 18.35 73.24 17.01 7.89 18.63 3.97 1.97 9.66 18.83 14.42 12.75 6.66 10.36 23.98 17.52 3.46 64.63 46.68 17.00 27.61 2.57 14.43 16 E2a_E3b KnownJunction 0 0.00 0.00 3.37 1.47 0.00 2.44 0.00 2.22 6.05 2.66 1.95 0.00 0.00 0.00 10.63 16.15 0.00 6.05 0.00 3.26 5.31 2.51 8.11 17 ER2b ExonRegion 0 5.94 10.17 55.34 11.69 15.19 27.63 4.66 3.35 6.61 16.76 11.60 8.52 12.86 10.90 38.09 12.18 12.35 64.43 54.97 10.30 29.50 9.75 35.33 18 E3_Ab NovelBoundary 0 30.52 32.95 139.44 57.14 15.20 64.57 17.44 62.93 50.58 89.67 62.02 17.86 52.11 53.68 54.02 103.39 108.27 267.91 254.88 74.34 96.31 55.36 106.79 19 ER3a ExonRegion 0 67.18 57.99 110.28 42.69 37.29 88.50 33.78 49.40 39.52 63.71 80.43 25.84 34.34 62.14 90.31 127.32 89.55 243.96 202.42 86.27 79.19 39.32 71.62 20 ER3b ExonRegion 0 25.27 28.71 248.56 60.64 10.06 25.04 12.47 62.45 65.40 115.04 115.65 68.03 44.14 110.15 183.44 109.09 130.61 178.74 224.14 127.35 189.36 89.22 103.99 21 E3a_E4a KnownJunction 0 37.49 36.57 252.59 111.71 47.96 66.61 25.84 97.39 67.22 156.98 199.31 79.08 50.16 171.41 304.59 195.16 179.99 277.28 247.54 179.86 209.61 111.38 115.92 22 ER4a ExonRegion 0 50.10 53.03 355.19 119.86 34.48 104.21 34.96 98.36 106.24 183.24 178.57 85.26 119.60 188.30 287.50 248.86 192.59 400.64 254.52 185.68 244.95 125.85 143.39 23 E4a_E5a KnownJunction 0 80.98 84.52 527.36 161.52 68.08 142.13 55.42 128.03 132.38 225.64 166.73 108.19 175.64 179.12 313.37 316.16 171.67 537.11 298.83 264.55 246.74 145.61 211.62 24 E5_Aa NovelBoundary 0 3.56 9.08 69.01 14.22 10.87 25.78 13.25 45.22 22.45 42.68 23.11 6.90 0.00 9.89 41.91 46.40 25.81 90.12 70.59 22.31 48.93 19.04 14.17 25 ER5a ExonRegion 0 72.51 110.71 485.77 135.24 80.42 131.01 62.92 149.90 110.09 234.97 187.49 141.12 174.71 232.45 357.57 225.12 232.36 383.91 304.33 219.42 276.96 185.69 156.92 26 E5_Da KnownBoundary 0 3.41 0.00 0.00 1.90 4.07 0.00 0.00 4.19 1.48 1.67 2.58 0.00 0.00 2.12 19.53 8.29 4.77 6.38 0.00 9.33 2.41 3.12 4.35 27 E5a_E6a KnownJunction 0 56.23 113.53 591.46 136.75 73.60 92.73 33.96 162.65 119.99 312.24 161.78 126.49 86.20 317.09 258.73 297.79 257.97 389.16 336.57 227.35 283.81 231.22 156.13 28 ER5b ExonRegion 0 6.02 0.89 1.63 2.05 3.01 0.02 2.23 5.89 3.31 5.30 7.36 1.50 1.71 11.48 8.82 17.32 7.45 5.36 1.40 4.71 3.57 3.17 0.70 29 E5_Db NovelBoundary 0 27.86 2.70 10.11 4.89 7.56 2.33 3.27 15.85 7.78 9.80 32.11 0.00 19.97 14.24 15.33 7.26 29.83 13.27 25.13 8.56 2.29 13.10 3.67 30 ER6a ExonRegion 0 75.78 94.11 624.33 165.36 56.19 93.31 35.43 160.95 125.15 310.15 253.39 115.53 227.59 304.31 412.36 329.87 263.55 438.96 375.62 247.98 307.82 214.96 190.34 31 E6a_E7a KnownJunction 1 79.79 88.60 712.78 176.37 64.18 143.38 44.91 179.29 130.96 304.18 242.01 57.77 183.27 335.34 388.90 246.00 237.59 440.15 349.47 242.12 227.96 186.58 198.04 32 ER7a ExonRegion 0 87.37 106.01 699.57 191.83 76.15 130.97 66.97 199.78 139.21 328.42 299.30 129.86 203.57 326.44 465.76 366.54 311.69 595.47 530.37 271.09 357.42 260.77 262.86 33 E7a_E8a KnownJunction 0 57.34 106.82 656.95 168.88 70.63 184.10 69.87 143.27 98.00 250.86 228.69 111.19 147.07 195.95 304.10 247.03 137.91 314.01 329.14 229.21 254.46 170.60 179.86 34 E7a_E9a KnownJunction 0 6.22 0.00 7.81 1.47 7.56 5.45 2.25 4.27 2.98 2.77 17.37 0.00 14.61 46.56 18.05 34.26 30.39 12.23 7.53 4.79 19.34 7.72 0.00 35 Ix Intron 0 7.57 8.12 27.63 20.94 5.42 10.05 9.07 17.49 13.05 21.08 10.94 2.64 3.45 6.40 11.71 5.84 7.08 31.68 21.45 12.81 4.46 4.84 3.15 36 Ix_AR1 ActiveIntronRegion 0 8.28 8.16 28.77 24.97 4.58 8.38 8.93 23.55 12.61 23.28 8.63 0.02 3.03 7.88 12.77 7.28 9.75 46.41 24.28 13.33 4.91 5.61 6.75 37 Ix_SR1 SilentIntronRegion 0 4.51 14.56 30.25 22.99 8.80 13.32 7.42 22.83 30.85 21.67 4.73 6.15 4.69 8.85 6.95 6.96 10.77 36.32 19.70 9.97 3.60 4.11 2.94 38 Ix_AR2 ActiveIntronRegion 0 7.55 7.73 27.19 19.55 5.50 10.43 9.25 15.24 12.14 20.39 12.11 3.29 3.52 5.79 11.69 5.33 6.00 26.68 20.70 12.85 4.39 4.65 2.00 39 ER8a ExonRegion 0 102.81 123.22 562.69 183.48 60.81 148.92 65.93 178.75 123.54 263.10 256.09 90.43 201.00 278.27 385.52 296.02 241.63 536.01 485.47 238.55 315.11 186.40 221.38 40 E8a_E9a KnownJunction 0 107.95 128.99 486.35 151.10 36.76 108.46 53.66 113.69 115.10 226.55 180.10 51.92 77.92 215.67 375.06 243.53 166.99 400.81 337.04 208.18 188.36 115.18 161.51 41 ER9a ExonRegion 0 70.55 100.50 417.88 148.74 41.29 109.78 58.82 118.69 92.72 199.06 174.84 72.84 102.47 243.77 296.74 192.35 222.81 332.35 289.93 178.84 226.96 114.48 143.25 42 E9_Da KnownBoundary 0 0.00 0.00 13.01 0.00 0.00 2.56 2.21 8.13 0.00 9.29 2.63 6.00 6.33 4.94 4.45 4.02 4.11 6.26 18.54 0.00 0.00 0.00 0.00 43 E9a_E9b KnownJunction 0 88.24 171.15 406.34 197.61 61.04 157.81 73.97 138.83 109.40 237.38 159.20 76.98 75.64 251.63 457.14 138.85 234.69 396.25 345.42 209.33 246.80 104.34 125.91 44 ER9b ExonRegion 0 1.32 0.84 14.90 2.38 2.31 0.94 1.69 2.97 2.61 6.55 3.44 0.68 1.00 3.38 8.88 6.09 6.06 7.30 6.57 2.04 6.07 1.88 1.65 45 E9_Ab KnownBoundary 0 3.04 0.00 13.75 1.53 7.89 2.38 4.15 4.11 0.00 2.47 4.21 0.00 0.00 2.47 4.45 7.26 0.00 0.00 3.86 0.00 5.99 2.51 3.76 46 ER9c ExonRegion 0 36.76 65.88 232.72 88.99 26.46 57.13 31.47 89.07 61.39 128.96 112.03 33.79 39.53 156.68 271.17 124.04 127.14 177.03 169.66 118.80 138.88 84.32 80.18 47 ER9d ExonRegion 0 2.12 4.07 8.58 2.73 0.00 3.67 0.00 0.00 1.24 1.15 0.00 0.00 0.00 1.62 2.90 2.97 3.30 0.00 0.00 0.00 2.20 2.08 2.94