Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HMOX2 Gene 0 91.17 70.93 130.99 44.23 54.56 89.82 42.48 78.37 63.19 75.10 187.32 46.91 29.29 165.87 223.06 146.11 105.91 77.29 50.56 79.38 95.09 57.96 50.01 2 406590 Transcript 0 0.00 0.00 3.09 0.00 1.05 2.52 1.04 2.81 0.00 0.93 6.11 4.79 6.94 2.48 2.16 2.93 2.78 0.01 2.50 1.85 0.00 0.46 0.00 3 458134 Transcript 0 0.43 1.02 0.58 0.00 0.68 1.59 0.61 0.01 0.03 0.47 1.21 0.01 0.00 0.34 0.91 0.86 2.19 0.09 0.17 0.17 0.11 0.28 0.00 4 219700 Transcript 1 123.15 82.52 65.59 7.04 42.87 24.20 28.68 48.98 28.54 31.59 144.74 5.85 13.64 59.72 106.00 101.68 52.45 30.14 34.21 34.68 37.86 25.90 22.08 5 398595 Transcript 0 9.56 9.41 17.20 4.09 2.80 2.64 7.45 15.30 13.66 5.86 31.26 4.98 12.50 20.50 22.44 27.14 29.90 12.10 14.93 20.53 12.38 5.77 5.53 6 414777 Transcript 0 2.22 2.44 1.37 1.52 1.20 0.00 2.38 1.55 3.59 1.03 0.86 3.59 0.58 1.36 2.83 2.67 1.00 2.21 0.48 1.92 1.32 0.63 0.88 7 ER1a ExonRegion 0 0.00 0.00 2.31 0.00 2.10 5.05 2.08 1.34 0.00 0.54 4.80 1.93 0.90 2.61 4.33 5.85 0.79 0.03 5.00 1.01 0.00 0.91 0.00 8 E1a_E5a KnownJunction 0 0.00 0.00 3.87 0.00 0.00 0.00 0.00 4.27 0.00 1.32 7.42 7.65 12.99 2.35 0.00 0.00 4.77 0.00 0.00 2.68 0.00 0.00 0.00 9 ER2a ExonRegion 0 0.00 2.54 1.68 0.00 0.60 4.22 1.09 0.00 0.00 0.32 2.80 0.00 0.00 0.24 2.61 2.38 3.05 0.28 0.48 0.48 0.33 0.00 0.00 10 E2_Ab KnownBoundary 0 0.00 6.51 4.55 0.00 3.31 11.64 4.02 0.00 0.00 1.58 5.05 0.00 0.00 0.00 0.00 7.86 4.21 0.00 3.86 2.49 2.66 0.00 0.00 11 ER2b ExonRegion 0 50.08 54.99 24.98 9.80 42.93 186.81 40.20 1.95 1.97 11.13 43.59 2.03 0.00 28.54 36.73 46.86 26.83 22.96 32.87 30.56 46.70 28.02 40.05 12 E2_Ac KnownBoundary 1 196.03 143.20 70.52 35.63 143.55 454.23 98.92 27.85 13.86 36.72 116.56 6.30 6.33 37.61 105.82 162.01 62.83 99.28 89.51 80.86 106.44 86.83 125.74 13 ER2c ExonRegion 1 222.03 182.22 83.85 16.98 104.13 194.95 92.81 40.07 22.56 43.13 260.12 6.60 13.99 90.34 360.99 205.42 155.52 41.62 78.02 53.75 131.36 94.07 92.48 14 E2_Da KnownBoundary 0 7.26 3.35 1.83 0.00 0.00 2.90 0.00 0.00 0.00 4.22 2.68 0.00 0.00 0.00 0.00 0.00 0.00 4.39 0.00 0.00 0.00 2.88 0.00 15 E2a_E3a KnownJunction 0 11.04 16.18 14.37 0.00 3.48 2.90 6.49 20.99 7.75 2.79 30.32 0.00 12.99 23.96 19.66 28.45 35.34 7.54 4.61 15.34 12.23 0.00 0.00 16 E2a_E5a KnownJunction 1 244.19 165.04 131.19 14.08 85.74 46.56 57.37 97.96 57.09 63.18 287.55 11.70 27.27 119.43 212.00 203.37 104.91 60.27 68.43 69.35 73.52 51.80 41.23 17 ER2d ExonRegion 0 1.29 0.52 0.06 0.00 1.43 0.57 0.72 0.02 0.09 1.10 0.82 0.04 0.00 0.77 0.12 0.21 3.51 0.00 0.03 0.02 0.00 0.84 0.00 18 E2b_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 I2_SR3 SilentIntronRegion 0 15.40 7.22 8.76 5.47 12.10 7.05 11.81 10.03 8.88 7.70 1.97 15.83 12.40 3.23 5.17 8.42 4.13 1.25 1.66 8.31 0.92 2.08 2.26 20 E3_Aa NovelBoundary 1 13.93 17.56 17.33 5.79 19.69 2.50 13.91 8.87 12.33 9.75 0.00 0.00 23.70 4.89 9.64 7.01 3.93 11.90 4.24 2.68 10.56 0.00 14.60 21 ER3a ExonRegion 0 11.35 8.89 10.55 3.27 4.92 2.25 10.47 10.78 9.11 4.94 18.23 7.30 10.89 11.12 11.43 14.94 16.48 9.07 13.25 16.86 10.89 5.81 4.13 22 E3_Da NovelBoundary 1 64.23 24.27 23.77 20.91 18.00 2.38 34.49 25.71 36.02 20.71 13.32 42.31 13.64 7.24 23.86 32.30 26.65 25.62 25.41 10.55 17.92 7.65 32.78 23 E3a_E5a KnownJunction 0 6.30 3.16 26.67 8.99 0.00 2.78 5.39 14.13 24.13 9.86 45.22 7.65 13.64 26.43 36.22 38.02 37.87 19.69 26.92 29.40 14.02 11.51 12.46 24 I3_AR1 ActiveIntronRegion 0 30.40 14.54 4.91 5.88 9.68 1.54 6.18 15.10 9.05 8.64 3.10 9.97 17.95 2.94 17.00 18.55 6.27 3.27 4.47 11.56 1.60 0.00 0.56 25 ER4a ExonRegion 0 4.44 4.88 2.74 3.04 2.41 0.00 4.77 3.09 7.18 2.06 1.72 7.18 1.16 2.72 5.67 5.35 2.00 4.41 0.96 3.84 2.64 1.26 1.76 26 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 E5_Ab NovelBoundary 0 30.82 22.30 35.54 3.80 7.39 6.36 10.95 41.24 27.86 22.67 23.58 0.00 18.02 8.65 10.14 39.82 7.11 18.90 0.00 12.14 16.56 4.47 0.00 28 ER5a ExonRegion 1 166.15 134.22 116.41 23.85 57.53 41.72 48.66 74.32 60.83 64.80 320.86 30.31 51.59 128.31 238.63 171.64 125.43 64.67 72.47 65.96 67.21 58.86 50.66 29 ER5b ExonRegion 0 82.18 68.94 187.35 47.37 44.73 58.46 30.23 101.87 77.11 112.89 336.54 62.37 45.03 184.62 217.97 193.38 167.81 88.18 88.21 103.46 131.51 72.52 65.49 30 E5a_E6a KnownJunction 0 86.53 135.37 318.97 98.42 87.10 124.08 45.13 175.96 144.33 181.16 596.57 113.89 82.95 400.32 444.16 402.46 280.69 198.81 170.08 199.04 162.17 187.44 146.23 31 ER6a ExonRegion 0 91.57 112.24 296.76 89.99 118.32 212.88 69.90 150.02 124.95 144.34 390.35 120.12 96.90 414.56 509.12 447.76 208.80 173.38 112.49 182.26 163.28 124.29 142.38 32 E6_Da NovelBoundary 0 0.00 8.29 5.26 2.06 4.33 11.75 5.74 6.37 4.98 5.91 2.68 0.00 0.00 4.47 0.00 0.00 0.00 2.57 19.86 11.25 9.08 2.69 4.27 33 E6a_E7a KnownJunction 0 141.95 146.09 298.78 117.47 205.52 316.64 108.02 127.49 101.45 150.86 390.05 123.79 93.18 247.69 339.08 236.35 257.13 97.66 65.41 99.58 214.18 106.30 61.21 34 E7_Aa NovelBoundary 0 6.82 0.00 4.26 5.43 0.00 2.90 6.32 2.51 1.45 1.67 0.00 0.00 0.00 0.00 8.90 11.02 13.74 5.84 0.00 3.00 2.41 5.33 19.89 35 ER7a ExonRegion 0 219.08 169.99 238.62 92.15 107.88 190.10 93.83 148.16 119.50 131.46 344.69 88.98 50.84 361.50 425.33 271.97 199.90 155.36 94.01 150.93 180.84 93.91 85.25 36 E7a_E8a KnownJunction 0 279.16 138.20 268.53 118.17 184.80 244.97 87.57 194.20 151.97 173.56 505.13 122.44 47.56 365.59 494.84 322.39 225.71 193.13 106.36 232.21 180.33 130.67 137.43 37 ER8a ExonRegion 0 126.61 80.65 305.90 114.57 95.65 142.17 68.77 186.92 169.44 171.99 450.00 94.70 48.34 335.43 546.62 311.49 230.54 192.78 101.05 192.26 229.50 139.74 114.88 38 E8a_E9a KnownJunction 1 88.83 82.55 258.54 95.69 73.77 114.54 56.88 166.56 138.80 149.59 429.85 93.78 12.82 346.46 489.15 203.28 283.68 136.26 93.18 183.89 247.73 117.69 77.42 39 E9_Aa NovelBoundary 0 3.70 6.31 9.64 0.00 0.00 10.16 1.77 13.47 7.87 10.40 5.37 0.00 0.00 9.71 8.90 0.00 13.46 27.36 6.96 12.27 17.30 8.14 0.00 40 ER9a ExonRegion 0 105.82 80.43 188.54 62.96 72.60 90.70 46.03 121.13 88.47 106.91 248.20 68.03 33.74 196.63 301.05 160.47 141.67 91.40 55.27 96.34 128.04 93.69 51.27 41 E9_Da KnownBoundary 0 224.48 56.77 125.16 36.69 128.27 128.34 49.20 67.61 40.45 52.86 132.35 54.62 26.30 154.92 163.79 106.30 111.64 47.75 49.70 51.01 79.51 45.99 27.57 42 ER9b ExonRegion 0 30.06 14.39 48.39 9.16 19.67 26.93 14.05 28.30 22.79 41.40 43.10 15.54 13.66 43.50 64.83 38.46 30.89 26.11 15.34 27.56 31.84 21.74 19.94 43 ER9c ExonRegion 0 2.12 0.00 0.00 0.00 0.00 1.83 0.00 0.00 0.00 0.00 1.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.20 0.00 2.94