Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TXNDC11 Gene 0 143.58 41.74 49.41 30.72 55.45 35.46 34.14 44.22 46.87 36.45 241.18 352.74 434.09 290.46 650.82 312.75 293.91 40.58 28.24 27.55 65.50 91.59 64.12 2 436567 Transcript 0 7.12 3.67 3.60 2.83 3.74 4.74 6.99 2.94 1.73 1.53 4.38 9.47 13.22 7.10 21.23 10.69 8.63 2.44 5.29 4.29 3.24 3.56 4.57 3 396522 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.06 3.21 3.55 1.32 2.13 0.09 0.00 0.00 0.00 0.00 0.00 0.00 0.06 4 283033 Transcript 0 80.16 9.08 17.44 18.38 92.87 30.72 36.30 45.67 41.20 20.66 343.72 817.62 1198.95 364.65 517.46 322.74 356.15 15.84 24.57 18.02 55.60 138.33 76.49 5 356957 Transcript 0 5.27 0.46 0.89 0.00 4.89 1.79 1.71 1.01 0.79 1.06 7.61 11.03 21.06 5.11 11.49 10.00 7.21 0.08 0.17 0.45 0.11 0.94 0.00 6 ER1a ExonRegion 0 1.86 0.00 0.00 0.00 0.00 7.01 5.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.22 4.28 0.64 0.00 2.18 0.00 0.00 0.00 0.00 7 E1_Ab KnownBoundary 0 0.00 0.00 4.79 0.00 0.00 24.53 13.73 2.34 2.46 1.26 7.37 0.00 0.00 9.65 14.22 48.79 11.03 36.93 4.14 2.68 2.72 0.00 18.87 8 ER1b ExonRegion 0 9.04 4.80 2.05 1.54 1.40 7.64 6.07 5.05 5.40 4.72 24.09 9.26 13.46 51.84 80.23 41.11 42.26 7.86 1.64 4.38 15.92 7.80 7.09 9 E1a_E2a KnownJunction 0 18.00 32.76 16.06 10.45 29.20 65.36 41.07 29.86 29.17 32.50 167.04 83.58 100.16 202.19 346.75 210.88 218.79 53.18 0.00 21.41 68.51 21.49 38.16 10 ER2a ExonRegion 0 51.83 27.92 34.98 19.07 33.18 31.80 33.98 38.19 47.62 46.43 260.42 306.18 389.23 363.57 560.54 303.14 363.21 51.75 23.62 35.50 73.06 67.87 61.97 11 E2a_E3a KnownJunction 0 60.01 26.71 56.74 41.92 27.67 16.64 29.63 53.89 80.58 70.32 347.40 613.40 794.59 488.26 785.96 495.60 420.48 48.91 69.65 35.92 61.59 143.96 79.22 12 E3_Aa NovelBoundary 0 3.48 0.00 12.18 1.37 0.00 0.00 20.89 0.00 2.52 4.51 0.00 18.91 14.93 0.00 14.34 12.73 16.36 0.00 4.52 2.75 0.00 0.00 0.00 13 ER3a ExonRegion 0 74.57 33.64 47.61 35.45 75.85 40.32 55.15 50.02 72.15 52.91 456.56 747.32 1002.18 518.92 791.09 456.95 530.77 45.19 30.94 36.52 80.55 149.97 90.74 14 E3_Da NovelBoundary 0 0.00 2.70 24.93 6.09 0.00 0.00 0.00 3.98 8.01 1.16 0.00 24.46 19.48 2.47 13.35 11.45 18.51 1.62 0.00 5.69 4.94 0.00 0.00 15 E3a_E4a KnownJunction 1 89.05 37.43 35.10 39.89 123.01 73.76 97.47 58.08 65.83 43.70 379.89 953.11 1302.84 649.13 1307.13 591.13 486.86 37.52 51.01 47.75 55.23 205.87 114.39 16 E3a_E12a NovelJunction 0 27.63 24.86 12.83 17.21 24.45 48.21 12.23 26.45 30.82 21.44 72.18 51.62 38.31 78.87 69.47 74.42 47.31 36.69 27.58 30.30 13.90 25.60 15.62 17 E4_Aa NovelBoundary 0 52.60 5.72 3.25 2.90 8.40 5.51 39.97 1.97 1.27 1.10 0.00 17.86 94.15 2.47 28.43 17.43 0.00 4.23 8.38 6.20 2.78 0.00 3.93 18 ER4a ExonRegion 0 83.18 32.11 49.07 35.10 77.97 32.02 57.64 53.69 55.47 40.57 380.19 790.66 1059.62 479.68 741.85 479.22 495.95 26.48 36.36 19.00 59.06 165.88 101.52 19 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 E4a_E12a KnownJunction 1 92.02 25.13 38.70 45.02 33.96 39.47 45.93 56.27 68.43 40.37 345.61 973.82 1236.61 490.50 808.58 434.07 428.52 22.51 30.21 20.45 80.06 222.34 68.89 21 I4 Intron 0 32.29 2.13 2.29 3.40 3.91 0.77 9.96 5.92 6.92 1.07 2.83 43.17 63.08 3.59 25.92 13.05 20.70 0.96 1.33 4.00 3.22 0.87 1.84 22 I4_SR1 SilentIntronRegion 0 32.56 2.14 2.31 3.42 3.95 0.77 10.04 5.97 6.98 1.08 2.85 43.53 63.59 3.62 26.11 13.15 20.87 0.97 1.34 4.04 3.24 0.88 1.86 23 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.13 0.00 0.00 0.00 0.77 0.00 0.00 0.00 0.58 1.04 0.00 0.00 0.00 0.00 0.00 0.00 0.73 25 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 ER6a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER7a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 ER8a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 ER9a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 ER10a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.20 21.67 9.13 11.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 ER11a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.32 20.97 6.59 13.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 ER12a ExonRegion 1 98.08 50.97 41.10 41.55 60.60 45.69 43.82 52.52 56.15 46.07 379.63 1058.09 1411.00 530.60 812.60 530.97 487.83 37.82 45.24 29.99 70.94 187.43 133.12 35 E12a_E13a KnownJunction 0 3.04 0.00 2.66 1.37 0.00 0.00 0.00 2.55 0.00 0.00 4.74 0.00 5.68 7.18 9.15 0.00 0.00 0.00 0.00 0.00 3.15 3.12 0.00 36 E12a_E15a KnownJunction 0 3.78 0.00 0.00 0.00 3.99 5.22 0.00 0.00 0.00 0.00 0.00 6.30 13.64 7.06 6.30 7.52 4.30 0.00 0.00 0.00 0.00 0.00 0.00 37 E12a_E16a KnownJunction 1 80.16 9.08 17.44 18.38 92.87 30.72 36.30 45.67 41.20 20.66 343.72 817.62 1198.95 364.65 517.46 322.74 356.15 15.84 24.57 18.02 55.60 138.33 76.49 38 E12a_E17a NovelJunction 0 16.67 45.91 24.27 12.59 54.75 25.04 29.72 25.30 9.29 17.59 62.54 42.91 99.51 50.27 37.83 50.76 62.27 37.97 4.33 23.71 16.31 33.56 18.18 39 ER13a ExonRegion 0 5.34 3.24 0.83 0.92 0.68 0.84 4.93 0.88 1.68 1.17 5.19 20.22 36.24 10.83 36.10 14.25 11.27 1.25 6.50 3.84 1.76 5.48 9.35 40 E13_Da NovelBoundary 0 12.59 0.00 56.65 67.52 7.56 9.71 23.85 56.76 48.49 63.10 4.21 7.20 18.18 4.77 9.52 30.93 21.60 81.58 19.39 11.63 5.07 17.45 15.11 41 E13a_E14a KnownJunction 0 3.41 2.70 10.97 6.99 8.06 4.83 8.04 5.59 0.00 1.64 0.00 0.00 0.00 2.06 0.00 3.93 0.00 0.00 0.00 2.88 2.53 0.00 0.00 42 E14_Aa NovelBoundary 0 135.43 252.52 317.20 174.24 170.03 114.76 291.43 192.60 243.31 162.57 67.28 48.77 52.11 21.72 68.11 226.09 105.94 184.76 95.44 124.96 57.76 33.86 79.13 43 ER14a ExonRegion 0 21.94 12.41 3.55 4.84 9.96 11.03 16.59 5.69 7.00 4.84 11.96 27.11 24.20 15.44 56.67 30.97 31.22 10.97 17.78 14.71 8.76 9.22 13.50 44 E14_Da NovelBoundary 0 202.55 94.85 57.01 60.83 109.17 130.32 202.75 81.16 63.25 64.68 55.75 24.16 40.26 25.84 47.22 117.58 103.13 36.73 65.04 122.78 61.28 44.95 83.91 45 I14_AR3 ActiveIntronRegion 0 17.99 2.37 2.55 8.63 10.48 0.76 12.69 8.79 14.41 2.29 9.66 60.61 48.85 6.50 36.75 10.40 10.18 0.00 3.19 3.19 0.00 0.87 7.59 46 I14_SR2 SilentIntronRegion 0 29.60 3.39 5.07 8.45 7.64 1.12 8.57 7.08 8.56 2.47 6.14 39.74 57.02 11.84 56.35 20.41 25.66 2.21 2.38 3.37 3.88 2.35 6.95 47 I14_AR4 ActiveIntronRegion 0 38.19 7.88 6.06 5.01 8.42 1.24 9.22 3.45 9.11 3.37 5.89 28.13 38.55 6.85 57.23 18.87 14.95 1.66 0.67 3.44 2.11 3.60 5.05 48 E15_Aa NovelBoundary 0 13.93 14.47 16.97 5.39 12.65 0.00 10.64 0.00 8.54 6.61 2.21 60.02 55.68 18.84 77.01 27.94 48.06 5.14 4.24 0.00 2.53 6.12 12.12 49 ER15a ExonRegion 0 8.26 1.38 1.36 0.00 10.67 0.14 3.04 0.60 2.36 1.53 9.78 20.47 35.90 6.04 23.71 15.12 13.77 0.23 0.51 1.34 0.33 2.83 0.00 50 E15a_E16a KnownJunction 0 3.78 0.00 1.30 0.00 0.00 0.00 2.08 2.42 0.00 1.67 13.06 6.30 13.64 2.24 4.45 7.35 3.55 0.00 0.00 0.00 0.00 0.00 0.00 51 I15 Intron 0 30.27 5.19 4.15 3.15 6.53 3.05 7.93 4.14 5.20 3.13 5.57 20.91 22.28 5.34 23.86 21.09 15.55 2.45 2.12 3.42 4.76 2.43 7.65 52 I15_AR1 ActiveIntronRegion 0 50.23 6.16 3.08 3.76 6.31 3.70 8.47 5.64 7.44 3.45 7.81 17.36 13.84 6.37 28.84 22.01 22.78 3.40 0.54 3.58 9.64 2.81 10.87 53 E16_Aa NovelBoundary 0 31.86 3.09 5.17 4.83 7.64 10.90 19.87 4.31 6.37 11.87 4.69 11.55 6.49 9.89 45.12 12.65 15.90 5.51 0.00 3.26 0.00 5.51 7.77 54 ER16a ExonRegion 0 110.62 13.16 32.28 25.16 79.35 31.17 37.75 55.45 53.28 40.85 409.88 792.29 957.43 472.82 639.82 458.05 489.47 28.37 32.64 20.17 71.36 140.09 107.07 55 E16a_E17a KnownJunction 0 104.91 15.66 23.27 31.93 80.22 12.55 29.72 45.88 46.90 30.30 349.04 885.29 1127.85 452.29 680.88 488.33 469.94 26.53 21.84 23.01 94.89 117.02 82.80 56 ER17a ExonRegion 0 85.91 29.05 37.73 33.56 69.00 58.91 50.67 48.01 60.47 43.10 374.77 691.49 779.06 495.24 733.89 494.50 497.45 65.93 42.73 37.10 109.99 132.04 108.79 57 E17a_E18a KnownJunction 0 88.24 21.11 36.28 34.79 68.17 96.02 40.01 55.57 50.52 45.85 347.67 469.80 488.77 484.49 690.16 379.56 460.21 85.35 23.62 39.18 75.06 102.44 116.95 58 E17a_E19a NovelJunction 0 13.71 5.00 10.05 10.92 15.37 2.56 5.79 15.03 3.21 5.83 22.01 41.11 13.15 19.25 13.35 24.61 17.02 0.00 11.95 3.07 3.15 5.39 4.35 59 ER18a ExonRegion 0 233.52 65.92 72.76 44.57 85.06 60.43 45.61 67.48 76.85 56.14 397.12 493.84 631.72 457.06 876.51 503.69 460.19 74.79 40.02 46.35 112.36 140.73 97.81 60 E18a_E19a KnownJunction 0 351.99 134.65 128.23 77.78 169.69 57.58 84.22 107.98 84.84 82.25 541.87 1046.29 1008.05 645.24 1538.79 638.46 529.97 80.59 51.48 83.80 110.40 191.17 99.02 61 ER19a ExonRegion 0 295.48 112.32 112.40 63.14 163.80 80.88 81.46 112.72 101.54 84.77 502.49 962.41 961.23 542.66 1308.44 555.77 540.61 67.60 54.40 71.45 107.70 187.55 117.36 62 E19a_E20a KnownJunction 0 503.50 183.65 174.33 117.93 216.30 69.16 88.24 157.48 135.27 114.03 593.31 953.11 1160.48 605.87 2047.23 974.62 616.83 145.71 77.08 107.06 134.06 353.62 216.14 63 E20_Aa NovelBoundary 1 11.19 0.00 7.89 3.93 0.00 0.00 6.23 1.73 2.89 1.56 5.16 25.21 13.31 29.49 70.34 365.97 28.24 4.06 0.00 0.00 5.99 0.00 7.77 64 ER20a ExonRegion 0 386.63 104.99 142.79 93.31 127.95 64.03 67.40 120.91 114.99 86.11 548.77 825.43 949.69 612.65 1715.01 708.99 648.27 106.80 70.08 68.94 143.44 242.37 126.68 65 E20a_E21a KnownJunction 0 389.40 103.14 139.05 73.92 90.24 76.72 79.58 82.11 101.85 52.70 384.04 745.14 884.03 426.40 1344.59 344.10 483.78 72.54 66.35 46.66 118.67 148.49 104.23 66 ER21a ExonRegion 0 554.37 132.28 150.01 98.14 145.25 100.45 85.75 118.47 114.76 85.96 405.96 684.91 849.42 487.12 1470.94 752.83 591.27 94.10 56.86 60.10 132.47 207.37 132.08 67 E21a_E22a KnownJunction 0 1535.68 217.99 205.43 145.50 226.91 112.78 169.54 160.48 152.81 114.89 623.42 745.74 1054.31 745.66 2455.66 1578.22 809.54 111.30 139.86 83.99 171.74 320.74 315.42 68 I21_SR3 SilentIntronRegion 0 54.89 8.47 6.98 10.37 18.70 5.38 12.16 12.98 11.77 4.50 26.98 41.06 41.75 19.14 61.12 31.33 26.28 8.79 3.19 6.52 8.71 4.53 0.96 69 I21_AR4 ActiveIntronRegion 0 71.74 13.75 15.34 8.99 13.34 8.35 9.68 13.80 7.25 6.49 25.37 17.89 31.83 17.78 61.87 36.98 19.23 8.03 2.50 3.74 7.89 4.46 5.14 70 E22_Aa NovelBoundary 0 447.12 54.92 27.44 21.58 49.32 33.62 25.26 28.18 19.97 6.34 47.28 30.46 109.73 37.91 141.05 67.85 17.77 10.74 0.00 6.52 16.93 14.57 11.10 71 ER22a ExonRegion 0 254.10 61.53 86.85 46.37 68.22 36.44 35.28 57.97 55.01 45.69 251.90 241.92 304.53 301.32 1106.27 347.85 290.30 40.81 30.22 22.57 80.04 100.19 67.99