Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DNAJA3 Gene 0 90.01 85.58 128.15 78.35 82.19 79.07 65.15 73.88 70.29 110.45 205.79 151.17 105.45 419.07 412.63 287.47 252.25 110.75 103.48 93.39 132.69 103.95 91.50 2 262375 Transcript 0 28.31 22.75 29.84 18.23 22.81 14.81 17.16 14.64 13.43 22.02 46.71 22.44 19.52 81.24 102.77 55.20 56.73 33.09 20.24 18.44 28.46 13.37 26.36 3 355296 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 431375 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 ER1a ExonRegion 0 0.00 0.08 0.00 0.00 0.00 0.00 0.00 0.00 0.09 0.00 0.00 0.00 0.00 1.59 2.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 4.45 3.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 E1_Ac KnownBoundary 0 25.78 15.06 2.60 0.00 32.60 47.59 40.10 1.60 4.25 3.33 25.43 0.00 6.66 152.81 234.13 97.24 31.14 24.71 11.48 10.99 24.83 0.00 39.18 8 ER1b ExonRegion 0 12.43 9.07 2.81 0.34 18.17 19.18 17.10 0.79 2.47 2.48 16.91 0.00 2.93 88.45 112.67 52.51 22.69 1.92 13.27 11.35 14.78 3.56 21.90 9 ER1c ExonRegion 1 27.31 14.30 32.79 13.16 28.69 38.43 22.42 16.01 24.96 50.30 113.75 16.17 21.54 248.68 238.62 166.20 168.13 44.75 103.82 51.73 73.50 49.57 66.62 10 E1a_E2a KnownJunction 1 3.41 0.00 78.89 38.22 4.33 2.50 8.83 31.30 43.69 93.13 105.03 73.97 22.24 449.41 459.98 604.54 107.25 229.20 353.23 61.81 59.92 184.07 210.59 11 E1a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER2a ExonRegion 0 28.15 43.31 76.63 42.93 77.42 92.06 57.33 58.14 60.33 104.83 177.99 230.20 160.20 408.65 332.56 359.41 205.64 171.47 135.21 74.06 113.06 88.21 106.51 13 E2a_E3a KnownJunction 1 61.64 78.80 111.62 46.88 102.46 164.68 104.09 53.03 65.45 123.83 229.74 288.84 86.20 410.50 385.81 225.58 287.89 95.84 128.00 75.29 183.66 106.85 56.51 14 ER3a ExonRegion 0 63.32 73.69 104.27 52.44 68.23 83.39 66.32 68.93 79.62 123.99 256.85 255.90 178.11 561.15 368.80 274.11 312.52 110.36 91.96 73.23 162.21 112.83 75.62 15 E3_Da NovelBoundary 0 16.08 7.83 16.08 21.38 36.59 2.16 8.79 9.82 8.07 13.83 2.11 41.71 39.93 121.08 43.14 25.29 21.79 16.62 0.00 12.40 11.80 2.63 0.00 16 E3a_E4a KnownJunction 1 57.27 82.09 115.46 57.27 36.59 72.69 49.90 85.11 87.99 127.84 268.28 340.61 207.78 432.46 153.66 360.50 330.81 114.70 102.50 67.11 200.47 146.41 77.42 17 I3 Intron 0 22.86 10.24 13.05 11.38 20.22 6.81 13.96 9.33 7.47 9.74 6.57 14.15 17.68 87.16 57.82 35.56 20.37 12.38 14.74 12.19 8.05 7.15 10.08 18 I3_AR1 ActiveIntronRegion 0 17.21 3.74 8.75 9.74 11.83 5.42 9.30 3.81 2.04 4.38 1.39 23.62 18.62 87.14 80.77 18.67 15.83 9.51 18.84 11.01 9.77 2.31 6.51 19 I3_AR2 ActiveIntronRegion 0 39.78 14.14 15.40 11.52 46.75 10.23 23.67 17.12 12.36 16.46 15.33 24.54 34.18 107.12 63.16 47.01 31.70 14.46 25.95 11.75 9.58 15.52 17.60 20 I3_AR3 ActiveIntronRegion 0 17.17 10.46 8.25 10.79 24.55 6.09 15.14 3.10 5.14 6.09 1.70 13.06 19.55 60.94 38.99 20.70 10.83 2.61 3.92 4.41 2.53 5.37 6.50 21 I3_SR2 SilentIntronRegion 0 21.53 10.42 15.18 12.64 15.72 6.46 12.14 9.83 7.76 10.10 6.35 10.00 13.63 87.99 57.43 36.48 20.56 14.82 13.17 15.11 9.26 5.62 8.75 22 ER4a ExonRegion 0 41.30 52.30 95.91 50.00 41.47 42.39 40.20 71.55 67.88 124.17 218.12 271.74 142.34 421.84 309.60 267.65 298.13 108.54 100.17 87.02 155.36 113.17 75.80 23 E4_Ab KnownBoundary 0 57.86 77.68 161.70 74.92 62.82 66.95 54.59 110.12 95.57 144.62 320.71 283.59 156.16 578.73 494.84 424.25 348.67 168.18 158.78 102.01 197.87 109.24 140.59 24 ER4b ExonRegion 0 60.12 60.36 127.76 76.05 82.72 92.04 57.16 96.92 90.75 160.97 333.50 190.12 132.88 759.92 464.28 471.66 394.82 216.00 187.20 88.37 191.85 137.51 156.83 25 E4a_E5a KnownJunction 0 77.20 81.76 120.96 63.96 110.10 143.50 108.51 78.70 87.12 181.86 360.20 229.27 149.34 626.64 486.06 453.81 454.51 182.77 135.06 94.21 184.28 133.98 145.63 26 ER5a ExonRegion 0 59.29 89.66 113.97 66.58 85.27 95.20 76.64 71.33 75.95 127.58 241.17 218.00 151.61 507.97 428.19 321.94 326.49 148.44 106.85 112.11 176.35 99.85 104.28 27 E5_Da NovelBoundary 0 7.41 12.17 4.55 26.17 15.70 0.00 0.00 0.00 8.85 3.73 2.42 0.00 0.00 19.48 13.35 11.96 15.99 13.68 17.98 0.00 9.39 5.27 3.67 28 E5a_E6a KnownJunction 0 121.80 131.69 122.17 38.19 89.39 85.97 89.30 76.56 80.41 103.36 231.37 162.95 218.98 731.65 568.64 425.87 335.95 132.24 160.76 84.69 185.83 85.24 140.08 29 I5 Intron 0 20.47 12.18 10.16 29.54 12.59 5.96 12.92 14.33 11.50 10.09 5.79 16.87 21.11 18.94 18.06 23.91 13.56 12.88 8.99 12.02 8.86 11.59 6.53 30 I5_AR1 ActiveIntronRegion 0 20.53 12.22 10.19 29.64 12.64 5.98 12.96 14.38 11.54 10.12 5.81 16.92 21.18 19.01 18.13 23.99 13.60 12.93 9.03 12.05 8.89 11.62 6.56 31 E6_Aa NovelBoundary 1 46.82 32.43 4.44 40.15 15.87 21.41 44.69 7.76 8.48 11.90 8.05 25.21 52.59 20.19 35.60 12.22 15.80 1.53 18.26 18.41 6.18 7.53 8.37 32 ER6a ExonRegion 0 80.17 120.75 147.96 82.91 69.70 85.99 61.15 80.02 73.13 102.47 230.93 265.44 179.14 493.22 421.41 307.49 275.49 138.03 94.76 131.71 174.12 106.03 93.46 33 E6a_E7a KnownJunction 0 104.98 117.28 223.53 126.86 145.76 137.88 109.48 96.81 87.85 123.40 285.18 291.24 162.16 508.98 570.37 397.08 262.74 177.46 120.85 126.62 197.50 158.96 151.01 34 E7_Aa NovelBoundary 0 3.11 3.35 0.00 4.20 3.57 0.00 28.75 2.46 1.19 1.67 2.32 6.30 0.00 0.00 0.00 3.59 0.00 3.77 0.00 0.00 0.00 0.00 0.00 35 ER7a ExonRegion 0 90.65 94.39 197.44 109.22 100.16 107.29 95.16 99.45 93.01 121.84 275.01 228.20 174.83 538.13 525.53 394.88 350.86 181.76 115.21 142.03 183.08 124.50 129.84 36 E7a_E8a KnownJunction 0 110.98 133.53 217.76 125.16 92.53 121.92 116.85 123.80 127.81 140.51 311.55 272.19 219.30 654.31 606.84 456.80 426.27 205.77 134.59 193.03 230.00 164.23 153.57 37 ER8a ExonRegion 0 96.54 88.71 198.40 112.15 67.27 116.40 79.05 94.66 94.59 134.49 214.78 190.33 153.28 490.06 464.31 315.30 309.36 154.42 120.23 141.98 177.68 117.53 104.17 38 E8a_E9a KnownJunction 0 122.98 121.69 207.15 104.38 104.50 161.73 103.21 114.97 89.24 96.14 174.36 131.59 112.82 476.84 481.00 304.11 377.37 141.11 63.15 174.37 184.03 116.47 131.03 39 ER9a ExonRegion 0 99.42 108.24 162.98 95.12 88.14 93.54 68.18 83.86 72.13 105.77 213.55 155.15 132.33 453.20 495.64 323.17 318.99 132.26 124.48 123.22 175.84 100.92 89.26 40 E9a_E10a KnownJunction 0 115.58 87.16 167.88 96.86 47.71 60.87 53.66 67.53 67.48 107.99 167.67 159.50 78.08 398.67 380.74 315.73 237.31 95.80 94.31 106.93 147.90 107.10 102.52 41 I9 Intron 0 20.66 8.91 11.10 11.53 13.59 8.40 10.29 8.98 7.88 9.54 12.32 5.56 8.88 25.15 28.41 28.72 17.10 7.87 13.64 12.50 9.22 6.23 7.31 42 I9_AR2 ActiveIntronRegion 0 23.72 10.23 12.74 13.24 15.60 9.65 11.81 10.31 9.05 10.95 14.15 6.39 10.19 28.72 32.37 32.97 19.64 9.03 15.66 14.35 10.58 7.14 8.40 43 ER10a ExonRegion 0 102.46 64.14 153.78 65.07 53.02 88.73 72.13 77.67 71.42 99.96 211.22 151.31 100.60 423.17 482.61 278.96 283.37 121.31 76.45 103.58 160.96 93.14 102.90 44 E10a_E11a KnownJunction 0 30.97 22.96 47.78 41.79 7.30 7.55 14.26 19.22 23.18 36.64 64.86 38.41 27.27 93.83 168.49 57.34 72.74 59.03 16.75 34.90 39.91 13.66 42.60 45 E10a_E12a KnownJunction 0 88.24 68.61 105.20 49.31 72.58 54.12 78.87 48.80 42.97 65.30 170.83 143.15 78.08 300.49 401.63 217.55 226.09 62.93 47.91 89.36 121.15 53.09 51.47 46 ER11a ExonRegion 0 36.13 29.81 58.03 18.28 32.36 29.45 28.74 27.20 21.59 39.77 78.82 42.89 34.07 149.24 157.88 98.89 92.34 49.98 54.12 25.68 46.22 24.95 35.74 47 E11a_E12a KnownJunction 0 71.64 60.25 43.40 29.27 66.38 35.21 32.64 25.63 19.39 33.68 89.86 30.91 33.11 158.28 175.78 111.85 114.17 55.22 30.31 31.64 56.16 24.06 53.44 48 ER12a ExonRegion 0 129.47 113.02 153.26 104.41 110.45 86.67 78.93 88.89 81.74 127.03 224.62 132.90 91.53 434.21 483.50 310.80 253.88 103.57 106.00 99.07 129.66 124.66 98.20 49 ER12b ExonRegion 0 2.82 0.68 0.00 1.82 8.03 1.83 10.15 1.15 2.88 0.00 0.00 0.00 3.13 3.25 9.67 7.93 4.40 1.23 0.00 0.00 0.00 4.17 0.00 50 IG15 Intergenic 0 7.60 2.70 15.33 3.76 15.49 9.23 9.75 9.84 8.42 12.36 1.42 4.56 3.50 3.10 5.78 7.55 6.42 7.96 10.50 4.77 4.94 2.43 7.39 51 IG15_AR1 ActiveIntergenicRegion 0 7.80 3.00 17.22 5.09 16.17 5.41 10.34 9.49 8.95 16.38 0.57 2.10 2.28 3.32 4.05 3.07 5.84 8.66 7.98 3.44 2.60 3.38 5.19 52 IG15_SR1 SilentIntergenicRegion 0 7.63 2.66 15.11 3.55 15.49 10.01 9.72 9.99 8.39 11.71 1.58 5.05 3.75 3.07 6.15 8.44 6.58 7.90 11.05 5.05 5.41 2.28 7.86