Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ADCY9 Gene 0 12.11 30.64 51.60 22.32 20.03 82.05 35.15 37.32 36.13 62.88 12.73 2.55 19.39 15.45 16.28 0.59 1.90 74.12 17.87 69.07 59.42 44.85 49.65 2 294016 Transcript 0 8.68 17.74 30.83 14.44 17.21 54.55 31.69 27.04 34.40 57.81 14.98 2.69 16.13 19.53 14.13 0.79 1.98 83.59 25.85 72.18 69.26 47.32 51.35 3 ER1a ExonRegion 0 0.00 0.64 3.14 0.42 0.28 3.05 2.07 2.69 3.56 7.80 3.06 0.37 2.00 3.42 2.11 0.00 0.00 14.31 4.03 12.20 10.90 4.29 9.22 4 E1a_E2a KnownJunction 0 0.00 0.00 11.12 3.36 0.00 4.94 1.85 10.56 22.66 29.68 2.58 0.00 0.00 16.48 8.90 0.00 0.00 22.63 9.13 29.72 7.85 5.20 7.26 5 ER2a ExonRegion 0 5.57 16.46 27.77 11.94 13.12 35.18 30.57 22.38 27.48 53.24 14.10 1.83 21.54 18.84 16.27 0.87 1.85 78.02 17.39 78.97 57.16 31.26 44.67 6 E2_Da NovelBoundary 0 7.04 12.23 21.44 9.06 12.14 5.79 26.72 10.06 9.78 11.26 0.00 0.00 0.00 7.24 0.00 0.00 0.00 47.09 8.38 22.37 3.15 0.00 26.04 7 E2a_E3a KnownJunction 0 3.78 9.80 37.70 15.88 22.58 30.83 27.29 25.38 29.17 75.08 7.63 0.00 6.82 14.60 24.85 0.00 0.00 89.29 53.08 87.76 61.84 72.38 56.17 8 I2_SR1 SilentIntronRegion 0 2.35 12.29 6.85 5.89 8.00 6.91 18.39 6.21 5.23 5.98 2.31 0.75 5.89 1.31 2.42 0.13 1.54 9.14 1.87 17.78 4.31 1.49 9.30 9 I2_AR2 ActiveIntronRegion 0 3.74 12.72 7.88 8.04 6.82 8.98 23.12 7.64 4.61 10.59 2.12 1.91 2.10 0.54 5.78 0.00 1.20 11.95 2.56 24.05 2.31 2.00 5.90 10 I2_SR2 SilentIntronRegion 0 5.99 15.53 12.44 7.43 7.16 7.86 20.43 7.72 5.82 9.73 0.60 1.41 9.95 0.50 1.19 0.00 0.43 5.51 2.05 11.13 0.72 1.37 2.99 11 I2_AR3 ActiveIntronRegion 0 4.27 17.59 19.08 9.16 9.77 10.10 22.18 10.89 7.10 9.33 0.70 1.29 10.22 0.32 3.26 0.36 0.40 10.90 2.35 21.23 4.68 1.26 7.88 12 I2_SR3 SilentIntronRegion 0 4.89 6.27 13.58 7.21 4.93 6.43 11.43 5.93 4.38 7.59 0.27 0.46 4.73 0.37 3.53 0.21 0.46 8.51 1.11 10.77 3.38 0.55 7.83 13 I2_AR4 ActiveIntronRegion 0 12.70 15.59 35.13 17.04 8.03 9.47 13.24 17.86 12.35 12.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.32 1.06 14.89 5.51 3.47 3.92 14 I2_AR5 ActiveIntronRegion 0 8.47 20.67 32.06 13.86 11.59 12.23 9.49 18.44 13.38 16.44 0.00 0.00 4.69 0.00 0.00 0.00 0.00 12.93 6.37 24.47 4.77 1.04 8.81 15 I2_AR6 ActiveIntronRegion 0 1.95 20.74 37.55 13.68 9.42 17.24 7.47 16.25 9.93 14.77 0.00 0.00 4.69 0.00 0.00 0.00 0.00 16.48 8.79 20.34 6.88 2.08 5.87 16 I2_AR7 ActiveIntronRegion 0 4.76 18.05 43.65 18.23 7.36 16.05 10.59 21.82 9.11 14.05 0.00 0.00 1.76 0.00 0.00 0.00 0.00 30.26 7.17 21.28 5.51 2.08 8.08 17 I2_AR8 ActiveIntronRegion 0 7.89 11.92 24.55 14.56 8.07 12.10 17.70 18.34 5.38 13.06 0.00 0.74 4.65 0.70 4.72 0.00 0.00 20.03 2.42 13.41 4.69 1.13 13.92 18 I2_SR4 SilentIntronRegion 0 4.43 7.53 12.85 10.57 6.27 8.79 17.07 10.89 6.13 7.64 0.20 1.12 4.80 0.44 4.11 0.00 0.00 14.92 3.05 17.85 4.72 0.00 9.68 19 I2_AR9 ActiveIntronRegion 0 3.28 11.62 15.28 12.41 6.84 7.77 18.44 11.48 7.96 8.76 0.96 2.06 2.97 0.36 3.85 0.41 1.25 17.46 0.70 14.78 2.28 1.13 8.25 20 I2_AR10 ActiveIntronRegion 0 0.63 5.21 5.63 3.50 2.85 2.19 7.01 3.18 2.44 4.44 0.29 0.00 2.88 0.00 3.10 0.00 0.00 16.55 2.65 11.75 0.33 0.00 5.08 21 I2_SR6 SilentIntronRegion 0 1.77 8.28 5.26 5.43 8.18 5.10 20.32 3.62 2.62 4.12 0.36 0.99 5.67 0.17 1.47 0.28 0.31 4.91 1.58 10.96 1.16 0.19 5.23 22 I2_AR11 ActiveIntronRegion 0 2.77 7.15 4.40 6.44 5.72 4.93 18.07 4.44 3.17 3.89 0.53 0.74 7.59 0.25 1.74 0.00 0.68 9.62 1.32 18.04 1.82 0.29 5.87 23 I2_AR12 ActiveIntronRegion 0 3.51 8.75 6.24 2.84 4.43 2.25 12.43 2.77 4.52 5.80 0.00 0.00 6.62 0.00 2.31 0.00 0.65 18.12 0.63 12.68 4.27 0.46 5.89 24 I2_AR15 ActiveIntronRegion 0 2.85 3.43 6.45 2.06 8.11 5.88 16.96 1.30 0.93 2.29 0.00 0.00 10.34 0.68 1.10 0.50 0.00 6.21 3.22 5.03 3.62 0.00 9.42 25 I2_AR16 ActiveIntronRegion 0 4.90 13.44 9.98 1.93 3.65 9.17 9.62 7.63 2.47 5.09 0.00 0.00 2.06 0.00 5.59 0.00 0.00 10.82 0.00 18.84 7.04 0.00 4.94 26 ER3a ExonRegion 0 6.66 18.56 34.45 16.57 16.81 45.26 33.33 29.82 27.48 66.15 16.24 2.31 14.81 17.04 14.84 0.79 3.15 96.67 32.47 82.33 72.26 51.99 49.89 27 E3a_E4a KnownJunction 0 6.67 24.27 36.81 16.58 35.57 65.93 75.83 32.28 28.30 79.99 9.37 6.30 6.82 19.19 8.90 0.00 4.77 81.91 45.74 85.27 81.36 79.17 58.05 28 E4_Aa NovelBoundary 0 3.56 0.00 3.13 5.13 3.99 8.01 16.34 0.00 9.23 1.02 0.00 0.00 0.00 2.12 0.00 0.00 0.00 8.37 0.00 5.43 5.75 0.00 0.00 29 ER4a ExonRegion 0 4.84 23.49 29.99 21.18 17.74 62.51 43.06 21.04 25.17 55.98 9.94 7.46 11.61 22.13 13.65 1.42 2.23 85.98 22.60 73.39 72.09 39.03 32.83 30 E4_Da NovelBoundary 0 3.78 6.05 16.74 4.86 0.00 12.95 13.82 14.05 9.75 15.93 4.53 0.00 0.00 7.24 4.45 0.00 0.00 36.89 4.80 39.56 17.24 8.45 15.02 31 E4a_E5a KnownJunction 0 9.41 6.18 25.93 12.99 23.77 18.23 29.68 25.79 17.33 55.42 7.21 0.00 7.30 13.60 6.30 0.00 0.00 87.05 17.98 41.29 32.99 48.68 41.49 32 E4a_E6a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.05 1.50 1.64 0.00 0.00 6.82 0.00 0.00 0.00 0.00 0.00 4.80 0.00 3.03 11.88 0.00 33 I4_AR1 ActiveIntronRegion 0 2.12 5.92 2.45 1.00 1.86 3.21 2.81 2.04 2.03 0.86 0.28 0.00 3.52 1.94 0.00 0.00 0.00 5.48 0.00 20.21 7.63 8.41 8.18 34 E5_Aa NovelBoundary 0 3.78 3.22 3.67 0.00 3.40 2.84 4.06 12.24 4.66 11.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.72 4.80 6.52 8.28 2.57 28.08 35 ER5a ExonRegion 0 7.16 16.50 23.18 13.08 14.39 46.06 31.40 34.17 44.97 72.00 16.76 6.38 18.01 23.55 13.72 0.71 0.77 96.34 31.05 61.32 79.90 57.06 70.74 36 E5a_E6a KnownJunction 0 40.90 51.57 40.48 31.63 50.08 161.50 109.21 62.88 85.13 115.61 55.49 13.95 41.39 38.44 21.51 0.00 0.00 186.46 102.97 135.44 131.71 166.80 214.77 37 E6_Aa NovelBoundary 0 46.53 54.20 9.11 9.96 4.33 24.82 25.31 8.67 5.38 16.36 0.00 0.00 0.00 0.00 0.00 4.36 0.00 9.53 9.60 19.37 5.37 3.12 3.59 38 ER6a ExonRegion 0 17.38 26.14 38.22 17.98 20.08 56.19 40.08 40.71 61.40 85.34 31.64 4.25 22.63 24.39 27.38 0.92 1.12 122.47 34.79 72.79 98.23 64.53 87.07 39 E6_Da NovelBoundary 0 9.41 10.06 9.40 11.92 4.33 2.33 13.29 6.04 4.17 12.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.72 7.53 26.27 8.09 0.00 0.00 40 E6a_E7a KnownJunction 0 9.63 17.63 40.95 9.06 16.64 59.40 26.32 33.76 53.65 79.67 14.11 0.00 40.09 7.06 17.80 4.02 9.16 88.71 26.17 67.11 84.63 39.01 41.83 41 E7_Aa NovelBoundary 0 3.33 16.05 14.16 4.93 4.33 8.35 10.02 15.57 5.61 11.44 2.63 0.00 13.64 0.00 0.00 0.00 0.00 18.90 4.05 17.96 11.74 2.88 4.27 42 ER7a ExonRegion 0 9.34 14.71 32.30 14.37 12.16 41.28 22.79 31.85 32.24 58.75 11.39 1.37 21.63 20.44 17.00 0.27 3.13 87.14 9.11 72.12 78.30 47.60 43.85 43 E7_Da NovelBoundary 0 0.00 3.22 15.58 5.36 0.00 0.00 5.74 1.68 1.71 6.26 0.00 0.00 0.00 0.00 4.33 0.00 0.00 12.85 0.00 5.69 5.56 2.57 0.00 44 E7a_E8a KnownJunction 0 0.00 19.34 23.00 3.36 15.70 50.94 21.60 26.29 18.29 49.13 8.05 0.00 26.78 24.37 8.90 0.00 4.68 49.37 4.05 79.13 91.86 43.97 37.13 45 I7_SR1 SilentIntronRegion 0 2.33 4.21 6.25 2.72 2.44 3.25 6.79 4.91 3.30 4.75 1.25 0.00 0.77 1.29 2.17 0.00 0.33 16.67 0.32 5.70 4.98 1.99 5.53 46 I7_AR2 ActiveIntronRegion 0 1.48 4.88 4.78 2.45 8.03 0.00 2.98 2.16 6.30 7.68 1.93 0.00 0.00 2.19 0.00 0.00 0.00 32.80 0.00 14.36 7.05 3.13 1.32 47 I7_SR2 SilentIntronRegion 0 2.12 4.07 5.11 0.45 8.03 0.00 2.65 1.73 5.66 3.92 1.29 0.00 0.00 1.62 1.21 0.00 0.00 21.71 0.00 15.60 5.33 2.08 3.92 48 ER8a ExonRegion 0 6.01 19.47 27.13 10.17 9.87 48.55 27.05 23.23 33.54 43.48 8.19 1.14 15.21 18.92 15.72 0.95 1.51 76.08 12.72 73.52 65.66 28.00 42.58 49 E8a_E9a KnownJunction 0 0.00 19.08 32.61 13.65 20.29 37.14 23.80 20.87 36.34 53.59 17.95 0.00 13.64 24.37 8.90 0.00 0.00 70.14 9.22 89.74 81.73 30.43 26.89 50 ER9a ExonRegion 0 4.15 11.25 24.53 8.20 12.57 33.03 15.31 17.11 31.66 43.41 13.93 0.93 11.77 19.49 14.19 0.66 0.00 80.78 15.99 66.46 58.72 24.53 30.19 51 E9a_E10a KnownJunction 0 10.15 16.25 35.24 16.98 8.49 73.65 25.13 24.93 42.39 48.70 24.95 6.15 5.84 29.43 13.72 4.19 0.00 117.81 42.92 85.20 88.59 32.58 37.82 52 I9_AR1 ActiveIntronRegion 0 0.00 16.51 0.86 1.36 2.68 4.21 11.99 1.63 0.00 0.00 0.00 0.00 0.55 0.19 0.00 0.00 0.00 5.54 0.00 8.51 2.98 3.19 2.94 53 E10_Aa NovelBoundary 0 0.00 26.84 1.71 5.26 8.32 32.03 12.85 2.55 7.67 5.29 7.32 0.00 0.00 2.47 5.07 0.00 0.00 19.44 0.00 17.64 2.84 0.00 4.18 54 ER10a ExonRegion 0 8.92 8.33 29.20 17.62 9.30 65.14 20.43 18.68 33.82 39.02 16.43 1.03 15.97 21.00 10.64 1.27 2.20 86.32 19.49 71.63 70.52 36.81 38.67 55 E10a_E11a KnownJunction 0 14.37 9.54 20.90 17.05 15.20 87.11 16.25 13.68 24.36 28.07 12.79 0.00 13.64 19.25 13.35 0.00 4.77 63.05 13.46 79.39 66.29 35.39 51.22 56 E11_Aa NovelBoundary 0 7.19 21.05 15.94 7.26 0.00 9.82 4.28 8.17 4.20 13.30 2.16 0.00 0.00 2.47 0.00 0.00 4.11 24.25 0.00 15.40 0.00 2.69 7.26 57 ER11a ExonRegion 0 17.35 43.42 72.82 31.25 26.68 119.64 42.49 49.80 43.41 73.95 12.71 2.93 21.25 14.05 18.02 0.49 2.16 74.81 18.48 70.99 61.84 55.00 56.06