Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NMRAL1 Gene 0 80.76 17.57 187.38 35.94 49.91 48.86 47.31 68.89 58.47 89.56 139.91 46.72 49.17 154.28 235.70 168.34 140.38 65.09 93.58 40.19 93.54 41.21 59.99 2 283429 Transcript 0 8.12 3.67 17.36 0.46 9.68 7.44 8.96 3.94 5.13 6.18 8.97 1.11 0.51 6.51 18.17 20.21 17.20 5.80 2.31 8.00 3.20 1.42 7.23 3 404295 Transcript 1 10.25 7.14 27.88 2.88 12.70 17.36 20.19 24.30 15.77 24.02 48.80 0.59 0.75 25.70 34.18 41.76 32.54 26.52 35.04 3.78 23.26 2.31 12.47 4 ER1a ExonRegion 0 4.82 0.10 2.59 1.38 3.83 1.80 0.95 2.90 4.41 0.85 4.00 3.34 1.53 2.88 4.41 6.45 2.57 0.64 2.41 1.75 1.95 1.14 1.08 5 E1_Ab KnownBoundary 0 22.60 2.83 5.59 5.36 11.29 2.38 13.51 2.51 10.76 3.71 6.95 0.00 0.00 9.01 24.60 18.54 17.20 5.72 3.67 8.37 21.31 5.45 15.54 6 ER1b ExonRegion 1 52.19 8.25 29.71 6.09 18.46 32.43 31.13 7.63 10.73 12.98 40.07 2.60 5.29 53.48 89.61 67.09 66.40 20.25 21.25 13.34 37.40 10.75 49.55 7 E1_Da KnownBoundary 0 40.16 6.18 43.40 8.52 23.26 79.67 45.44 18.69 10.04 20.68 54.43 0.00 0.00 86.88 46.36 78.10 36.65 33.49 49.60 15.21 23.85 3.12 31.24 8 E1a_E2a KnownJunction 0 17.41 8.88 44.59 0.00 19.86 16.87 21.95 8.91 8.51 16.55 19.06 0.00 0.00 15.01 35.60 54.17 45.72 14.92 4.52 20.13 5.44 3.12 17.67 9 ER1c ExonRegion 1 20.50 11.19 43.05 5.76 25.41 29.55 38.66 24.53 18.09 33.44 61.42 1.19 1.50 44.22 63.92 80.02 42.26 36.57 60.67 7.57 32.32 4.63 17.26 10 E1b_E2a KnownJunction 0 0.00 3.09 12.71 0.00 0.00 5.17 1.72 24.07 13.45 14.59 36.17 0.00 0.00 7.18 4.45 3.50 22.81 16.46 9.41 0.00 14.21 0.00 7.68 11 E2_Aa NovelBoundary 0 28.00 2.70 26.91 8.02 0.00 19.65 4.20 27.56 7.81 24.50 7.21 5.25 12.66 32.14 32.63 49.73 35.90 10.16 13.37 0.00 36.63 19.90 32.35 12 ER2a ExonRegion 0 50.77 7.01 116.16 10.87 19.42 19.13 27.91 55.75 40.04 65.68 113.62 16.32 17.24 137.06 158.94 139.81 98.54 39.18 66.38 35.02 62.45 23.96 40.24 13 E2a_E3a KnownJunction 0 97.13 0.00 169.12 14.75 24.96 12.78 9.76 81.70 65.42 93.21 108.40 18.61 47.40 124.79 245.13 214.22 165.97 61.81 123.58 31.77 76.30 11.76 27.91 14 I2_SR2 SilentIntronRegion 0 7.86 1.37 9.87 5.50 6.33 6.19 1.34 14.79 8.70 8.66 6.53 10.84 8.11 9.36 11.07 21.08 6.69 2.80 9.68 7.90 0.74 11.96 9.92 15 E3_Aa NovelBoundary 0 10.30 7.96 9.88 9.49 4.07 5.79 6.05 12.36 9.26 8.81 10.27 25.81 6.49 9.89 20.64 36.66 9.54 8.79 33.60 6.20 20.14 16.10 13.06 16 ER3a ExonRegion 0 69.73 19.60 212.48 36.60 56.86 53.59 70.74 80.85 77.43 132.41 194.53 62.90 58.81 216.92 324.13 233.37 180.17 107.67 103.70 57.52 132.26 56.05 74.72 17 E3_Da NovelBoundary 0 19.19 0.00 5.82 0.00 11.21 2.44 10.16 2.55 9.46 17.78 2.58 0.00 0.00 14.83 13.60 12.22 4.68 13.56 16.09 8.76 3.09 2.27 25.01 18 E3a_E4a KnownJunction 0 146.69 30.65 294.64 47.25 33.79 51.62 105.37 84.94 78.88 145.97 228.85 72.62 41.07 208.19 337.97 224.56 151.66 123.74 171.30 53.24 137.52 75.87 57.02 19 E4_Aa NovelBoundary 1 0.00 3.03 21.76 2.06 0.00 5.68 6.09 20.25 10.65 15.66 2.47 24.16 0.00 2.65 21.01 15.64 0.00 10.03 0.00 12.66 14.76 0.00 7.77 20 ER4a ExonRegion 0 170.76 33.95 327.66 67.47 92.11 89.62 76.33 112.91 97.42 166.01 223.74 80.34 75.98 272.54 407.16 257.50 240.49 103.15 152.34 65.31 155.19 86.06 98.52 21 E4a_E5a KnownJunction 0 139.51 18.02 324.18 70.65 145.76 76.32 72.43 120.92 113.05 152.79 273.17 94.23 107.30 231.27 443.91 221.05 241.98 80.05 158.22 62.64 138.38 60.93 72.99 22 E4a_E6a NovelJunction 0 0.00 0.00 10.85 2.06 0.00 4.94 2.25 2.26 1.07 5.78 7.42 0.00 0.00 7.30 4.45 15.64 4.02 0.00 0.00 2.75 2.78 2.69 0.00 23 I4_AR2 ActiveIntronRegion 0 10.44 2.51 16.88 6.57 10.31 3.11 9.18 11.51 4.82 12.38 10.42 5.10 2.51 11.85 21.85 21.98 11.19 16.70 12.76 11.47 7.13 6.74 9.50 24 I4_AR4 ActiveIntronRegion 0 21.37 7.13 24.73 7.28 20.34 7.68 23.32 9.81 4.07 13.15 7.03 7.80 6.97 12.26 16.89 31.89 16.60 14.46 21.66 9.50 11.16 9.19 6.26 25 I4_SR4 SilentIntronRegion 0 37.86 9.49 39.76 10.30 16.05 9.78 34.57 13.64 10.29 11.72 19.97 0.00 4.69 19.31 24.50 42.60 29.71 17.66 28.67 10.64 22.28 15.51 5.87 26 ER5a ExonRegion 0 85.35 21.89 366.48 74.31 65.32 73.97 61.83 134.33 114.48 144.99 243.71 89.76 106.52 263.12 405.99 285.29 268.69 102.52 163.45 75.73 176.86 70.14 109.15 27 E5_Da NovelBoundary 0 10.00 3.16 37.73 10.26 28.18 0.00 14.57 2.26 6.13 25.92 16.79 12.60 0.00 48.97 50.93 36.83 4.39 21.97 34.64 9.59 8.46 13.84 20.40 28 E5a_E6a KnownJunction 0 64.01 3.03 322.52 41.15 74.36 22.32 60.68 92.66 92.56 117.79 141.14 102.63 121.75 171.70 251.81 152.52 179.06 72.83 67.20 67.11 133.44 33.56 51.05 29 I5 Intron 0 5.26 2.59 21.08 3.82 12.03 16.61 12.79 9.33 6.79 15.83 7.78 7.59 3.68 26.63 28.75 21.74 19.05 11.53 17.96 7.71 10.06 6.15 6.90 30 I5_AR2 ActiveIntronRegion 0 1.48 8.23 21.66 2.73 12.07 10.11 8.62 7.76 4.11 8.05 2.61 2.52 0.00 38.30 31.04 8.64 11.05 11.82 14.96 6.68 13.84 7.22 10.18 31 I5_AR3 ActiveIntronRegion 0 4.23 9.28 35.92 2.73 13.21 12.61 13.98 13.61 6.41 16.85 5.56 9.74 0.59 25.78 30.64 16.53 8.87 13.97 13.74 10.90 11.84 5.34 12.30 32 I5_AR4 ActiveIntronRegion 0 4.76 8.13 41.25 1.02 9.14 11.00 15.56 11.96 6.79 23.99 7.73 12.99 4.69 32.75 35.06 22.79 7.43 12.78 9.29 9.75 6.43 3.99 11.26 33 I5_SR1 SilentIntronRegion 0 12.62 3.25 36.92 5.70 14.45 27.64 13.29 8.39 10.08 33.09 12.12 8.74 2.30 27.73 32.23 25.61 22.51 13.30 42.22 10.02 4.69 9.70 9.56 34 I5_AR6 ActiveIntronRegion 0 3.87 0.93 21.68 4.02 11.40 17.87 12.30 10.59 8.13 17.17 8.83 10.47 6.59 23.66 34.56 25.34 25.63 12.31 17.94 8.42 12.41 7.30 7.15 35 E6_Aa NovelBoundary 0 13.19 11.71 27.29 0.00 7.39 10.28 18.55 17.66 9.11 31.40 14.06 18.31 0.00 36.02 29.67 34.01 36.56 31.42 12.89 5.69 26.26 15.12 4.10 36 ER6a ExonRegion 0 126.43 23.75 226.57 43.33 69.12 58.72 50.04 79.21 57.68 84.86 149.29 56.76 66.99 149.60 254.61 186.45 139.30 63.40 115.54 39.52 88.54 36.91 64.98 37 ER6b ExonRegion 0 2.12 2.03 4.90 0.00 5.35 3.67 3.97 0.00 2.47 1.15 3.87 0.00 0.00 1.62 14.51 0.00 3.30 1.85 0.00 2.13 2.20 0.00 2.94 38 IG15 Intergenic 0 7.60 2.70 15.33 3.76 15.49 9.23 9.75 9.84 8.42 12.36 1.42 4.56 3.50 3.10 5.78 7.55 6.42 7.96 10.50 4.77 4.94 2.43 7.39 39 IG15_SR1 SilentIntergenicRegion 0 7.63 2.66 15.11 3.55 15.49 10.01 9.72 9.99 8.39 11.71 1.58 5.05 3.75 3.07 6.15 8.44 6.58 7.90 11.05 5.05 5.41 2.28 7.86 40 IG15_AR1 ActiveIntergenicRegion 0 7.80 3.00 17.22 5.09 16.17 5.41 10.34 9.49 8.95 16.38 0.57 2.10 2.28 3.32 4.05 3.07 5.84 8.66 7.98 3.44 2.60 3.38 5.19