Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PMM2 Gene 0 116.06 62.73 95.10 40.44 63.13 45.89 60.72 73.15 46.43 113.20 222.69 178.72 163.86 256.82 334.55 244.24 203.65 80.89 74.87 74.03 139.65 126.38 84.50 2 268261 Transcript 0 110.65 53.41 76.39 31.71 57.08 41.53 60.95 42.62 30.24 74.27 270.04 287.51 246.08 271.01 282.66 256.74 206.65 39.14 73.30 54.91 112.75 145.92 82.01 3 ER1a ExonRegion 0 178.99 116.10 25.58 7.00 33.22 41.64 77.21 12.07 8.79 26.47 57.96 20.56 21.71 73.92 126.01 122.35 75.87 12.23 33.04 36.86 50.48 65.90 40.00 4 E1a_E2a KnownJunction 1 29.04 18.29 31.28 8.39 3.31 4.20 11.13 10.93 9.32 25.22 19.27 110.29 114.12 49.03 26.58 26.32 37.12 7.71 9.51 14.76 28.91 18.55 8.11 5 ER2a ExonRegion 0 31.33 10.17 54.61 20.52 16.05 6.66 19.71 27.49 25.33 55.00 154.30 88.21 121.86 177.04 206.56 220.97 148.54 23.06 54.46 66.09 103.67 103.66 68.01 6 E2a_E3a KnownJunction 1 47.56 5.99 54.40 26.54 42.02 20.27 45.40 36.51 32.64 34.65 158.83 119.74 166.39 198.54 290.87 300.95 112.39 34.16 58.45 47.11 34.04 87.38 117.55 7 E2a_E4a NovelJunction 0 0.00 3.35 2.96 8.26 0.00 7.67 1.72 11.09 1.53 16.57 11.69 12.45 20.45 12.01 8.90 19.99 4.02 7.71 3.95 8.25 0.00 12.92 15.96 8 E2a_E5a NovelJunction 0 0.00 0.00 3.08 0.00 0.00 5.68 4.33 3.49 1.77 3.81 4.95 0.00 5.84 2.18 0.00 0.00 0.00 5.64 8.19 3.26 0.00 8.70 3.76 9 I2_SR1 SilentIntronRegion 0 6.10 11.78 4.81 4.34 4.84 3.87 12.32 8.41 4.87 18.17 3.72 10.02 15.07 4.07 14.70 13.07 4.26 2.66 9.61 19.94 9.36 6.29 14.41 10 ER3a ExonRegion 0 27.38 35.57 43.91 19.61 83.09 44.06 91.54 33.56 25.91 40.62 241.11 176.44 200.82 178.93 240.01 169.45 138.59 27.33 46.54 38.21 55.69 121.93 66.47 11 E3a_E4a KnownJunction 0 31.19 74.92 42.84 26.64 98.73 95.97 101.97 37.62 24.22 49.56 296.39 268.44 140.41 232.03 212.62 122.87 206.64 16.79 18.26 38.41 95.69 133.55 37.99 12 ER4a ExonRegion 0 76.63 87.00 46.10 20.75 59.42 37.71 75.90 42.70 24.62 57.68 304.26 296.19 224.31 228.93 225.35 183.69 235.98 22.86 44.66 38.14 101.27 110.90 49.06 13 E4_Da NovelBoundary 0 26.60 12.83 4.94 10.39 23.85 2.67 22.88 2.01 4.37 13.62 10.06 13.05 12.66 14.24 18.54 24.35 34.41 8.66 0.00 2.88 14.83 5.51 40.55 14 E4a_E5a KnownJunction 1 93.72 48.41 65.49 19.54 53.74 16.35 51.10 40.87 29.57 48.51 258.38 420.14 328.39 204.37 278.02 237.89 158.86 26.61 53.93 31.06 56.09 103.55 51.56 15 E4a_E6a NovelJunction 0 39.64 54.20 10.67 5.89 12.22 13.34 19.08 9.32 7.55 25.84 23.58 35.11 26.30 17.42 22.25 11.62 29.45 6.43 12.89 10.48 2.78 17.08 8.71 16 I4_SR2 SilentIntronRegion 0 17.79 8.89 9.14 8.84 11.58 8.43 17.29 12.20 5.50 13.71 13.36 30.39 31.85 11.32 17.06 15.68 17.86 2.49 12.93 12.70 9.84 16.19 18.67 17 E5_Aa NovelBoundary 1 25.56 24.27 13.10 7.62 8.40 5.05 10.11 9.98 11.17 29.47 12.16 53.72 74.51 12.13 23.61 35.38 16.27 11.03 9.04 21.16 2.41 17.21 11.78 18 ER5a ExonRegion 0 212.50 80.37 77.24 29.98 77.30 33.19 67.20 50.95 24.10 57.05 341.68 337.57 396.35 359.60 351.43 317.07 261.33 39.69 88.81 49.87 122.99 180.50 94.77 19 E5a_E6a KnownJunction 0 193.15 39.66 84.12 36.96 58.06 28.90 52.11 53.97 32.67 70.75 377.57 285.99 353.22 356.17 359.23 317.10 296.31 37.60 59.30 54.71 133.87 213.15 63.00 20 E6_Aa NovelBoundary 0 10.22 6.51 6.92 1.30 4.16 20.78 4.02 0.00 1.07 6.21 0.00 0.00 0.00 0.00 0.00 0.00 4.77 2.57 0.00 8.82 0.00 0.00 3.50 21 ER6a ExonRegion 0 164.20 49.15 107.16 46.75 63.44 35.78 63.72 52.51 38.82 106.22 438.92 526.88 416.73 425.84 335.67 427.48 317.10 53.97 136.38 84.32 161.94 242.68 116.42 22 E6a_E7a KnownJunction 1 171.14 50.39 150.94 68.66 58.40 68.14 63.55 57.34 49.16 140.89 396.78 626.60 462.47 409.91 421.41 428.01 303.41 69.64 160.85 91.66 195.53 223.44 165.43 23 ER7a ExonRegion 0 142.54 56.73 109.13 53.56 75.89 49.59 55.65 55.43 42.86 132.88 414.59 507.67 376.25 437.14 383.27 347.05 321.72 53.84 115.22 89.67 181.31 207.81 135.09 24 E7a_E8a KnownJunction 0 147.29 66.50 144.64 44.65 67.23 89.95 78.30 38.69 30.35 135.06 386.52 386.53 236.67 478.37 416.10 387.68 284.15 59.44 144.00 61.49 217.02 256.57 130.35 25 I7 Intron 0 12.74 14.43 10.48 11.37 16.52 9.74 19.63 15.90 10.65 19.71 4.54 11.63 12.52 4.12 11.94 14.61 14.42 21.09 10.86 19.54 11.95 5.22 13.28 26 I7_AR1 ActiveIntronRegion 0 21.53 14.36 13.33 14.13 19.24 9.10 29.95 11.63 8.57 16.06 6.33 24.98 31.93 3.38 12.74 9.20 9.92 6.68 4.82 22.21 3.38 4.61 7.74 27 I7_SR2 SilentIntronRegion 0 7.00 7.20 7.05 8.18 7.40 4.32 11.63 7.19 6.27 11.56 3.96 8.73 9.75 3.61 9.74 14.02 14.01 18.79 8.51 14.46 12.28 3.99 13.70 28 I7_SR3 SilentIntronRegion 0 26.82 46.70 23.33 24.01 49.16 32.73 42.57 53.85 29.15 54.95 6.53 14.05 11.86 7.12 13.47 15.06 12.55 48.88 17.82 40.44 11.75 8.47 11.16 29 I7_AR3 ActiveIntronRegion 0 23.75 35.33 22.76 20.85 56.49 31.04 46.88 40.06 25.59 39.73 5.93 10.19 12.04 5.11 13.01 13.16 15.88 21.72 20.96 28.74 18.46 18.40 14.40 30 I7_SR4 SilentIntronRegion 0 26.60 36.38 32.22 24.90 65.16 29.49 55.00 54.10 33.98 56.57 6.53 13.11 9.51 8.56 31.60 33.58 7.32 36.21 25.48 42.78 33.29 16.16 16.27 31 I7_AR4 ActiveIntronRegion 0 10.50 25.18 16.47 10.34 35.85 31.80 41.79 20.74 14.64 29.60 2.41 10.14 5.40 3.54 10.65 11.85 6.60 26.63 4.15 21.92 13.52 12.16 8.17 32 E8_Aa NovelBoundary 0 68.38 74.07 22.15 23.87 55.35 38.84 66.07 26.90 26.94 32.05 5.00 0.00 6.82 4.59 14.46 8.03 16.08 59.53 12.99 26.72 17.79 33.56 19.04 33 ER8a ExonRegion 0 113.12 61.90 108.41 46.10 66.30 50.53 59.70 88.62 55.23 133.43 203.96 141.33 131.49 255.32 366.75 242.30 201.78 102.23 76.13 81.30 152.67 119.29 86.40 34 IG50 Intergenic 0 32.14 21.72 27.34 24.53 32.64 28.03 35.84 49.21 32.09 66.60 12.76 28.00 33.06 30.95 45.44 38.99 30.75 50.70 26.90 40.95 11.50 12.07 19.10 35 IG50_AR1 ActiveIntergenicRegion 0 26.72 23.40 35.52 38.33 29.50 24.05 32.87 61.29 33.02 90.49 16.09 46.53 49.86 50.99 62.87 55.00 36.70 49.54 37.53 41.30 13.98 15.94 24.94 36 IG50_SR1 SilentIntergenicRegion 0 16.36 12.98 13.86 9.70 19.87 21.51 20.87 34.76 20.51 33.52 8.02 7.63 7.80 9.36 10.15 16.15 10.60 52.56 10.10 35.34 8.14 3.49 11.94 37 IG50_AR2 ActiveIntergenicRegion 0 22.05 17.52 12.37 18.59 31.18 29.93 32.84 29.22 22.91 40.03 15.63 26.14 43.45 29.06 55.93 39.27 32.72 35.83 29.11 32.87 9.79 12.65 13.02 38 IG50_SR2 SilentIntergenicRegion 0 41.90 18.95 28.55 26.69 35.55 38.73 38.25 55.63 42.90 75.06 10.36 31.46 27.13 33.79 46.08 38.56 33.48 46.23 27.21 50.28 14.28 15.19 19.51 39 IG50_AR3 ActiveIntergenicRegion 0 32.72 19.84 32.10 26.61 34.21 27.94 36.12 58.46 45.35 94.67 15.01 15.12 24.95 37.71 53.40 47.81 44.45 77.17 30.15 49.16 13.52 14.82 22.26 40 IG50_SR3 SilentIntergenicRegion 0 34.92 26.45 27.25 21.41 35.37 25.36 40.20 43.73 24.44 52.30 12.32 29.70 37.48 23.63 41.22 34.18 25.30 43.82 24.64 34.96 9.20 9.56 17.89