Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SOLH Gene 0 41.55 23.28 185.35 28.65 20.49 27.82 17.19 41.73 39.99 105.59 171.94 29.74 34.58 226.69 183.60 132.89 106.77 154.45 57.00 69.30 113.96 75.73 64.52 2 219611 Transcript 0 28.71 17.05 154.04 23.46 15.51 24.99 17.40 32.44 29.82 88.83 128.09 19.62 17.73 178.12 134.95 113.51 81.18 140.86 44.72 61.81 91.12 58.73 52.00 3 397687 Transcript 0 0.00 0.00 0.80 0.00 0.54 0.00 0.07 0.00 0.25 0.17 0.19 0.00 0.00 0.16 0.15 0.00 0.00 0.37 0.00 0.00 0.44 0.42 0.00 4 IG22 Intergenic 0 3.35 3.72 10.11 6.26 4.05 3.52 4.24 5.35 5.58 8.19 3.08 6.71 2.95 13.30 11.20 7.30 7.85 20.99 13.57 15.59 5.67 3.24 6.94 5 IG22_SR1 SilentIntergenicRegion 0 3.57 4.27 11.84 7.00 4.01 4.60 4.86 6.18 5.38 8.97 3.62 5.60 2.82 13.69 13.07 5.57 10.76 25.23 16.36 17.54 5.29 2.58 8.36 6 IG22_AR1 ActiveIntergenicRegion 0 5.82 7.34 15.55 13.24 9.30 6.13 5.48 7.20 7.44 13.29 4.85 14.79 8.81 17.79 19.25 13.84 8.78 26.07 16.57 22.81 8.23 5.35 7.19 7 IG22_AR2 ActiveIntergenicRegion 0 14.23 1.81 7.35 0.53 2.68 5.20 3.97 5.09 8.65 9.30 5.80 8.18 2.08 16.24 24.02 11.23 2.75 18.68 15.22 10.05 7.22 2.32 5.87 8 IG22_AR3 ActiveIntergenicRegion 0 17.69 0.00 5.34 0.00 4.59 5.50 5.11 4.07 8.12 12.70 6.35 10.82 0.00 12.06 22.80 6.16 6.37 19.14 22.75 14.13 4.88 0.45 4.61 9 IG22_AR4 ActiveIntergenicRegion 0 12.59 0.00 9.06 0.00 5.91 5.31 8.95 3.82 4.65 11.17 6.97 9.46 0.99 17.57 16.95 7.59 10.42 22.03 19.36 22.84 4.18 5.21 4.40 10 IG22_AR5 ActiveIntergenicRegion 0 5.68 0.75 10.90 0.50 5.35 5.50 6.55 1.82 3.12 9.54 5.19 9.11 4.69 17.69 23.06 9.54 5.56 23.34 11.40 15.68 6.26 11.73 9.43 11 IG22_AR6 ActiveIntergenicRegion 0 2.12 2.03 13.27 2.50 5.35 5.50 6.40 1.73 4.94 6.69 3.87 4.33 4.69 18.14 17.89 11.89 3.30 20.33 11.68 22.69 6.61 14.58 11.75 12 IG22_AR7 ActiveIntergenicRegion 0 3.52 4.41 9.96 5.79 4.52 2.64 5.02 6.09 9.13 7.95 4.07 4.85 1.12 20.13 9.72 7.76 10.46 27.21 14.98 19.18 8.49 6.14 9.96 13 IG22_AR8 ActiveIntergenicRegion 0 5.08 1.93 12.40 6.56 3.81 1.44 5.95 10.81 9.65 13.33 2.10 11.31 1.59 20.43 10.08 9.74 10.34 33.17 24.31 19.61 9.20 6.34 13.22 14 IG22_AR9 ActiveIntergenicRegion 0 0.19 3.32 18.88 5.22 1.30 2.46 6.46 3.96 9.12 15.56 1.65 15.27 2.22 26.69 5.92 22.10 3.69 26.40 24.44 24.33 6.03 5.62 17.27 15 IG22_SR2 SilentIntergenicRegion 0 1.03 1.95 8.50 1.65 1.52 2.08 5.65 4.09 4.56 10.33 2.63 7.03 0.00 13.82 7.96 10.03 3.41 15.60 12.18 16.36 5.69 0.65 8.69 16 ER1a ExonRegion 0 0.00 0.00 1.23 0.00 0.00 2.69 0.30 0.79 0.00 3.45 18.36 0.32 0.97 17.35 16.79 10.64 13.32 3.80 3.99 5.00 15.72 1.41 3.46 17 E1a_E2a KnownJunction 1 0.00 0.00 16.35 0.00 0.00 2.27 4.15 4.35 2.86 19.72 61.96 6.30 0.00 33.37 74.66 44.26 31.14 43.53 8.56 19.75 42.94 18.13 15.37 18 I1_AR2 ActiveIntronRegion 0 4.08 0.47 7.94 1.88 1.09 1.97 2.75 1.05 4.44 6.74 5.61 2.91 0.00 2.91 7.96 7.37 4.28 12.28 14.07 3.08 9.56 3.28 6.44 19 I1_AR3 ActiveIntronRegion 0 7.82 2.20 15.91 2.93 2.89 3.59 4.02 1.39 5.37 2.91 4.12 1.29 0.00 1.77 6.82 7.56 7.97 12.76 17.03 5.75 8.52 4.44 7.55 20 ER2a ExonRegion 0 4.71 0.00 15.58 0.23 0.45 0.00 1.60 8.77 2.19 15.47 38.00 2.37 3.72 72.90 68.75 47.72 42.29 37.55 19.53 9.03 49.40 12.42 12.19 21 E2_Da NovelBoundary 1 0.00 0.00 20.40 5.53 3.31 0.00 6.62 2.55 9.09 16.95 14.37 0.00 0.00 32.55 39.43 57.34 4.77 48.54 7.44 21.60 29.59 2.94 14.85 22 E2a_E3a KnownJunction 0 14.89 0.00 11.80 0.00 0.00 0.00 0.00 12.73 5.79 22.97 0.00 0.00 0.00 68.69 51.05 52.55 25.81 34.32 8.47 0.00 7.85 5.76 10.84 23 E2a_E4a NovelJunction 0 0.00 0.00 2.87 2.00 0.00 0.00 0.00 2.34 4.98 5.00 67.96 0.00 5.84 28.96 43.27 23.33 12.81 7.30 0.00 2.68 32.12 11.21 21.85 24 I2 Intron 0 7.87 3.24 29.49 5.91 3.18 3.99 7.10 4.50 8.76 18.21 22.94 7.40 4.06 49.34 48.74 25.95 24.81 76.14 21.12 43.13 23.20 12.08 19.55 25 I2_SR1 SilentIntronRegion 0 7.88 3.25 29.52 5.92 3.19 4.00 7.11 4.50 8.77 18.23 22.97 7.41 4.07 49.39 48.79 25.98 24.84 76.21 21.14 43.18 23.22 12.09 19.57 26 ER3a ExonRegion 0 11.18 1.82 28.74 4.46 2.18 2.56 5.31 6.96 6.11 22.22 19.28 6.72 0.00 106.08 61.41 44.27 36.98 72.73 22.21 39.92 28.74 12.17 11.46 27 E3a_E4a KnownJunction 0 3.70 0.00 1.80 0.00 0.00 0.00 2.25 2.55 1.79 1.48 0.00 0.00 0.00 9.89 8.90 0.00 21.22 1.95 0.00 0.00 0.00 0.00 0.00 28 I3 Intron 0 18.00 8.77 69.00 9.99 8.69 10.61 14.48 15.15 14.17 42.25 32.37 12.16 7.03 104.38 64.80 45.85 40.92 105.31 32.55 53.39 34.14 22.27 28.71 29 I3_SR1 SilentIntronRegion 0 11.50 9.44 27.68 6.24 6.31 4.44 11.11 8.75 8.20 18.10 20.27 9.40 4.61 55.30 45.62 20.68 22.13 77.96 27.52 40.71 21.80 15.03 24.20 30 I3_AR1 ActiveIntronRegion 0 15.56 12.68 30.89 6.49 8.97 6.74 15.58 5.90 12.21 28.54 21.83 6.75 0.00 84.26 53.33 29.55 21.55 98.75 9.18 75.59 34.29 19.00 27.73 31 I3_SR2 SilentIntronRegion 0 14.09 5.94 33.82 7.97 11.13 6.73 18.13 7.63 7.45 25.76 23.39 4.80 4.71 73.95 37.64 34.45 34.74 67.26 42.72 54.24 35.03 20.05 31.11 32 I3_AR2 ActiveIntronRegion 0 27.88 8.36 61.80 11.90 9.14 10.98 18.28 15.38 16.35 41.94 33.57 15.27 10.88 140.66 101.68 54.88 55.02 127.20 41.21 72.17 36.86 23.25 33.16 33 I3_SR3 SilentIntronRegion 0 10.53 6.35 56.80 7.11 6.26 8.74 10.85 12.01 12.67 39.81 30.31 10.57 5.49 88.12 43.63 38.91 32.31 88.35 25.78 39.24 31.18 20.06 24.75 34 I3_AR3 ActiveIntronRegion 0 25.57 14.97 115.98 11.09 14.72 18.40 18.45 23.60 17.24 56.99 32.91 8.56 1.97 100.46 63.95 52.09 47.27 132.04 43.42 53.54 38.05 26.63 32.52 35 I3_SR4 SilentIntronRegion 1 26.09 20.30 173.11 21.76 17.62 20.37 19.79 33.65 19.16 69.40 50.33 16.76 7.80 112.66 76.29 69.45 50.54 137.97 34.43 72.77 46.07 33.90 34.94 36 E4_Aa NovelBoundary 0 13.34 6.12 113.92 18.91 7.89 19.36 6.49 10.51 8.10 41.29 24.85 18.61 0.00 30.08 49.69 29.56 25.62 104.17 30.02 49.79 23.48 12.12 15.96 37 E4_Ab NovelBoundary 0 24.15 9.60 114.28 16.02 8.06 10.62 3.93 17.46 32.73 70.86 58.75 6.30 12.50 153.28 81.83 78.36 36.93 99.57 44.14 91.34 53.19 38.09 56.51 38 ER4a ExonRegion 0 6.07 3.54 41.82 4.33 0.12 2.07 3.63 7.74 12.30 18.35 28.07 3.39 2.24 88.06 45.16 39.41 21.53 32.30 18.70 42.46 33.92 21.38 17.88 39 ER4b ExonRegion 0 20.44 12.84 151.35 18.41 12.54 23.71 14.04 29.67 32.60 91.64 164.13 23.20 23.88 230.59 160.72 123.43 110.34 161.98 59.80 56.47 119.57 64.34 58.61 40 E4_Da KnownBoundary 0 13.56 28.22 269.95 42.29 4.16 35.77 42.88 62.47 56.91 147.82 204.68 43.06 40.58 306.55 184.68 160.73 141.19 263.27 70.78 66.28 112.62 50.76 67.35 41 ER4c ExonRegion 0 17.10 14.71 149.80 16.76 13.25 26.59 14.59 29.08 34.02 84.09 148.67 32.37 34.40 221.55 145.28 105.51 95.59 151.48 54.46 51.63 110.67 65.99 61.13 42 E4b_E5a KnownJunction 0 37.93 22.10 189.91 34.96 32.09 48.61 29.77 44.28 42.30 118.17 216.95 42.01 25.81 318.74 179.12 175.85 155.31 244.45 112.66 85.33 140.11 91.36 102.18 43 ER5a ExonRegion 0 16.71 20.24 220.94 31.91 23.72 33.95 17.06 45.45 39.34 117.01 194.78 36.73 31.21 266.83 180.96 133.80 132.97 177.69 61.38 86.52 135.06 76.47 68.39 44 E5a_E6a KnownJunction 0 10.67 24.40 268.65 53.84 10.78 40.77 41.82 42.72 41.58 128.43 150.41 31.81 14.77 230.33 152.17 160.13 100.89 185.46 67.86 121.31 110.09 85.05 61.80 45 ER6a ExonRegion 0 15.75 14.49 207.47 27.07 11.46 24.24 17.15 45.25 37.70 108.79 142.59 24.68 17.28 219.80 164.27 130.13 97.39 168.39 49.46 86.75 85.21 61.18 59.93 46 E6_Da NovelBoundary 0 6.67 0.00 11.12 8.42 0.00 20.33 2.25 2.38 8.36 8.92 14.74 18.91 6.82 14.24 0.00 0.00 9.44 19.86 0.00 2.43 8.71 3.12 0.00 47 E6a_E7a KnownJunction 0 14.52 9.21 213.95 23.14 3.40 48.49 22.21 43.87 37.53 122.65 195.31 23.86 32.63 217.67 206.69 120.99 136.98 143.35 51.30 69.16 101.75 55.66 46.86 48 ER7a ExonRegion 0 35.65 25.86 203.65 26.16 25.05 43.57 20.95 52.78 48.94 121.60 177.42 33.94 22.57 239.26 174.00 172.98 115.84 214.78 77.56 75.76 137.28 87.60 99.30 49 E7_Da NovelBoundary 0 6.82 2.83 31.40 1.50 3.99 2.50 0.00 11.38 4.11 31.46 7.26 6.30 6.33 26.61 8.90 4.10 12.81 31.79 9.32 3.13 12.85 12.68 12.46 50 E7a_E8a KnownJunction 0 43.56 29.60 197.72 52.64 34.97 56.39 35.07 49.62 49.83 129.39 166.78 42.46 38.31 242.57 147.10 226.44 134.83 202.58 57.60 63.85 124.48 102.32 94.58 51 ER8a ExonRegion 0 42.25 27.91 199.69 29.72 21.45 34.20 20.09 52.44 47.90 115.13 198.95 27.49 31.38 241.19 172.33 164.58 114.12 216.08 75.18 76.85 156.48 78.02 93.04 52 E8a_E9a KnownJunction 0 57.64 43.28 226.49 44.42 49.66 42.87 27.38 58.08 41.98 143.95 221.00 31.81 38.63 292.19 196.55 222.33 132.30 233.01 79.63 110.32 187.86 75.01 73.92 53 ER9a ExonRegion 0 31.51 22.10 206.70 27.83 20.95 28.32 17.61 45.85 35.14 108.46 188.83 22.18 17.41 236.23 184.88 125.92 96.22 147.68 44.41 83.35 120.77 62.93 61.00 54 E9_Da NovelBoundary 0 16.52 3.35 68.18 12.89 18.85 9.71 1.94 12.57 12.99 25.30 9.95 0.00 0.00 21.19 38.20 26.83 16.36 41.00 12.80 9.20 31.07 11.45 35.08 55 E9a_E11a KnownJunction 0 42.75 17.56 231.98 33.56 24.11 21.24 22.43 47.03 39.50 154.35 198.47 18.91 34.09 208.72 179.86 158.76 73.96 235.79 68.52 101.18 105.02 116.10 74.27 56 I9_SR1 SilentIntronRegion 0 10.66 1.92 25.27 4.47 3.37 5.77 3.33 2.43 6.37 11.30 7.91 0.00 3.65 28.52 16.12 22.44 14.53 15.33 4.01 5.36 13.17 9.17 12.00 57 E10a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58 ER10a ExonRegion 0 0.00 0.00 1.59 0.00 1.07 0.00 0.13 0.00 0.49 0.34 0.39 0.00 0.00 0.32 0.29 0.00 0.00 0.74 0.00 0.00 0.88 0.83 0.00 59 E11_Aa NovelBoundary 0 13.41 0.00 42.49 0.00 12.73 2.73 8.83 13.51 23.26 32.91 9.58 0.00 0.00 23.72 25.22 32.90 12.90 30.22 17.32 9.40 32.19 27.37 12.72 60 ER11a ExonRegion 0 46.55 28.55 234.64 30.60 17.26 41.95 21.22 36.76 42.63 139.86 166.17 25.52 23.65 240.00 204.50 147.49 88.35 208.15 43.28 87.82 118.91 76.29 72.29 61 E11a_E12a KnownJunction 1 71.20 27.69 346.68 46.05 31.07 42.59 35.60 57.75 58.54 180.89 161.94 6.00 6.82 190.12 192.60 142.01 73.68 219.08 51.48 100.80 128.13 126.88 61.89 62 ER12a ExonRegion 0 60.42 27.39 241.18 30.61 21.15 32.33 24.65 45.73 45.80 132.94 196.07 25.43 26.57 229.92 196.64 143.23 97.19 203.82 55.70 80.69 120.05 89.06 67.21 63 E12a_E13a KnownJunction 0 93.79 40.65 234.76 43.38 23.68 23.05 31.97 33.64 40.62 119.08 176.41 24.46 18.34 276.06 226.47 147.74 102.20 200.76 41.32 78.49 124.23 88.36 79.05 64 E13_Aa NovelBoundary 0 3.48 5.72 59.52 5.86 0.00 2.21 4.20 11.71 11.43 19.07 16.43 11.70 5.84 14.72 18.67 11.96 4.77 37.18 21.84 5.82 27.55 13.53 0.00 65 ER13a ExonRegion 0 64.21 33.29 320.44 46.40 24.50 34.67 23.52 59.12 53.86 155.10 241.81 46.07 40.10 291.06 264.31 170.16 127.33 210.33 70.78 96.05 146.50 124.20 81.43 66 E13a_E14a KnownJunction 0 108.46 65.45 457.55 96.32 24.11 43.72 46.06 98.45 84.11 219.09 371.78 36.46 39.77 347.76 330.31 336.92 173.73 422.91 172.33 119.27 206.95 163.92 197.36 67 ER14a ExonRegion 0 51.13 41.93 444.15 73.58 28.52 34.19 31.32 105.10 96.95 227.34 334.37 77.71 100.46 357.74 360.91 231.18 217.08 238.40 122.56 143.55 187.54 169.74 111.49 68 E14a_E15a KnownJunction 0 29.19 31.24 522.36 117.83 51.19 25.04 27.73 140.23 112.50 276.41 285.44 94.23 132.46 323.92 350.70 207.89 179.80 463.20 143.82 138.76 177.05 127.86 163.47 69 ER15a ExonRegion 0 78.48 36.62 188.29 39.46 33.37 30.78 19.33 50.65 46.25 112.00 188.85 34.70 53.49 235.75 221.71 148.40 113.17 129.32 56.02 73.05 111.79 87.29 68.34 70 ER15b ExonRegion 0 10.58 8.13 5.51 1.36 5.35 0.92 0.66 4.32 1.24 3.44 7.73 2.16 4.69 7.31 8.70 7.43 8.25 1.85 0.00 7.45 2.20 0.00 0.00