Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CLUAP1 Gene 0 46.42 67.81 42.04 28.63 77.09 59.29 47.68 42.06 48.09 48.09 37.10 56.80 41.28 40.26 41.12 44.70 37.13 32.79 71.43 44.27 63.23 61.99 65.00 2 341633 Transcript 0 9.12 13.57 3.52 3.35 7.69 14.20 13.14 1.13 2.47 1.29 25.58 0.08 0.00 7.35 6.44 20.75 12.90 5.58 11.70 4.33 24.44 10.61 28.94 3 417763 Transcript 0 2.18 9.88 1.14 7.27 9.61 23.27 12.40 26.41 22.23 9.34 0.00 0.00 0.00 0.00 0.03 2.51 0.00 18.94 10.52 21.70 0.00 0.00 0.00 4 445795 Transcript 0 26.07 28.68 14.27 12.22 40.66 18.74 17.16 17.94 23.62 16.26 6.95 18.20 12.75 12.34 11.91 12.63 9.62 11.21 30.66 18.72 20.08 20.55 26.96 5 ER1a ExonRegion 0 9.12 13.57 3.52 3.35 7.69 14.20 13.14 1.13 2.47 1.29 25.58 0.08 0.00 7.35 6.44 20.75 12.90 5.58 11.70 4.33 24.44 10.61 28.94 6 E1_Ab KnownBoundary 1 38.60 29.40 9.52 8.79 20.88 34.58 38.77 2.01 6.86 2.28 74.55 0.00 0.00 28.84 13.35 53.06 32.35 12.73 27.01 5.75 67.52 26.45 76.83 7 ER1b ExonRegion 1 50.94 70.33 22.55 14.03 61.62 173.70 74.93 19.61 22.88 35.79 63.73 9.62 13.94 55.47 38.04 111.70 73.58 54.74 122.19 39.04 94.94 66.64 165.31 8 E1a_E2a KnownJunction 0 27.63 45.45 30.84 5.03 81.75 117.15 36.43 18.36 25.06 48.67 17.53 6.30 13.64 15.36 23.98 56.14 43.20 43.61 143.63 35.09 75.06 37.90 47.12 9 E2_Aa NovelBoundary 1 3.78 10.06 2.99 2.06 15.20 2.44 0.00 8.05 1.27 2.42 0.00 5.70 22.08 2.12 5.56 4.36 0.00 0.00 8.94 3.26 2.66 0.00 3.33 10 ER2a ExonRegion 0 8.11 18.25 21.59 11.28 23.94 26.05 12.81 15.28 25.46 34.54 59.09 11.17 20.48 24.00 12.87 33.17 67.93 19.73 49.37 29.39 86.32 27.59 40.38 11 E2a_E3a KnownJunction 1 7.56 22.36 43.35 30.93 16.47 12.78 3.71 32.65 48.29 48.84 81.97 11.85 12.50 79.35 40.92 100.91 94.06 41.70 113.13 51.13 123.55 115.12 123.01 12 ER3a ExonRegion 0 7.17 28.54 30.20 17.69 30.00 27.72 20.02 29.93 38.03 50.13 40.09 24.55 27.53 66.99 55.36 111.40 64.50 47.26 132.74 57.72 78.01 85.91 155.68 13 E3a_E4a KnownJunction 0 2.89 27.69 22.97 17.35 75.89 30.38 31.00 23.86 32.15 45.26 28.17 43.96 62.17 38.67 36.84 53.58 46.28 44.31 52.05 59.83 74.13 37.84 91.68 14 ER4a ExonRegion 0 38.11 84.55 45.67 22.20 89.79 128.63 77.21 40.51 51.04 55.31 55.10 54.84 42.39 58.21 47.26 64.99 53.35 55.89 64.57 65.60 104.54 71.67 73.11 15 E4a_E5a KnownJunction 0 63.05 137.15 64.87 27.40 47.03 90.74 71.54 38.81 60.99 64.74 72.33 71.72 66.88 67.87 70.46 55.54 44.23 58.78 51.39 69.09 134.30 90.75 71.45 16 ER5a ExonRegion 0 50.22 87.19 54.96 31.59 44.21 44.30 42.67 46.00 63.90 74.23 55.29 83.70 62.29 59.67 54.49 55.17 44.87 47.73 88.79 56.27 125.73 84.62 74.58 17 E5a_E6b KnownJunction 0 80.24 69.72 84.38 41.72 62.05 28.39 49.15 54.09 65.71 80.69 46.01 103.98 33.44 67.57 86.16 50.67 41.80 55.71 98.92 79.39 130.04 85.42 90.91 18 ER6a ExonRegion 0 11.22 9.56 7.11 4.36 7.49 4.40 5.03 4.84 6.05 7.80 4.83 7.79 7.04 7.63 7.83 6.84 4.95 4.99 12.10 6.81 12.78 8.13 9.40 19 ER6b ExonRegion 0 77.44 114.25 66.52 37.60 88.40 67.87 75.88 48.79 60.12 76.04 71.14 133.69 100.98 86.57 73.68 78.28 64.31 58.19 119.12 67.85 110.11 111.88 96.70 20 E6a_E7a KnownJunction 0 52.45 106.56 41.66 47.35 167.40 104.20 107.93 63.09 51.59 66.89 73.44 142.85 115.90 62.10 48.21 84.51 54.23 60.90 100.80 71.97 92.79 107.46 75.20 21 ER7a ExonRegion 0 55.35 113.59 64.10 42.63 94.65 92.17 83.36 62.16 52.53 81.34 64.39 148.07 96.57 59.15 55.92 54.61 60.52 32.63 76.71 51.73 52.76 107.69 57.35 22 E7a_E8a KnownJunction 0 65.34 99.52 76.40 60.03 46.86 62.24 90.67 78.08 64.64 75.54 66.12 62.57 108.43 71.16 55.38 44.69 38.15 33.66 104.29 60.02 60.05 121.61 82.03 23 ER8a ExonRegion 0 64.51 108.05 75.22 49.68 103.28 81.85 83.42 72.06 63.09 98.67 92.26 156.53 104.83 66.44 66.08 65.99 57.67 37.62 93.00 57.72 61.08 104.04 69.88 24 E8a_E9a KnownJunction 1 99.80 140.17 99.29 54.31 64.35 95.85 107.01 86.87 56.34 91.04 82.55 99.33 65.74 50.80 118.05 68.10 64.61 43.44 71.72 84.31 76.73 122.34 53.44 25 E8a_E10a NovelJunction 0 0.00 17.43 10.82 4.13 4.33 0.00 12.19 7.97 4.31 2.47 0.00 6.30 0.00 7.00 0.00 8.72 4.77 5.43 12.71 12.53 0.00 2.76 4.35 26 ER9a ExonRegion 0 55.52 104.60 76.96 44.55 74.11 91.14 62.70 59.12 63.16 79.00 51.10 126.98 78.38 63.47 82.94 70.64 52.81 42.62 77.06 58.15 99.86 89.62 47.43 27 E9a_E10a KnownJunction 0 79.13 79.00 83.17 35.79 97.28 93.01 52.33 54.38 75.35 70.14 52.86 88.38 73.86 64.39 112.00 55.63 39.74 50.66 86.03 54.84 108.17 68.70 34.32 28 I9_AR2 ActiveIntronRegion 0 15.34 4.80 4.29 2.31 0.51 3.62 6.71 0.00 2.07 1.69 0.50 10.76 7.24 2.89 6.85 5.49 6.41 3.94 6.46 1.66 5.37 5.06 5.93 29 E10_Aa NovelBoundary 0 20.37 3.35 10.88 0.00 10.53 0.00 4.24 2.55 10.88 4.46 0.00 6.30 5.84 7.42 31.03 0.00 0.00 6.05 9.60 9.20 2.78 3.12 11.95 30 ER10a ExonRegion 0 56.87 79.29 78.49 31.17 58.12 57.22 53.41 54.61 70.80 67.43 46.75 101.02 59.75 59.87 82.31 67.59 53.67 43.35 129.07 52.25 134.32 85.06 90.17 31 E10a_E11a KnownJunction 0 92.53 88.87 95.62 32.06 89.13 112.83 64.12 72.54 73.06 69.63 56.44 119.74 58.60 85.76 107.05 94.93 66.67 42.03 114.07 70.76 163.90 61.54 119.25 32 ER11a ExonRegion 0 52.01 77.38 81.27 34.88 98.67 82.62 56.03 47.07 54.94 59.00 61.61 87.59 53.10 72.65 102.99 62.47 71.03 66.78 106.99 50.15 132.46 66.75 86.26 33 E11_Da NovelBoundary 0 7.26 5.20 6.53 3.93 28.44 26.86 5.74 6.49 34.69 9.72 0.00 0.00 0.00 2.47 4.45 3.85 0.00 14.84 19.95 14.06 0.00 2.51 0.00 34 E11a_E12a KnownJunction 0 0.00 8.75 2.60 6.36 8.66 7.84 13.51 19.39 22.97 7.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.75 9.51 23.07 0.00 0.00 0.00 35 E11a_E13a KnownJunction 0 41.86 65.45 74.18 44.08 98.30 15.45 58.29 14.05 12.76 51.01 67.23 106.38 87.82 69.16 133.01 56.05 51.99 61.68 45.74 20.07 136.90 49.35 106.45 36 E12_Aa NovelBoundary 0 3.11 19.73 4.41 0.00 3.90 12.10 1.99 16.31 3.07 5.40 2.21 0.00 0.00 0.00 4.45 3.42 0.00 15.30 17.60 3.26 5.99 3.12 0.00 37 ER12a ExonRegion 0 3.56 11.42 0.82 8.30 9.06 21.94 14.10 24.77 22.08 11.71 0.00 0.00 0.00 0.00 0.10 3.44 0.00 19.55 13.58 25.42 0.00 0.00 0.00 38 E12_Da NovelBoundary 0 0.00 3.29 8.34 5.63 8.66 7.95 8.79 8.34 11.72 6.98 0.00 0.00 0.00 3.00 0.00 12.82 4.77 14.38 16.85 21.09 0.00 0.00 4.35 39 E12a_E13a KnownJunction 0 2.96 9.47 0.00 7.16 11.12 40.03 9.58 35.08 21.64 9.21 0.00 0.00 0.00 0.00 0.00 4.10 0.00 12.52 8.47 16.62 0.00 0.00 0.00 40 E13_Aa NovelBoundary 0 18.15 26.64 1.83 8.56 15.62 22.94 6.62 16.18 29.69 10.58 0.00 7.65 6.33 2.35 0.00 0.00 3.93 10.78 9.60 10.23 0.00 0.00 0.00 41 ER13a ExonRegion 0 69.96 94.37 67.37 49.27 116.10 79.01 67.96 65.45 64.19 69.79 50.58 61.47 54.95 56.21 68.34 58.40 44.59 45.34 89.16 60.22 83.39 94.66 84.70 42 E13_Da KnownBoundary 0 72.16 82.55 37.05 50.61 74.79 33.90 38.60 53.85 71.87 30.41 14.53 61.22 33.44 9.01 15.33 26.57 25.90 19.44 54.03 34.26 49.92 82.30 54.38 43 ER13b ExonRegion 0 40.92 47.81 21.44 20.09 73.82 33.08 29.29 31.04 41.19 24.73 9.07 28.61 18.46 17.05 15.98 18.41 14.28 17.43 49.22 30.63 27.38 32.98 44.52 44 IG2 Intergenic 0 39.24 89.34 15.13 18.88 62.12 12.96 14.21 25.04 33.74 19.16 3.90 17.90 16.17 8.87 9.55 9.63 5.79 12.84 26.91 21.70 15.22 21.14 27.61 45 IG2_SR1 SilentIntergenicRegion 0 35.00 83.74 14.67 11.07 30.71 10.24 12.01 30.39 20.39 12.51 4.41 17.19 30.87 3.30 1.78 1.69 2.12 4.33 8.42 9.53 9.44 27.68 16.04 46 IG2_AR2 ActiveIntergenicRegion 0 40.89 92.77 15.68 20.12 66.64 13.60 14.85 25.47 35.90 20.32 3.99 18.56 15.57 9.60 10.47 10.57 6.27 13.93 29.24 23.37 16.18 21.34 29.44